Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g11086.t1
Gene name
Locationscaffold_154:22432..23370
Strand-
Gene length (bp)938
Transcript length (bp)879
Coding sequence length (bp)879
Protein length (aa) 293

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14748 P5CR_dimer Pyrroline-5-carboxylate reductase dimerisation 4.8E-24 185 288
PF03807 F420_oxidored NADP oxidoreductase coenzyme F420-dependent 2.2E-11 9 114

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g11086.t1
MAVNANLTFAVIGCGTLGTAIADAVLSPNEKTSVSVKRLIATVGTAPSKSRVEEALSQHASKVTVLTCEENSRAV
EEADIVILAVKPFKRTDVFSTPGFKEAIAGKLVLSIMAGITLAELSRLTYGEAASQRTHSFQVVRAMPNMAARIR
QAVTLYTSCTTVTPDNLEIAAWTFDQIGEVHRIPESSFDICAVLVGCAGSLLLLAIDGLLDAAVAEGVRRPEVQN
LVVNSAIGMMKLVPAGDHPGVLREKIASPGGCSIRALLELEKLGVRSAFTSAILAAAEKSKRMSSSR*
Coding >Ani_SJS100_1|g11086.t1
ATGGCAGTCAACGCAAATCTAACATTCGCGGTCATCGGGTGTGGAACACTCGGCACCGCAATTGCTGATGCGGTC
CTTTCTCCTAACGAGAAAACCAGCGTTAGCGTCAAGCGTCTTATCGCCACGGTTGGAACCGCACCCTCCAAGTCC
CGAGTAGAAGAAGCTCTGTCCCAGCACGCCTCCAAGGTGACTGTTCTTACATGCGAAGAGAATAGTCGCGCTGTC
GAAGAAGCCGACATTGTAATACTCGCAGTGAAGCCTTTCAAAAGAACCGATGTATTTTCTACGCCGGGCTTCAAA
GAAGCTATTGCCGGCAAACTTGTATTGAGCATCATGGCTGGGATCACACTTGCAGAGCTATCTCGTTTGACGTAT
GGTGAAGCAGCATCACAAAGGACACACTCATTTCAAGTTGTTCGGGCGATGCCGAACATGGCAGCCAGGATCCGG
CAAGCTGTGACGTTGTACACTTCTTGCACCACCGTCACACCAGACAATCTTGAGATTGCTGCGTGGACATTCGAC
CAAATCGGGGAGGTACATCGGATTCCTGAATCATCTTTCGACATCTGTGCGGTGCTGGTCGGCTGTGCCGGGTCT
CTCTTGTTGCTCGCCATCGATGGACTGCTGGACGCAGCAGTTGCCGAGGGTGTCCGGAGACCAGAGGTGCAGAAC
CTCGTGGTTAACAGTGCCATTGGAATGATGAAGTTGGTTCCTGCCGGGGACCATCCGGGAGTCCTTAGGGAGAAA
ATTGCGTCCCCTGGTGGATGCTCCATCCGGGCTCTGTTGGAGTTGGAGAAGCTGGGTGTCCGATCGGCGTTCACT
AGTGCTATCTTGGCGGCTGCGGAGAAGTCCAAGCGTATGTCGTCTTCTCGATGA
Transcript >Ani_SJS100_1|g11086.t1
ATGGCAGTCAACGCAAATCTAACATTCGCGGTCATCGGGTGTGGAACACTCGGCACCGCAATTGCTGATGCGGTC
CTTTCTCCTAACGAGAAAACCAGCGTTAGCGTCAAGCGTCTTATCGCCACGGTTGGAACCGCACCCTCCAAGTCC
CGAGTAGAAGAAGCTCTGTCCCAGCACGCCTCCAAGGTGACTGTTCTTACATGCGAAGAGAATAGTCGCGCTGTC
GAAGAAGCCGACATTGTAATACTCGCAGTGAAGCCTTTCAAAAGAACCGATGTATTTTCTACGCCGGGCTTCAAA
GAAGCTATTGCCGGCAAACTTGTATTGAGCATCATGGCTGGGATCACACTTGCAGAGCTATCTCGTTTGACGTAT
GGTGAAGCAGCATCACAAAGGACACACTCATTTCAAGTTGTTCGGGCGATGCCGAACATGGCAGCCAGGATCCGG
CAAGCTGTGACGTTGTACACTTCTTGCACCACCGTCACACCAGACAATCTTGAGATTGCTGCGTGGACATTCGAC
CAAATCGGGGAGGTACATCGGATTCCTGAATCATCTTTCGACATCTGTGCGGTGCTGGTCGGCTGTGCCGGGTCT
CTCTTGTTGCTCGCCATCGATGGACTGCTGGACGCAGCAGTTGCCGAGGGTGTCCGGAGACCAGAGGTGCAGAAC
CTCGTGGTTAACAGTGCCATTGGAATGATGAAGTTGGTTCCTGCCGGGGACCATCCGGGAGTCCTTAGGGAGAAA
ATTGCGTCCCCTGGTGGATGCTCCATCCGGGCTCTGTTGGAGTTGGAGAAGCTGGGTGTCCGATCGGCGTTCACT
AGTGCTATCTTGGCGGCTGCGGAGAAGTCCAAGCGTATGTCGTCTTCTCGATGA
Gene >Ani_SJS100_1|g11086.t1
ATGGCAGTCAACGCAAATCTAACATTCGCGGTCATCGGGTGTGGTAAGCTAGGAACCATTCATTCTTTCTACGCA
AGTGCTGATAAGACCTCAATGTTTCAGGAACACTCGGCACCGCAATTGCTGATGCGGTCCTTTCTCCTAACGAGA
AAACCAGCGTTAGCGTCAAGCGTCTTATCGCCACGGTTGGAACCGCACCCTCCAAGTCCCGAGTAGAAGAAGCTC
TGTCCCAGCACGCCTCCAAGGTGACTGTTCTTACATGCGAAGAGAATAGTCGCGCTGTCGAAGAAGCCGACATTG
TAATACTCGCAGTGAAGCCTTTCAAAAGAACCGATGTATTTTCTACGCCGGGCTTCAAAGAAGCTATTGCCGGCA
AACTTGTATTGAGCATCATGGCTGGGATCACACTTGCAGAGCTATCTCGTTTGACGTATGGTGAAGCAGCATCAC
AAAGGACACACTCATTTCAAGTTGTTCGGGCGATGCCGAACATGGCAGCCAGGATCCGGCAAGCTGTGACGTTGT
ACACTTCTTGCACCACCGTCACACCAGACAATCTTGAGATTGCTGCGTGGACATTCGACCAAATCGGGGAGGTAC
ATCGGATTCCTGAATCATCTTTCGACATCTGTGCGGTGCTGGTCGGCTGTGCCGGGTCTCTCTTGTTGCTCGCCA
TCGATGGACTGCTGGACGCAGCAGTTGCCGAGGGTGTCCGGAGACCAGAGGTGCAGAACCTCGTGGTTAACAGTG
CCATTGGAATGATGAAGTTGGTTCCTGCCGGGGACCATCCGGGAGTCCTTAGGGAGAAAATTGCGTCCCCTGGTG
GATGCTCCATCCGGGCTCTGTTGGAGTTGGAGAAGCTGGGTGTCCGATCGGCGTTCACTAGTGCTATCTTGGCGG
CTGCGGAGAAGTCCAAGCGTATGTCGTCTTCTCGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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