© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g11.t1 |
| Gene name | |
| Location | scaffold_001:29675..33220 |
| Strand | - |
| Gene length (bp) | 3545 |
| Transcript length (bp) | 2493 |
| Coding sequence length (bp) | 2493 |
| Protein length (aa) | 831 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01545 | Cation_efflux | Cation efflux family | 6.5E-46 | 469 | 671 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0008324 | cation transmembrane transporter activity | Yes |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0006811 | ion transport | No |
| GO:0005215 | transporter activity | No |
| GO:0009987 | cellular process | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0051234 | establishment of localization | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 13 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 200 | 222 | 22 |
| 2 | 237 | 255 | 18 |
| 3 | 262 | 279 | 17 |
| 4 | 317 | 339 | 22 |
| 5 | 468 | 490 | 22 |
| 6 | 535 | 557 | 22 |
| 7 | 569 | 591 | 22 |
| 8 | 613 | 635 | 22 |
| 9 | 642 | 664 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g11.t1 MLDRLVRDAAQRMAIEGPVVPAKWGNSTSSEEGDKKHGDSSGGEDCQLYSGLNGGILGRSPTPLDAASKQIKRAA RPRIASRPSTTQEVLSGLLLSLPWIILSWYHQQHALWQTTFSTSDETAASSLGSELLEQAASKTSMLTAVTMIVY GCGQLFRSIQRGGSDSEVTLPRMSSSAASAALLRVSSVALPIYATLKVGGFLVACGLLLPVASGLPTVVQGYGLH SSAQSRLSQKKVTAMLLVTIIALSLWGMNATRDPHPYLGYVSLLTSVFVLRLPFSGTPSVSADLDYLTSNGAVSQ KQSTKQDSGKLSSSDSILAVLSGIILALVTVVVSGNVSLKASNMMYQLAAAGALATSLIFVSPSHLRSPQKIGLM IGVGAAALLSSPPLQEKVHLAYVARAIATAASFLAARFDDRQMRLSQHSHTHNHHHHAHSGADATKITRLIIQYS EPYPLLYSILKESDSRRIFYFMSLNFAFMLVQLSYGFMTGSLGLLSDSIHMFFDCLALVVGLCAAVMSKWPPSSR FPYGYGKVDTLSGFANGIFLMIISIEIIYEAVERLSSGSQMHRLGELLAVSVAGLLVNLVGIMAFDHGHAHGHDH SHGHSHGNENMHGIFLHILADTLGSVAVVISTILVHYSGWPGFDPIASCLIAILIFASAIPLVSSTAKTLLLTLP ADIEYNVRETLAGVSTLRGVVGYTVPKFWLDDTGKESGHHHHHHDDHAHDHGCNHSHSHSHDHDHDHAHDHGHTH SHDHHFHSHDDHDHDHDHHDTHTPNVLGVIHVIASRSSDLEDVRQRTVDYLREKGMDILVQVEREGDGRCWCGGG GNKHS* |
| Coding | >Ani_SJS100_1|g11.t1 ATGCTGGACAGATTGGTTCGTGATGCAGCTCAGCGCATGGCCATTGAAGGGCCCGTAGTACCAGCGAAATGGGGA AATTCCACCAGCTCAGAGGAAGGAGATAAGAAGCACGGAGATAGCTCCGGAGGGGAGGATTGCCAGCTGTACTCC GGTTTGAACGGAGGAATCCTGGGCCGATCCCCAACCCCACTCGATGCCGCGTCAAAGCAAATCAAGCGCGCGGCT CGACCTCGGATTGCCAGTCGCCCAAGCACGACTCAGGAAGTCCTCTCTGGCCTACTCCTCTCCCTGCCGTGGATC ATTCTTTCCTGGTACCACCAACAACATGCGCTTTGGCAGACGACGTTTTCGACAAGCGATGAGACCGCTGCATCT AGCTTAGGAAGCGAACTCTTAGAGCAGGCTGCCAGCAAAACCTCCATGCTGACCGCCGTCACAATGATTGTATAT