© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g11089.t1 |
| Gene name | |
| Location | scaffold_154:28017..29475 |
| Strand | + |
| Gene length (bp) | 1458 |
| Transcript length (bp) | 1458 |
| Coding sequence length (bp) | 1458 |
| Protein length (aa) | 486 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 4.0E-27 | 40 | 395 |
| PF03222 | Trp_Tyr_perm | Tryptophan/tyrosine permease family | 3.6E-05 | 42 | 171 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003333 | amino acid transmembrane transport | Yes |
| GO:0071705 | nitrogen compound transport | No |
| GO:0071702 | organic substance transport | No |
| GO:0008150 | biological_process | No |
| GO:0015849 | organic acid transport | No |
| GO:0055085 | transmembrane transport | No |
| GO:0051234 | establishment of localization | No |
| GO:0006865 | amino acid transport | No |
| GO:0051179 | localization | No |
| GO:1903825 | organic acid transmembrane transport | No |
| GO:0009987 | cellular process | No |
| GO:1905039 | carboxylic acid transmembrane transport | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 67 | 89 | 22 |
| 2 | 119 | 141 | 22 |
| 3 | 151 | 173 | 22 |
| 4 | 178 | 200 | 22 |
| 5 | 228 | 250 | 22 |
| 6 | 263 | 285 | 22 |
| 7 | 305 | 324 | 19 |
| 8 | 345 | 367 | 22 |
| 9 | 377 | 399 | 22 |
| 10 | 439 | 461 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g11089.t1 MHDTSPNLNSTGSQKDKTPAVPPQDVFSHEAAEVSFVGVSWQGAAILITKFQIGLGVLSLPSTFHVLGFFPGLLC FVVLALMTGVSGYVCGNARLYYPQLHNIGDAAELLFGRVARELIGVIYYVYLALVSGAAMLTTSVALNTLSDHGF CTTGFVGFICAVAFLMGTGFRSLEKVSWLGWVGVTGIILSVWTVAIACLVQDRPTAAPSAGPVDLDIRALPNTTF PQAMSAISNQLFAVGASGTFFSISAEMKQPELFTRSLICGQSFIIITDIIIASIVYGKVGQYLTSPALGSAGLLI KKISYGIALPGLIVTAVLYSHIAGKYCFVRILRGTPDLQSNTVKHWTVWIGSMLLTATLGFIMVGVVPFFDDFLS LVGALLNPVLTNIIPGLMILFYVAERPAKYNSGIPRDTVAAAMDARHWLLRALDGFRRGWKTSVVIAMAAFIILT GAIIIVAGTYATVVNIQVSYAAGDVSTVFTCADNS* |
