© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g11134.t1 |
| Gene name | |
| Location | scaffold_158:29678..30714 |
| Strand | + |
| Gene length (bp) | 1036 |
| Transcript length (bp) | 822 |
| Coding sequence length (bp) | 822 |
| Protein length (aa) | 274 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 15 | 37 | 22 |
| 2 | 44 | 66 | 22 |
| 3 | 71 | 93 | 22 |
| 4 | 100 | 122 | 22 |
| 5 | 151 | 173 | 22 |
| 6 | 185 | 207 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g11134.t1 MTLSAGHRPRDPDILVMEAWGQGFLVGSLVVMIAITAANMKKGVLLHKLIVAELALALGHGTFIFLHAPAQGWYL SVTAVGLTISHSLHNVIAWMKIRGFFTPWGTLLYLITLLAAQPYWVVEIYANFAFFNRGQALYTTTRPLEPLFRD PWWIFTTCFLLYVIQRGYGCSLVQLIRISPRFGVMLLFMVFHRVAVVDMCAIRLAFVFKYLSDTIMLDDFRGALD RLRYHYHPDVPPQEATHARGRSTNRPVDCVPEASVNRPEPVCRPPDMV* |
| Coding | >Ani_SJS100_1|g11134.t1 ATGACGCTGAGTGCTGGCCATCGTCCCAGAGACCCGGACATCCTTGTCATGGAGGCGTGGGGACAAGGATTCCTG GTGGGCTCCCTTGTTGTCATGATTGCCATCACCGCGGCCAACATGAAAAAAGGGGTGCTCCTGCACAAACTCATC GTGGCAGAGCTCGCCCTGGCCCTCGGGCACGGAACGTTCATCTTTCTCCATGCGCCTGCCCAGGGCTGGTATCTT TCGGTTACGGCCGTCGGTCTCACAATTTCGCATTCCCTCCACAACGTGATTGCATGGATGAAGATTCGCGGCTTC TTCACCCCTTGGGGCACGCTACTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAGATCTAT GCCAACTTTGCCTTTTTCAACCGGGGCCAGGCATTATATACCACCACTCGGCCACTCGAGCCGCTCTTCCGGGAC CCTTGGTGGATCTTTACCACCTGCTTTCTCCTGTACGTCATCCAGCGTGGGTATGGGTGTTCGCTGGTGCAGCTG ATCCGCATTAGCCCACGTTTCGGCGTCATGCTCCTGTTCATGGTTTTCCATCGTGTTGCGGTGGTGGACATGTGT GCGATCCGGTTGGCGTTCGTTTTCAAGTACCTGAGCGACACCATCATGTTGGACGACTTCCGGGGCGCTCTGGAT CGACTGCGCTATCACTATCACCCGGACGTGCCACCGCAGGAGGCCACGCACGCTCGCGGTCGGAGTACAAACCGG CCTGTGGACTGTGTACCCGAGGCGTCTGTCAACCGCCCCGAGCCAGTATGTCGGCCACCGGACATGGTGTAA |
| Transcript | >Ani_SJS100_1|g11134.t1 ATGACGCTGAGTGCTGGCCATCGTCCCAGAGACCCGGACATCCTTGTCATGGAGGCGTGGGGACAAGGATTCCTG GTGGGCTCCCTTGTTGTCATGATTGCCATCACCGCGGCCAACATGAAAAAAGGGGTGCTCCTGCACAAACTCATC GTGGCAGAGCTCGCCCTGGCCCTCGGGCACGGAACGTTCATCTTTCTCCATGCGCCTGCCCAGGGCTGGTATCTT TCGGTTACGGCCGTCGGTCTCACAATTTCGCATTCCCTCCACAACGTGATTGCATGGATGAAGATTCGCGGCTTC TTCACCCCTTGGGGCACGCTACTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAGATCTAT GCCAACTTTGCCTTTTTCAACCGGGGCCAGGCATTATATACCACCACTCGGCCACTCGAGCCGCTCTTCCGGGAC CCTTGGTGGATCTTTACCACCTGCTTTCTCCTGTACGTCATCCAGCGTGGGTATGGGTGTTCGCTGGTGCAGCTG ATCCGCATTAGCCCACGTTTCGGCGTCATGCTCCTGTTCATGGTTTTCCATCGTGTTGCGGTGGTGGACATGTGT GCGATCCGGTTGGCGTTCGTTTTCAAGTACCTGAGCGACACCATCATGTTGGACGACTTCCGGGGCGCTCTGGAT CGACTGCGCTATCACTATCACCCGGACGTGCCACCGCAGGAGGCCACGCACGCTCGCGGTCGGAGTACAAACCGG CCTGTGGACTGTGTACCCGAGGCGTCTGTCAACCGCCCCGAGCCAGTATGTCGGCCACCGGACATGGTGTAA |
| Gene | >Ani_SJS100_1|g11134.t1 ATGACGCTGAGTGCTGGCCATCGTCCCAGAGACCCGGACATCCTTGTCATGGAGGCGTGGGGACAAGGATTCCTG GTGGGCTCCCTTGTTGTCATGATTGCCATCACCGCGGCCAACATGAAAAAAGGGGTGCTCCTGCACAAACTCATC GTGGCAGAGGTAGGTTGCGCTGTGTCTTTGGGGCGAAAGGGACGCTATCCCCTGCTGATGCGGACACTTAGCTCG CCCTGGCCCTCGGGCACGGAACGTTCATCTTTCTCCATGCGCCTGCCCAGGGCTGGTATCTTTCGGTTACGGCCG TCGGTCTCACAATTTCGCATTCCCTCCACAACGTGATTGCATGGATGAAGATTCGCGGCTTCTTCACCCCTTGGG GCACGCTACTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAGATCTATGCCAACTTTGCCT TTTTCAACCGGGGCCAGGCATTATATACCACCACTCGGCCACTCGAGCCGCTCTTCCGGTGCGGTGTCCGAGTGC GGTCCTCCTCACGCTTCGCATTGCTGATGCGAATCTAGGGACCCTTGGTGGATCTTTACCACCTGCTTTCTCCTG TACGTCATCCAGCGTGGGTATGGGTGTTCGCTGGTGCAGCTGATCCGCATTAGCCCACGTTTCGGCGTCATGCTC CTGTTCATGGTTTTCCATCGTGTTGCGGTGGTGGACATGTGTGCGATCCGGGTCGAGAATCGCCTAGGCTACCCC CGGGGATGGAGCCGTTCTGGAAGGTAAACGGCCGCCACTGACGAGAGGAAGATCAGCACTGACCCTGCTGTAGTT GGCGTTCGTTTTCAAGTACCTGAGCGACACCATCATGTTGGACGACTTCCGGGGCGCTCTGGATCGACTGCGCTA TCACTATCACCCGGACGTGCCACCGCAGGAGGCCACGCACGCTCGCGGTCGGAGTACAAACCGGCCTGTGGACTG TGTACCCGAGGCGTCTGTCAACCGCCCCGAGCCAGTATGTCGGCCACCGGACATGGTGTAA |