GGGTGTGGGCAATTATTTCGATCGATTCAACGAGGAGGGAGTGACTCGGAGGTTACACTGCCTCGAATGAGCTCC AGTGCGGCAAGCGCTGCTTTGCTCCGGGTGTCTTCTGTCGCATTGCCGATATATGCGACATTGAAGGTGGGAGGG TTCCTTGTCGCATGCGGCTTGTTACTTCCTGTAGCGTCAGGTTTGCCGACCGTCGTTCAAGGCTATGGCCTTCAT AGCAGTGCACAGTCCCGGCTCAGCCAAAAGAAAGTAACGGCCATGCTTCTCGTCACCATCATTGCTCTGAGCCTT TGGGGTATGAATGCGACGCGAGACCCCCACCCATACCTGGGCTATGTCTCTCTGCTCACGTCGGTCTTCGTTCTT CGGCTCCCCTTTTCTGGGACTCCGTCCGTTTCTGCTGATCTTGATTACTTGACGTCCAATGGCGCAGTATCCCAG AAACAATCTACAAAGCAGGACTCGGGCAAACTTTCGTCTAGTGATTCAATCCTGGCTGTCCTTTCAGGCATTATC CTGGCACTTGTTACTGTTGTTGTTTCTGGCAATGTGTCCCTGAAGGCTTCCAACATGATGTACCAACTCGCAGCT GCTGGAGCACTTGCAACAAGTCTCATATTCGTTTCCCCTTCCCATCTACGCTCACCACAAAAGATTGGTCTTATG ATCGGTGTCGGAGCTGCCGCGCTCTTAAGCTCCCCGCCGCTGCAAGAGAAAGTCCACCTAGCTTATGTAGCTCGC GCCATTGCAACTGCCGCCTCGTTCCTTGCTGCCAGATTCGATGACAGACAGATGCGCCTTTCACAACACTCTCAT ACCCATAATCACCATCATCATGCTCATTCTGGAGCTGATGCTACGAAGATAACGAGGCTCATCATCCAGTACAGC GAGCCTTATCCCCTTTTGTACAGTATTCTCAAGGAAAGCGATTCACGACGTATCTTCTACTTCATGAGTCTTAAT TTTGCCTTTATGCTTGTTCAGCTGTCCTATGGATTTATGACTGGATCCCTGGGTCTTCTTAGTGACAGTATTCAT ATGTTCTTCGACTGCTTAGCGCTCGTGGTTGGTCTTTGTGCTGCTGTCATGAGTAAATGGCCCCCGAGCTCTAGG TTCCCCTACGGATATGGCAAAGTCGACACGCTTTCTGGGTTTGCCAACGGCATCTTCCTTATGATCATCAGCATT GAAATCATCTATGAAGCTGTCGAGCGACTTTCATCCGGCAGTCAGATGCATCGTCTCGGCGAACTACTGGCGGTG AGTGTTGCGGGTCTTCTCGTCAACCTTGTCGGAATCATGGCATTCGATCATGGACACGCGCACGGCCACGATCAC AGTCACGGGCACTCTCACGGAAACGAGAATATGCACGGCATTTTCCTACACATTCTCGCCGACACTCTTGGCTCC GTGGCCGTTGTGATCTCGACCATCCTCGTGCACTACTCTGGCTGGCCAGGGTTCGATCCAATTGCCTCTTGTCTC ATTGCAATCTTAATTTTTGCCTCGGCAATCCCGCTTGTCAGCAGCACTGCGAAGACCCTGCTGCTCACCCTGCCA GCTGACATTGAATACAATGTCCGCGAAACCCTTGCTGGCGTTAGTACTTTACGGGGCGTTGTCGGGTACACCGTC CCAAAGTTCTGGCTGGACGATACGGGGAAGGAATCCGGCCACCATCACCATCATCACGACGACCATGCTCATGAT CATGGATGCAACCACAGTCATAGCCATAGCCACGATCACGATCACGATCATGCTCACGACCACGGCCATACTCAC AGTCATGACCACCATTTCCACAGCCACGATGATCACGATCACGATCACGATCACCATGACACGCATACTCCCAAC GTCCTCGGCGTAATCCACGTCATCGCCTCTCGCAGCTCCGACCTCGAAGATGTCCGCCAACGCACCGTGGACTAC CTCCGCGAGAAGGGCATGGACATTCTCGTTCAGGTCGAACGCGAAGGAGACGGCCGTTGTTGGTGCGGTGGCGGC GGGAATAAGCATTCTTGA |
