© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g11110.t1 |
| Gene name | |
| Location | scaffold_156:7824..8809 |
| Strand | + |
| Gene length (bp) | 985 |
| Transcript length (bp) | 924 |
| Coding sequence length (bp) | 924 |
| Protein length (aa) | 308 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04982 | HPP | HPP family | 4.9E-41 | 106 | 240 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 70 | 87 | 17 |
| 2 | 100 | 122 | 22 |
| 3 | 132 | 151 | 19 |
| 4 | 172 | 194 | 22 |
| 5 | 209 | 231 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g11110.t1 MEKNHRFRLPSGERGLLKHLDRFKFKEDYRSRLPDSISRFTGYRPPGSSPPYAPLPYPPFSWLTKIPLKYEIWFF AWVGAFGGVLLIEAIMSTSTAFRDVYNAPTIITSFGASAVLLFGVIESPVAQPRNFVFGHFLSALVGTCITRLFV LNDQYQGYLVNTHFHPSTFINGGLSMATSLLVMLVTGCAHPPSGATGLNAAVQSDIVSLSWRYLPTVLASSLIML GWALFINNLGRRRYPLHWWAAGVTFVRSPDDESHQAMRQDEEAQAAEEEREEREEGDLAVESDVDNASVEPTLTH QPRSPSS* |
| Coding | >Ani_SJS100_1|g11110.t1 ATGGAAAAGAATCACCGTTTTCGTCTTCCTAGCGGAGAACGGGGGCTCCTCAAGCATCTAGACCGATTCAAGTTC AAAGAGGACTACCGCAGCCGACTCCCAGACAGCATCTCCCGCTTCACGGGATACCGTCCTCCAGGCTCGAGTCCA CCATACGCCCCTCTCCCCTATCCCCCGTTTAGCTGGCTTACAAAGATCCCACTGAAATACGAGATATGGTTCTTT GCATGGGTTGGCGCATTCGGGGGGGTCCTCTTAATCGAGGCCATCATGTCCACGAGCACAGCGTTCCGGGACGTC TATAACGCGCCGACCATTATAACTTCCTTTGGCGCATCAGCAGTCCTCCTCTTCGGCGTCATTGAATCGCCCGTT GCGCAGCCTAGGAATTTTGTTTTCGGGCATTTTTTGTCTGCTCTTGTTGGGACGTGCATCACGCGCTTGTTTGTG CTGAACGATCAGTACCAAGGGTATTTGGTGAATACTCACTTTCATCCCTCGACTTTCATTAATGGTGGGCTGTCT ATGGCAACATCGTTGCTTGTCATGTTGGTTACTGGGTGTGCGCATCCGCCGTCCGGCGCAACAGGCCTTAACGCC GCAGTGCAATCCGACATAGTTTCTCTCTCTTGGAGATACCTACCGACAGTTCTCGCCTCATCTCTCATAATGCTC GGGTGGGCTCTTTTCATCAATAACTTAGGGCGCAGGCGCTATCCACTGCACTGGTGGGCTGCTGGAGTTACCTTT GTCCGGAGTCCGGATGATGAGAGTCACCAAGCGATGCGGCAGGACGAAGAAGCTCAAGCTGCTGAGGAAGAGCGT GAGGAGCGAGAAGAAGGGGACCTGGCGGTCGAAAGTGATGTCGATAATGCGAGTGTTGAGCCTACCCTTACTCAT CAGCCTAGGAGCCCTTCTTCTTAG |
