© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g11093.t1 |
| Gene name | |
| Location | scaffold_155:4301..6009 |
| Strand | + |
| Gene length (bp) | 1708 |
| Transcript length (bp) | 1548 |
| Coding sequence length (bp) | 1548 |
| Protein length (aa) | 516 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 2.9E-75 | 46 | 483 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.0E-11 | 69 | 311 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 51 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 32 | 54 | 22 |
| 2 | 74 | 96 | 22 |
| 3 | 103 | 125 | 22 |
| 4 | 129 | 151 | 22 |
| 5 | 160 | 182 | 22 |
| 6 | 197 | 214 | 17 |
| 7 | 284 | 306 | 22 |
| 8 | 321 | 343 | 22 |
| 9 | 350 | 372 | 22 |
| 10 | 382 | 404 | 22 |
| 11 | 424 | 446 | 22 |
| 12 | 450 | 469 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g11093.t1 MNTPVTPKFGDQELASVLPAVTWWRSPHLRKVNLFMVILSLFSSPGGFDGSLVNGLQAMPEWVNFMEKPSSTWLG FINAVYWIGALISTPVAAWTCNRYGRRVGVWVGVIFLISGTTMGTAASSANVFTASRAVIGCGMGWVSNAAPILL SEIAYPAHRGVFGALYMVGYYLGAAVAAWVTFATQAYDGPWAWKLPILLQLLLPLIAVPGLAFIPESPRWLISRG RIEKARRILAELHTGGDTTSPLIAYEVQNIQEIIRAEYNAAASAGSMSVIKSPGNRHRLFITITLGVFAQFSGNG VVSYYLTVILRSVGVTQTRDQLLISACLQVWNVLFAAVGASLVDQIGRRILFITSASIMLTAFILISGLSGAFAT SGNGPVGIAVIPFLFIYFLGYDIALTPMFTAYTCEIWTFGLRSRGLSIVWLSAMGCTVFNTFVNPIALSAIHWKY YFVFVAVLIGYWFTAYFFYPETRGYSLEHIAGIFDGKDAKVKQGIEEKTKPMAGPVATESEDVHE* |
| Coding | >Ani_SJS100_1|g11093.t1 ATGAACACCCCTGTGACGCCAAAATTTGGCGATCAAGAACTCGCCTCAGTCTTGCCAGCTGTCACTTGGTGGCGC AGCCCTCACCTTCGCAAGGTGAATCTTTTTATGGTCATCCTATCCCTTTTTTCTTCTCCGGGCGGGTTCGATGGC TCCTTGGTCAATGGCCTGCAGGCTATGCCAGAGTGGGTCAACTTTATGGAAAAGCCATCCAGCACTTGGCTTGGC TTCATCAATGCGGTGTACTGGATTGGGGCATTAATTTCCACTCCAGTCGCTGCCTGGACGTGTAACCGATATGGC CGGCGGGTAGGAGTCTGGGTTGGGGTTATATTTCTAATATCCGGAACAACAATGGGCACTGCTGCGTCGTCCGCC AACGTCTTCACTGCGTCTCGTGCCGTGATTGGTTGTGGTATGGGATGGGTAAGCAACGCGGCTCCTATCCTACTC AGTGAGATCGCCTACCCTGCACATCGTGGTGTCTTTGGGGCACTCTACATGGTCGGCTATTACCTTGGAGCGGCC GTCGCGGCGTGGGTCACCTTCGCAACACAAGCGTATGACGGCCCCTGGGCCTGGAAATTGCCGATTCTTCTACAG CTCCTCCTTCCTCTCATAGCTGTTCCTGGTCTTGCGTTCATTCCCGAGAGCCCCCGGTGGTTGATATCTAGGGGA