| Coding | >Ani_SJS100_1|g11089.t1 ATGCACGACACCAGTCCCAATCTAAACAGCACCGGTAGCCAGAAGGACAAGACGCCTGCTGTACCCCCTCAGGAT GTATTCAGTCACGAAGCGGCTGAGGTCAGCTTTGTTGGTGTCTCCTGGCAGGGAGCAGCTATCCTGATCACAAAA TTCCAAATAGGCCTTGGTGTTCTCAGTCTTCCATCCACTTTTCATGTTTTGGGATTCTTCCCTGGTCTTCTCTGC TTTGTGGTCCTTGCGCTGATGACTGGGGTTTCTGGCTATGTGTGTGGGAATGCCAGACTATACTATCCGCAACTG CATAACATCGGCGATGCAGCAGAGCTTCTCTTCGGTCGAGTTGCTCGAGAGCTCATTGGTGTTATATACTATGTA TACCTGGCTTTGGTCTCTGGAGCTGCTATGCTCACCACCTCTGTTGCGCTCAACACTCTGTCCGACCATGGATTC TGCACCACGGGCTTCGTCGGCTTCATATGCGCGGTAGCCTTCCTGATGGGAACGGGATTCAGGTCATTGGAAAAG GTCTCTTGGCTAGGCTGGGTAGGAGTGACAGGGATCATCCTATCTGTCTGGACGGTTGCCATCGCTTGCCTCGTC CAGGACAGACCAACCGCAGCGCCATCCGCCGGTCCCGTTGACCTCGATATCCGAGCTCTCCCCAACACAACTTTC CCACAAGCCATGTCAGCCATCTCAAATCAACTCTTCGCTGTGGGCGCGTCGGGGACTTTTTTCTCCATATCGGCA GAAATGAAGCAGCCCGAACTGTTCACTCGTTCTCTCATCTGTGGACAATCCTTCATCATTATCACCGACATCATT ATTGCCTCTATTGTGTACGGCAAAGTTGGACAGTACCTGACAAGCCCAGCACTTGGATCAGCAGGTCTTCTTATT AAGAAAATATCCTACGGCATTGCATTACCTGGCCTCATCGTTACTGCCGTCCTGTACAGCCACATTGCTGGTAAA TATTGCTTTGTCAGAATTCTCCGGGGTACCCCTGATCTGCAGTCAAACACTGTTAAACACTGGACCGTGTGGATT GGATCTATGCTTCTAACTGCCACTCTGGGGTTCATCATGGTAGGAGTTGTGCCCTTTTTTGACGACTTCCTGAGC CTGGTCGGAGCGCTTCTGAATCCTGTTCTGACGAATATTATTCCCGGCCTTATGATCTTGTTTTATGTAGCTGAA AGACCTGCTAAATACAACTCAGGCATACCGCGCGATACTGTAGCAGCGGCTATGGATGCGAGACATTGGCTACTC CGCGCATTGGATGGTTTTCGACGTGGTTGGAAGACTAGCGTGGTGATCGCTATGGCTGCCTTCATCATTCTTACC GGAGCTATTATAATCGTTGCAGGTACTTATGCGACAGTGGTTAATATTCAGGTATCCTATGCTGCCGGCGACGTC TCCACCGTTTTTACGTGTGCGGATAATAGCTGA |
| Transcript | >Ani_SJS100_1|g11089.t1 ATGCACGACACCAGTCCCAATCTAAACAGCACCGGTAGCCAGAAGGACAAGACGCCTGCTGTACCCCCTCAGGAT GTATTCAGTCACGAAGCGGCTGAGGTCAGCTTTGTTGGTGTCTCCTGGCAGGGAGCAGCTATCCTGATCACAAAA TTCCAAATAGGCCTTGGTGTTCTCAGTCTTCCATCCACTTTTCATGTTTTGGGATTCTTCCCTGGTCTTCTCTGC TTTGTGGTCCTTGCGCTGATGACTGGGGTTTCTGGCTATGTGTGTGGGAATGCCAGACTATACTATCCGCAACTG CATAACATCGGCGATGCAGCAGAGCTTCTCTTCGGTCGAGTTGCTCGAGAGCTCATTGGTGTTATATACTATGTA TACCTGGCTTTGGTCTCTGGAGCTGCTATGCTCACCACCTCTGTTGCGCTCAACACTCTGTCCGACCATGGATTC TGCACCACGGGCTTCGTCGGCTTCATATGCGCGGTAGCCTTCCTGATGGGAACGGGATTCAGGTCATTGGAAAAG GTCTCTTGGCTAGGCTGGGTAGGAGTGACAGGGATCATCCTATCTGTCTGGACGGTTGCCATCGCTTGCCTCGTC CAGGACAGACCAACCGCAGCGCCATCCGCCGGTCCCGTTGACCTCGATATCCGAGCTCTCCCCAACACAACTTTC CCACAAGCCATGTCAGCCATCTCAAATCAACTCTTCGCTGTGGGCGCGTCGGGGACTTTTTTCTCCATATCGGCA GAAATGAAGCAGCCCGAACTGTTCACTCGTTCTCTCATCTGTGGACAATCCTTCATCATTATCACCGACATCATT