| Transcript | >Ani_SJS100_1|g11110.t1 ATGGAAAAGAATCACCGTTTTCGTCTTCCTAGCGGAGAACGGGGGCTCCTCAAGCATCTAGACCGATTCAAGTTC AAAGAGGACTACCGCAGCCGACTCCCAGACAGCATCTCCCGCTTCACGGGATACCGTCCTCCAGGCTCGAGTCCA CCATACGCCCCTCTCCCCTATCCCCCGTTTAGCTGGCTTACAAAGATCCCACTGAAATACGAGATATGGTTCTTT GCATGGGTTGGCGCATTCGGGGGGGTCCTCTTAATCGAGGCCATCATGTCCACGAGCACAGCGTTCCGGGACGTC TATAACGCGCCGACCATTATAACTTCCTTTGGCGCATCAGCAGTCCTCCTCTTCGGCGTCATTGAATCGCCCGTT GCGCAGCCTAGGAATTTTGTTTTCGGGCATTTTTTGTCTGCTCTTGTTGGGACGTGCATCACGCGCTTGTTTGTG CTGAACGATCAGTACCAAGGGTATTTGGTGAATACTCACTTTCATCCCTCGACTTTCATTAATGGTGGGCTGTCT ATGGCAACATCGTTGCTTGTCATGTTGGTTACTGGGTGTGCGCATCCGCCGTCCGGCGCAACAGGCCTTAACGCC GCAGTGCAATCCGACATAGTTTCTCTCTCTTGGAGATACCTACCGACAGTTCTCGCCTCATCTCTCATAATGCTC GGGTGGGCTCTTTTCATCAATAACTTAGGGCGCAGGCGCTATCCACTGCACTGGTGGGCTGCTGGAGTTACCTTT GTCCGGAGTCCGGATGATGAGAGTCACCAAGCGATGCGGCAGGACGAAGAAGCTCAAGCTGCTGAGGAAGAGCGT GAGGAGCGAGAAGAAGGGGACCTGGCGGTCGAAAGTGATGTCGATAATGCGAGTGTTGAGCCTACCCTTACTCAT CAGCCTAGGAGCCCTTCTTCTTAG |
| Gene | >Ani_SJS100_1|g11110.t1 ATGGAAAAGAATCACCGTTTTCGTCTTCCTAGCGGAGAACGGGGGCTCCTCAAGCATCTAGACCGATTCAAGTTC AAAGAGGACTACCGCAGCCGACTCCCAGACAGCATCTCCCGCTTCACGGGATACCGTCCTCCAGGCTCGAGTCCA CCATACGCCCCTCTCCCCTATCCCCCGTTTAGCTGGCTTACAAAGATCCCACTGAAATACGAGATATGGTTCTTT GCATGGGTTGGCGCATTCGGGGGGGTCCTCTTAATCGAGGCCATCATGTCCACGAGCACAGCGTTCCGGGACGTC TATAACGCGCCGACCATTATAACTTCCTTTGGCGCATCAGCAGTCCTCCTCTTCGGCGTCATTGAATCGCCCGTT GCGCAGCCTAGGAATTTTGTTTTCGGGCATTTTTTGTCTGCTCTTGTTGGGACGTGCATCACGCGCTTGTTTGTG CTGAACGATCAGTACCAAGGGTATTTGGTGAATACTCACTTTCATCCCTCGACTTTCATTAATGGTGGGCTGTCT ATGGCAACATCGTTGCTTGTCATGTTGGTTACTGGGTGTGCGCATCCGCCGTAAGTTCTTCCTCACTTTCCAACC ATCAAATTTAAATGAAAGCATATTAATATGGACCAGGTCCGGCGCAACAGGCCTTAACGCCGCAGTGCAATCCGA CATAGTTTCTCTCTCTTGGAGATACCTACCGACAGTTCTCGCCTCATCTCTCATAATGCTCGGGTGGGCTCTTTT CATCAATAACTTAGGGCGCAGGCGCTATCCACTGCACTGGTGGGCTGCTGGAGTTACCTTTGTCCGGAGTCCGGA TGATGAGAGTCACCAAGCGATGCGGCAGGACGAAGAAGCTCAAGCTGCTGAGGAAGAGCGTGAGGAGCGAGAAGA AGGGGACCTGGCGGTCGAAAGTGATGTCGATAATGCGAGTGTTGAGCCTACCCTTACTCATCAGCCTAGGAGCCC TTCTTCTTAG |