CGTATCGAGAAAGCTCGTAGAATTCTAGCTGAGCTACACACTGGTGGGGATACTACTTCACCTCTCATCGCGTAC GAAGTCCAGAATATTCAAGAGATTATTCGAGCGGAGTACAATGCGGCTGCTTCAGCAGGGAGCATGAGCGTTATC AAGTCCCCGGGAAACCGCCATCGGCTCTTCATCACCATTACCCTCGGGGTATTTGCACAATTTTCGGGCAACGGG GTAGTCTCCTACTACCTTACCGTGATATTAAGATCTGTCGGGGTCACACAAACGCGCGATCAGTTATTGATCTCC GCCTGCCTGCAAGTCTGGAACGTCCTTTTCGCGGCGGTTGGTGCCTCGCTGGTGGACCAAATTGGGCGGCGTATT TTGTTCATAACCTCAGCGAGCATCATGCTGACCGCGTTTATCCTGATAAGTGGGCTGTCGGGCGCCTTTGCCACC AGTGGCAACGGTCCAGTCGGTATTGCAGTTATCCCATTTCTGTTTATTTACTTCCTGGGATATGATATCGCTCTA ACGCCTATGTTCACTGCGTATACATGCGAAATCTGGACCTTTGGCCTCCGCTCACGGGGACTCAGTATCGTATGG CTGTCTGCCATGGGATGTACGGTATTCAACACGTTTGTCAACCCGATCGCCCTTTCGGCCATCCACTGGAAATAC TATTTCGTGTTCGTGGCCGTGTTGATTGGGTACTGGTTCACAGCGTATTTCTTTTACCCAGAAACTCGCGGATAC AGCCTCGAGCATATAGCCGGCATTTTTGACGGGAAAGATGCCAAAGTGAAACAAGGAATTGAAGAGAAAACTAAG CCGATGGCTGGACCAGTGGCTACAGAGTCGGAAGATGTACATGAGTAA |
| Transcript | >Ani_SJS100_1|g11093.t1 ATGAACACCCCTGTGACGCCAAAATTTGGCGATCAAGAACTCGCCTCAGTCTTGCCAGCTGTCACTTGGTGGCGC AGCCCTCACCTTCGCAAGGTGAATCTTTTTATGGTCATCCTATCCCTTTTTTCTTCTCCGGGCGGGTTCGATGGC TCCTTGGTCAATGGCCTGCAGGCTATGCCAGAGTGGGTCAACTTTATGGAAAAGCCATCCAGCACTTGGCTTGGC TTCATCAATGCGGTGTACTGGATTGGGGCATTAATTTCCACTCCAGTCGCTGCCTGGACGTGTAACCGATATGGC CGGCGGGTAGGAGTCTGGGTTGGGGTTATATTTCTAATATCCGGAACAACAATGGGCACTGCTGCGTCGTCCGCC AACGTCTTCACTGCGTCTCGTGCCGTGATTGGTTGTGGTATGGGATGGGTAAGCAACGCGGCTCCTATCCTACTC AGTGAGATCGCCTACCCTGCACATCGTGGTGTCTTTGGGGCACTCTACATGGTCGGCTATTACCTTGGAGCGGCC GTCGCGGCGTGGGTCACCTTCGCAACACAAGCGTATGACGGCCCCTGGGCCTGGAAATTGCCGATTCTTCTACAG CTCCTCCTTCCTCTCATAGCTGTTCCTGGTCTTGCGTTCATTCCCGAGAGCCCCCGGTGGTTGATATCTAGGGGA CGTATCGAGAAAGCTCGTAGAATTCTAGCTGAGCTACACACTGGTGGGGATACTACTTCACCTCTCATCGCGTAC GAAGTCCAGAATATTCAAGAGATTATTCGAGCGGAGTACAATGCGGCTGCTTCAGCAGGGAGCATGAGCGTTATC AAGTCCCCGGGAAACCGCCATCGGCTCTTCATCACCATTACCCTCGGGGTATTTGCACAATTTTCGGGCAACGGG GTAGTCTCCTACTACCTTACCGTGATATTAAGATCTGTCGGGGTCACACAAACGCGCGATCAGTTATTGATCTCC GCCTGCCTGCAAGTCTGGAACGTCCTTTTCGCGGCGGTTGGTGCCTCGCTGGTGGACCAAATTGGGCGGCGTATT TTGTTCATAACCTCAGCGAGCATCATGCTGACCGCGTTTATCCTGATAAGTGGGCTGTCGGGCGCCTTTGCCACC AGTGGCAACGGTCCAGTCGGTATTGCAGTTATCCCATTTCTGTTTATTTACTTCCTGGGATATGATATCGCTCTA