Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g11033.t1
Gene name
Locationscaffold_149:17735..18503
Strand+
Gene length (bp)768
Transcript length (bp)768
Coding sequence length (bp)768
Protein length (aa) 256

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00122 E1-E2_ATPase E1-E2 ATPase 1.3E-16 1 104
PF00702 Hydrolase haloacid dehalogenase-like hydrolase 1.7E-09 122 239

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 30 52 22
2 73 95 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID3
Orthogroup11824
Change Orthofinder run
Species Protein ID
Aspergillus niger CBS 147347 Ani_SJS76_1|g10991.t1
Aspergillus niger CBS 147353 Ani_SJS100_1|g11033.t1 (this protein)
Aspergillus niger CBS 630.78 Ani_SJS18_1|g10858.t1

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g11033.t1
MLDQIVDVVREGQTRRGPVEHIADLLTSYIVPFVTLIALSIWVVWLGLGLSGALPRDYLDINRGGWPLWSLQFAI
AVFVIACPCGIALAAPTAIFVGGGLAARNGVLVKGGGEAFQEASGLDCVVFDKTGTLTQGGEPVITDYEVMPGAD
ECLVRTMIKNLEETSRHPIAKAVVSFCGLKETTSVQVEIMDETAGKGMKGTFSATKQTGAIIIGNEALMADYNVY
IPNSAAENLRSWKAQCENRMGDIWDGRNCP*
Coding >Ani_SJS100_1|g11033.t1
ATGCTGGATCAAATTGTAGATGTGGTTAGGGAAGGCCAAACTCGACGCGGTCCAGTTGAACATATTGCGGACCTT
CTGACTAGCTATATTGTGCCATTCGTCACGCTCATCGCTCTGTCTATATGGGTCGTGTGGCTGGGTCTTGGCCTT
TCTGGCGCACTTCCACGTGATTACCTAGATATCAATCGCGGAGGATGGCCACTTTGGTCCCTGCAATTTGCTATC
GCCGTCTTCGTTATAGCTTGCCCTTGCGGTATCGCTCTCGCCGCTCCAACCGCCATTTTTGTTGGTGGTGGCCTG
GCTGCTCGAAACGGGGTACTTGTGAAAGGTGGAGGAGAAGCATTCCAGGAAGCCAGCGGACTGGACTGCGTCGTC
TTTGACAAAACTGGTACCTTGACACAGGGTGGTGAGCCCGTGATCACAGACTATGAGGTCATGCCTGGTGCCGAT
GAATGCTTGGTTCGAACAATGATCAAAAACCTAGAGGAAACCAGCCGCCATCCAATCGCGAAGGCTGTTGTCTCA
TTTTGCGGTTTGAAAGAGACAACGTCGGTCCAAGTGGAAATCATGGATGAAACCGCTGGCAAGGGCATGAAAGGC
ACATTCTCAGCTACGAAGCAGACTGGAGCTATAATCATCGGAAACGAGGCTCTCATGGCTGATTACAATGTCTAC
ATCCCAAACAGTGCTGCGGAAAATCTTCGCTCATGGAAAGCTCAATGTGAGAACAGAATGGGTGATATATGGGAT
GGGAGGAATTGCCCATGA
Transcript >Ani_SJS100_1|g11033.t1
ATGCTGGATCAAATTGTAGATGTGGTTAGGGAAGGCCAAACTCGACGCGGTCCAGTTGAACATATTGCGGACCTT
CTGACTAGCTATATTGTGCCATTCGTCACGCTCATCGCTCTGTCTATATGGGTCGTGTGGCTGGGTCTTGGCCTT
TCTGGCGCACTTCCACGTGATTACCTAGATATCAATCGCGGAGGATGGCCACTTTGGTCCCTGCAATTTGCTATC
GCCGTCTTCGTTATAGCTTGCCCTTGCGGTATCGCTCTCGCCGCTCCAACCGCCATTTTTGTTGGTGGTGGCCTG
GCTGCTCGAAACGGGGTACTTGTGAAAGGTGGAGGAGAAGCATTCCAGGAAGCCAGCGGACTGGACTGCGTCGTC
TTTGACAAAACTGGTACCTTGACACAGGGTGGTGAGCCCGTGATCACAGACTATGAGGTCATGCCTGGTGCCGAT
GAATGCTTGGTTCGAACAATGATCAAAAACCTAGAGGAAACCAGCCGCCATCCAATCGCGAAGGCTGTTGTCTCA
TTTTGCGGTTTGAAAGAGACAACGTCGGTCCAAGTGGAAATCATGGATGAAACCGCTGGCAAGGGCATGAAAGGC
ACATTCTCAGCTACGAAGCAGACTGGAGCTATAATCATCGGAAACGAGGCTCTCATGGCTGATTACAATGTCTAC
ATCCCAAACAGTGCTGCGGAAAATCTTCGCTCATGGAAAGCTCAATGTGAGAACAGAATGGGTGATATATGGGAT
GGGAGGAATTGCCCATGA
Gene >Ani_SJS100_1|g11033.t1
ATGCTGGATCAAATTGTAGATGTGGTTAGGGAAGGCCAAACTCGACGCGGTCCAGTTGAACATATTGCGGACCTT
CTGACTAGCTATATTGTGCCATTCGTCACGCTCATCGCTCTGTCTATATGGGTCGTGTGGCTGGGTCTTGGCCTT
TCTGGCGCACTTCCACGTGATTACCTAGATATCAATCGCGGAGGATGGCCACTTTGGTCCCTGCAATTTGCTATC
GCCGTCTTCGTTATAGCTTGCCCTTGCGGTATCGCTCTCGCCGCTCCAACCGCCATTTTTGTTGGTGGTGGCCTG
GCTGCTCGAAACGGGGTACTTGTGAAAGGTGGAGGAGAAGCATTCCAGGAAGCCAGCGGACTGGACTGCGTCGTC
TTTGACAAAACTGGTACCTTGACACAGGGTGGTGAGCCCGTGATCACAGACTATGAGGTCATGCCTGGTGCCGAT
GAATGCTTGGTTCGAACAATGATCAAAAACCTAGAGGAAACCAGCCGCCATCCAATCGCGAAGGCTGTTGTCTCA
TTTTGCGGTTTGAAAGAGACAACGTCGGTCCAAGTGGAAATCATGGATGAAACCGCTGGCAAGGGCATGAAAGGC
ACATTCTCAGCTACGAAGCAGACTGGAGCTATAATCATCGGAAACGAGGCTCTCATGGCTGATTACAATGTCTAC
ATCCCAAACAGTGCTGCGGAAAATCTTCGCTCATGGAAAGCTCAATGTGAGAACAGAATGGGTGATATATGGGAT
GGGAGGAATTGCCCATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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