ATTGCCTCTATTGTGTACGGCAAAGTTGGACAGTACCTGACAAGCCCAGCACTTGGATCAGCAGGTCTTCTTATT AAGAAAATATCCTACGGCATTGCATTACCTGGCCTCATCGTTACTGCCGTCCTGTACAGCCACATTGCTGGTAAA TATTGCTTTGTCAGAATTCTCCGGGGTACCCCTGATCTGCAGTCAAACACTGTTAAACACTGGACCGTGTGGATT GGATCTATGCTTCTAACTGCCACTCTGGGGTTCATCATGGTAGGAGTTGTGCCCTTTTTTGACGACTTCCTGAGC CTGGTCGGAGCGCTTCTGAATCCTGTTCTGACGAATATTATTCCCGGCCTTATGATCTTGTTTTATGTAGCTGAA AGACCTGCTAAATACAACTCAGGCATACCGCGCGATACTGTAGCAGCGGCTATGGATGCGAGACATTGGCTACTC CGCGCATTGGATGGTTTTCGACGTGGTTGGAAGACTAGCGTGGTGATCGCTATGGCTGCCTTCATCATTCTTACC GGAGCTATTATAATCGTTGCAGGTACTTATGCGACAGTGGTTAATATTCAGGTATCCTATGCTGCCGGCGACGTC TCCACCGTTTTTACGTGTGCGGATAATAGCTGA |
| Gene | >Ani_SJS100_1|g11089.t1 ATGCACGACACCAGTCCCAATCTAAACAGCACCGGTAGCCAGAAGGACAAGACGCCTGCTGTACCCCCTCAGGAT GTATTCAGTCACGAAGCGGCTGAGGTCAGCTTTGTTGGTGTCTCCTGGCAGGGAGCAGCTATCCTGATCACAAAA TTCCAAATAGGCCTTGGTGTTCTCAGTCTTCCATCCACTTTTCATGTTTTGGGATTCTTCCCTGGTCTTCTCTGC TTTGTGGTCCTTGCGCTGATGACTGGGGTTTCTGGCTATGTGTGTGGGAATGCCAGACTATACTATCCGCAACTG CATAACATCGGCGATGCAGCAGAGCTTCTCTTCGGTCGAGTTGCTCGAGAGCTCATTGGTGTTATATACTATGTA TACCTGGCTTTGGTCTCTGGAGCTGCTATGCTCACCACCTCTGTTGCGCTCAACACTCTGTCCGACCATGGATTC TGCACCACGGGCTTCGTCGGCTTCATATGCGCGGTAGCCTTCCTGATGGGAACGGGATTCAGGTCATTGGAAAAG GTCTCTTGGCTAGGCTGGGTAGGAGTGACAGGGATCATCCTATCTGTCTGGACGGTTGCCATCGCTTGCCTCGTC CAGGACAGACCAACCGCAGCGCCATCCGCCGGTCCCGTTGACCTCGATATCCGAGCTCTCCCCAACACAACTTTC CCACAAGCCATGTCAGCCATCTCAAATCAACTCTTCGCTGTGGGCGCGTCGGGGACTTTTTTCTCCATATCGGCA GAAATGAAGCAGCCCGAACTGTTCACTCGTTCTCTCATCTGTGGACAATCCTTCATCATTATCACCGACATCATT ATTGCCTCTATTGTGTACGGCAAAGTTGGACAGTACCTGACAAGCCCAGCACTTGGATCAGCAGGTCTTCTTATT AAGAAAATATCCTACGGCATTGCATTACCTGGCCTCATCGTTACTGCCGTCCTGTACAGCCACATTGCTGGTAAA TATTGCTTTGTCAGAATTCTCCGGGGTACCCCTGATCTGCAGTCAAACACTGTTAAACACTGGACCGTGTGGATT GGATCTATGCTTCTAACTGCCACTCTGGGGTTCATCATGGTAGGAGTTGTGCCCTTTTTTGACGACTTCCTGAGC CTGGTCGGAGCGCTTCTGAATCCTGTTCTGACGAATATTATTCCCGGCCTTATGATCTTGTTTTATGTAGCTGAA AGACCTGCTAAATACAACTCAGGCATACCGCGCGATACTGTAGCAGCGGCTATGGATGCGAGACATTGGCTACTC CGCGCATTGGATGGTTTTCGACGTGGTTGGAAGACTAGCGTGGTGATCGCTATGGCTGCCTTCATCATTCTTACC GGAGCTATTATAATCGTTGCAGGTACTTATGCGACAGTGGTTAATATTCAGGTATCCTATGCTGCCGGCGACGTC TCCACCGTTTTTACGTGTGCGGATAATAGCTGA |