Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g11024.t1
Gene name
Locationscaffold_148:23829..24499
Strand+
Gene length (bp)670
Transcript length (bp)237
Coding sequence length (bp)237
Protein length (aa) 79

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01423 LSM LSM domain 1.3E-21 7 70

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g11024.t1
MPQAQPELKKYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGEKVAIGMIVIRGNSVVMLEALERI
SDK*
Coding >Ani_SJS100_1|g11024.t1
ATGCCTCAAGCCCAGCCCGAGTTGAAGAAGTACATGGAAAAGCGGGTATTCTGCCAACTGAACGGCAACCGCAAA
GTCATTGGTATCCTGCGAGGCTATGATGTGTTCATGAACATTGTCCTTGACGAGGCTTTCGAGGAGAAGCAGGGT
GGTGAGAAGGTTGCTATCGGCATGATTGTCATTCGCGGTAACTCGGTTGTTATGCTCGAGGCCCTGGAACGTATC
AGCGACAAATAA
Transcript >Ani_SJS100_1|g11024.t1
ATGCCTCAAGCCCAGCCCGAGTTGAAGAAGTACATGGAAAAGCGGGTATTCTGCCAACTGAACGGCAACCGCAAA
GTCATTGGTATCCTGCGAGGCTATGATGTGTTCATGAACATTGTCCTTGACGAGGCTTTCGAGGAGAAGCAGGGT
GGTGAGAAGGTTGCTATCGGCATGATTGTCATTCGCGGTAACTCGGTTGTTATGCTCGAGGCCCTGGAACGTATC
AGCGACAAATAA
Gene >Ani_SJS100_1|g11024.t1
ATGCCTCAAGCCCAGCCCGAGTTGAAGAAGGTATGATATTCGCGATTAATACCCCGCCAAACTTTCCCCGATACA
GAGCACCGAAGCTAACATTGCGGTTTTCCAACAGTACATGGAAAAGCGGGTATTCTGCCAACTGAACGGCAACCG
CAAAGTCATTGGTATCCTGCGAGGCTATGATGTACGTCGCGCTTGTGCCCCCTGGATTTCTACTTTCCTGCCTGC
TGTGTTGCTGTTATACGGGTTGATATGCCTTGGATGGGGTCGAAGATTGAGATGTTCTTGGGTTCAATCCATCGA
GTGAAAGAGGGGGCGGGGAGAGTGTGTGTATGTGTGTATAGGTTACTGACGTCTGCGCTTGTCTATACAGGTGTT
CATGAACATTGTCCTTGACGAGGCTTTCGAGGAGAAGCAGGGTGGTGAGAAGGTTGCTATCGGCATGATTGTATG
TGGCTAGTCCCATTCCCGGACGTCTACGTTTGGTCTGCAAACTGGGAGGGGCAGGAAGCTAATGGCTATCTATTC
GTCTTAATAGGTCATTCGCGGTAACTCGGTTGTTATGCTCGAGGTCAGTATCACCTGCCATAGGACTACGATTGA
TGGCGTGCCTTATCAAGAGACTAACCTTTTGTACTTAAAATAGGCCCTGGAACGTATCAGCGACAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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