Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g11033.t1
Gene name
Locationscaffold_149:17735..18503
Strand+
Gene length (bp)768
Transcript length (bp)768
Coding sequence length (bp)768
Protein length (aa) 256

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00122 E1-E2_ATPase E1-E2 ATPase 1.3E-16 1 104
PF00702 Hydrolase haloacid dehalogenase-like hydrolase 1.7E-09 122 239

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 56 0.5

Transmembrane Domains

Domain # Start End Length
1 30 52 22
2 73 95 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g11033.t1
MLDQIVDVVREGQTRRGPVEHIADLLTSYIVPFVTLIALSIWVVWLGLGLSGALPRDYLDINRGGWPLWSLQFAI
AVFVIACPCGIALAAPTAIFVGGGLAARNGVLVKGGGEAFQEASGLDCVVFDKTGTLTQGGEPVITDYEVMPGAD
ECLVRTMIKNLEETSRHPIAKAVVSFCGLKETTSVQVEIMDETAGKGMKGTFSATKQTGAIIIGNEALMADYNVY
IPNSAAENLRSWKAQCENRMGDIWDGRNCP*
Coding >Ani_SJS100_1|g11033.t1
ATGCTGGATCAAATTGTAGATGTGGTTAGGGAAGGCCAAACTCGACGCGGTCCAGTTGAACATATTGCGGACCTT
CTGACTAGCTATATTGTGCCATTCGTCACGCTCATCGCTCTGTCTATATGGGTCGTGTGGCTGGGTCTTGGCCTT
TCTGGCGCACTTCCACGTGATTACCTAGATATCAATCGCGGAGGATGGCCACTTTGGTCCCTGCAATTTGCTATC
GCCGTCTTCGTTATAGCTTGCCCTTGCGGTATCGCTCTCGCCGCTCCAACCGCCATTTTTGTTGGTGGTGGCCTG
GCTGCTCGAAACGGGGTACTTGTGAAAGGTGGAGGAGAAGCATTCCAGGAAGCCAGCGGACTGGACTGCGTCGTC
TTTGACAAAACTGGTACCTTGACACAGGGTGGTGAGCCCGTGATCACAGACTATGAGGTCATGCCTGGTGCCGAT
GAATGCTTGGTTCGAACAATGATCAAAAACCTAGAGGAAACCAGCCGCCATCCAATCGCGAAGGCTGTTGTCTCA
TTTTGCGGTTTGAAAGAGACAACGTCGGTCCAAGTGGAAATCATGGATGAAACCGCTGGCAAGGGCATGAAAGGC
ACATTCTCAGCTACGAAGCAGACTGGAGCTATAATCATCGGAAACGAGGCTCTCATGGCTGATTACAATGTCTAC
ATCCCAAACAGTGCTGCGGAAAATCTTCGCTCATGGAAAGCTCAATGTGAGAACAGAATGGGTGATATATGGGAT
GGGAGGAATTGCCCATGA
Transcript >Ani_SJS100_1|g11033.t1
ATGCTGGATCAAATTGTAGATGTGGTTAGGGAAGGCCAAACTCGACGCGGTCCAGTTGAACATATTGCGGACCTT
CTGACTAGCTATATTGTGCCATTCGTCACGCTCATCGCTCTGTCTATATGGGTCGTGTGGCTGGGTCTTGGCCTT
TCTGGCGCACTTCCACGTGATTACCTAGATATCAATCGCGGAGGATGGCCACTTTGGTCCCTGCAATTTGCTATC
GCCGTCTTCGTTATAGCTTGCCCTTGCGGTATCGCTCTCGCCGCTCCAACCGCCATTTTTGTTGGTGGTGGCCTG
GCTGCTCGAAACGGGGTACTTGTGAAAGGTGGAGGAGAAGCATTCCAGGAAGCCAGCGGACTGGACTGCGTCGTC
TTTGACAAAACTGGTACCTTGACACAGGGTGGTGAGCCCGTGATCACAGACTATGAGGTCATGCCTGGTGCCGAT
GAATGCTTGGTTCGAACAATGATCAAAAACCTAGAGGAAACCAGCCGCCATCCAATCGCGAAGGCTGTTGTCTCA
TTTTGCGGTTTGAAAGAGACAACGTCGGTCCAAGTGGAAATCATGGATGAAACCGCTGGCAAGGGCATGAAAGGC
ACATTCTCAGCTACGAAGCAGACTGGAGCTATAATCATCGGAAACGAGGCTCTCATGGCTGATTACAATGTCTAC
ATCCCAAACAGTGCTGCGGAAAATCTTCGCTCATGGAAAGCTCAATGTGAGAACAGAATGGGTGATATATGGGAT
GGGAGGAATTGCCCATGA
Gene >Ani_SJS100_1|g11033.t1
ATGCTGGATCAAATTGTAGATGTGGTTAGGGAAGGCCAAACTCGACGCGGTCCAGTTGAACATATTGCGGACCTT
CTGACTAGCTATATTGTGCCATTCGTCACGCTCATCGCTCTGTCTATATGGGTCGTGTGGCTGGGTCTTGGCCTT
TCTGGCGCACTTCCACGTGATTACCTAGATATCAATCGCGGAGGATGGCCACTTTGGTCCCTGCAATTTGCTATC
GCCGTCTTCGTTATAGCTTGCCCTTGCGGTATCGCTCTCGCCGCTCCAACCGCCATTTTTGTTGGTGGTGGCCTG
GCTGCTCGAAACGGGGTACTTGTGAAAGGTGGAGGAGAAGCATTCCAGGAAGCCAGCGGACTGGACTGCGTCGTC
TTTGACAAAACTGGTACCTTGACACAGGGTGGTGAGCCCGTGATCACAGACTATGAGGTCATGCCTGGTGCCGAT
GAATGCTTGGTTCGAACAATGATCAAAAACCTAGAGGAAACCAGCCGCCATCCAATCGCGAAGGCTGTTGTCTCA
TTTTGCGGTTTGAAAGAGACAACGTCGGTCCAAGTGGAAATCATGGATGAAACCGCTGGCAAGGGCATGAAAGGC
ACATTCTCAGCTACGAAGCAGACTGGAGCTATAATCATCGGAAACGAGGCTCTCATGGCTGATTACAATGTCTAC
ATCCCAAACAGTGCTGCGGAAAATCTTCGCTCATGGAAAGCTCAATGTGAGAACAGAATGGGTGATATATGGGAT
GGGAGGAATTGCCCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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