ACGCCTATGTTCACTGCGTATACATGCGAAATCTGGACCTTTGGCCTCCGCTCACGGGGACTCAGTATCGTATGG CTGTCTGCCATGGGATGTACGGTATTCAACACGTTTGTCAACCCGATCGCCCTTTCGGCCATCCACTGGAAATAC TATTTCGTGTTCGTGGCCGTGTTGATTGGGTACTGGTTCACAGCGTATTTCTTTTACCCAGAAACTCGCGGATAC AGCCTCGAGCATATAGCCGGCATTTTTGACGGGAAAGATGCCAAAGTGAAACAAGGAATTGAAGAGAAAACTAAG CCGATGGCTGGACCAGTGGCTACAGAGTCGGAAGATGTACATGAGTAA |
| Gene | >Ani_SJS100_1|g11093.t1 ATGAACACCCCTGTGACGCCAAAATTTGGCGATCAAGAACTCGCCTCAGTCTTGCCAGCTGTCACTTGGTGGCGC AGCCCTCACCTTCGCAAGGTGAATCTTTTTATGGTCATCCTATCCCTTTTTTGTAAGTCACATACCTTCCTCTAC AATCTTGCATTGATGGCATTCCTAACTGAGCAGCCATAGCTTCTCCGGGCGGGTTCGATGGCTCCTTGGTCAATG GCCTGCAGGCTATGCCAGAGTGGGTCAACTTTATGGAAAAGCCATCCAGCACTTGGCTTGGCTTCATCAATGCGG TGTACTGGATTGGGGCATTAATTTCCACTCCAGTCGCTGCCTGGACGTGTAACCGATATGGCCGGCGGGTAGGAG TCTGGGTTGGGGTTATATTTCTAATATCCGGAACAACAATGGGCACTGCTGCGTCGTCCGCCAACGTCTTCACTG CGTCTCGTGCCGTGATTGGTTGTGGTATGGGATGGGTAAGCAACGCGGCTCCTATCCTACTCAGTGAGATCGCCT ACCCTGCACATCGTGGTGTCTTTGGGGCACTCTACATGGTCGGCTATTACCTTGGAGCGGCCGTCGCGGCGTGGG TCACCTTCGCAACACAAGCGTATGACGGCCCCTGGGCCTGGAAATTGCCGATTCTTCTACAGCTCCTCCTTCCTC TCATAGCTGTTCCTGGTCTTGCGTTCATTCCCGAGAGCCCCCGGTGGTTGATATCTAGGGGACGTATCGAGAAAG CTCGTAGAATTCTAGCTGAGCTACACACTGGTGGGGATACTACTTCACCTCTCATCGCGTACGAAGTCCAGAATA TTCAAGAGATTATTCGAGCGGAGTACAATGCGGCTGCTTCAGCAGGGAGCATGAGCGTTATCAAGTCCCCGGGAA ACCGCCATCGGCTCTTCATCACCATTACCCTCGGGGTATTTGCACAATTTTCGGGCAACGGGGTAGTCTCCTACT ACCTTACCGTGATATTAAGATCTGTCGGGGTCACACAAACGCGCGATCAGTTATTGATCTCCGCCTGCCTGCAAG TCTGGAACGTCCTTTTCGCGGCGGTTGGTGCCTCGCTGGTGGACCAAATTGGGCGGCGTATTTTGTTCATAACCT CAGCGAGCATCATGCTGACCGCGTTTATCCTGATAAGTGGGCTGTCGGGCGCCTTTGCCACCAGTGGCAACGGTC CAGTCGGTATTGCAGTTATCCCATTTCTGTTTATTTACTTCCTGGGATATGATATCGCTCTGTAGGTGTTTCAGC AAGCCATACATCCCATGCTCCTCTATGCTCCTCTATTGTGATTATTTTCCCTTGATGTATGCCCGGACTAATGCT TGCTGCTAGAACGCCTATGTTCACTGCGTATACATGCGAAATCTGGACCTTTGGCCTCCGCTCACGGGGACTCAG TATCGTATGGCTGTCTGCCATGGGATGTACGGTATTCAACACGTTTGTCAACCCGATCGCCCTTTCGGCCATCCA CTGGAAATACTATTTCGTGTTCGTGGCCGTGTTGATTGGGTACTGGTTCACAGCGTATTTCTTTTACCCAGAAAC TCGCGGATACAGCCTCGAGCATATAGCCGGCATTTTTGACGGGAAAGATGCCAAAGTGAAACAAGGAATTGAAGA GAAAACTAAGCCGATGGCTGGACCAGTGGCTACAGAGTCGGAAGATGTACATGAGTAA |