| Transcript | >Ani_SJS100_1|g11.t1 ATGCTGGACAGATTGGTTCGTGATGCAGCTCAGCGCATGGCCATTGAAGGGCCCGTAGTACCAGCGAAATGGGGA AATTCCACCAGCTCAGAGGAAGGAGATAAGAAGCACGGAGATAGCTCCGGAGGGGAGGATTGCCAGCTGTACTCC GGTTTGAACGGAGGAATCCTGGGCCGATCCCCAACCCCACTCGATGCCGCGTCAAAGCAAATCAAGCGCGCGGCT CGACCTCGGATTGCCAGTCGCCCAAGCACGACTCAGGAAGTCCTCTCTGGCCTACTCCTCTCCCTGCCGTGGATC ATTCTTTCCTGGTACCACCAACAACATGCGCTTTGGCAGACGACGTTTTCGACAAGCGATGAGACCGCTGCATCT AGCTTAGGAAGCGAACTCTTAGAGCAGGCTGCCAGCAAAACCTCCATGCTGACCGCCGTCACAATGATTGTATAT GGGTGTGGGCAATTATTTCGATCGATTCAACGAGGAGGGAGTGACTCGGAGGTTACACTGCCTCGAATGAGCTCC AGTGCGGCAAGCGCTGCTTTGCTCCGGGTGTCTTCTGTCGCATTGCCGATATATGCGACATTGAAGGTGGGAGGG TTCCTTGTCGCATGCGGCTTGTTACTTCCTGTAGCGTCAGGTTTGCCGACCGTCGTTCAAGGCTATGGCCTTCAT AGCAGTGCACAGTCCCGGCTCAGCCAAAAGAAAGTAACGGCCATGCTTCTCGTCACCATCATTGCTCTGAGCCTT TGGGGTATGAATGCGACGCGAGACCCCCACCCATACCTGGGCTATGTCTCTCTGCTCACGTCGGTCTTCGTTCTT CGGCTCCCCTTTTCTGGGACTCCGTCCGTTTCTGCTGATCTTGATTACTTGACGTCCAATGGCGCAGTATCCCAG AAACAATCTACAAAGCAGGACTCGGGCAAACTTTCGTCTAGTGATTCAATCCTGGCTGTCCTTTCAGGCATTATC CTGGCACTTGTTACTGTTGTTGTTTCTGGCAATGTGTCCCTGAAGGCTTCCAACATGATGTACCAACTCGCAGCT GCTGGAGCACTTGCAACAAGTCTCATATTCGTTTCCCCTTCCCATCTACGCTCACCACAAAAGATTGGTCTTATG ATCGGTGTCGGAGCTGCCGCGCTCTTAAGCTCCCCGCCGCTGCAAGAGAAAGTCCACCTAGCTTATGTAGCTCGC GCCATTGCAACTGCCGCCTCGTTCCTTGCTGCCAGATTCGATGACAGACAGATGCGCCTTTCACAACACTCTCAT ACCCATAATCACCATCATCATGCTCATTCTGGAGCTGATGCTACGAAGATAACGAGGCTCATCATCCAGTACAGC GAGCCTTATCCCCTTTTGTACAGTATTCTCAAGGAAAGCGATTCACGACGTATCTTCTACTTCATGAGTCTTAAT TTTGCCTTTATGCTTGTTCAGCTGTCCTATGGATTTATGACTGGATCCCTGGGTCTTCTTAGTGACAGTATTCAT ATGTTCTTCGACTGCTTAGCGCTCGTGGTTGGTCTTTGTGCTGCTGTCATGAGTAAATGGCCCCCGAGCTCTAGG TTCCCCTACGGATATGGCAAAGTCGACACGCTTTCTGGGTTTGCCAACGGCATCTTCCTTATGATCATCAGCATT GAAATCATCTATGAAGCTGTCGAGCGACTTTCATCCGGCAGTCAGATGCATCGTCTCGGCGAACTACTGGCGGTG AGTGTTGCGGGTCTTCTCGTCAACCTTGTCGGAATCATGGCATTCGATCATGGACACGCGCACGGCCACGATCAC AGTCACGGGCACTCTCACGGAAACGAGAATATGCACGGCATTTTCCTACACATTCTCGCCGACACTCTTGGCTCC GTGGCCGTTGTGATCTCGACCATCCTCGTGCACTACTCTGGCTGGCCAGGGTTCGATCCAATTGCCTCTTGTCTC ATTGCAATCTTAATTTTTGCCTCGGCAATCCCGCTTGTCAGCAGCACTGCGAAGACCCTGCTGCTCACCCTGCCA GCTGACATTGAATACAATGTCCGCGAAACCCTTGCTGGCGTTAGTACTTTACGGGGCGTTGTCGGGTACACCGTC CCAAAGTTCTGGCTGGACGATACGGGGAAGGAATCCGGCCACCATCACCATCATCACGACGACCATGCTCATGAT CATGGATGCAACCACAGTCATAGCCATAGCCACGATCACGATCACGATCATGCTCACGACCACGGCCATACTCAC AGTCATGACCACCATTTCCACAGCCACGATGATCACGATCACGATCACGATCACCATGACACGCATACTCCCAAC GTCCTCGGCGTAATCCACGTCATCGCCTCTCGCAGCTCCGACCTCGAAGATGTCCGCCAACGCACCGTGGACTAC CTCCGCGAGAAGGGCATGGACATTCTCGTTCAGGTCGAACGCGAAGGAGACGGCCGTTGTTGGTGCGGTGGCGGC GGGAATAAGCATTCTTGA |
| Gene | >Ani_SJS100_1|g11.t1 ATGCTGGACAGATTGGTTCGTGATGCAGCTCAGCGCATGGCCATTGAAGGGCCCGTAGTACCAGCGAAATGGGGA AATTCCACCAGCTCAGAGGAAGGAGATAAGAAGCACGGAGATAGCTCCGGAGGGGAGGATTGCCAGCTGTACTCC GGTTTGAACGGAGGAATCCTGGGCCGATCCCCAACCCCACTCGATGCCGCGTCAAAGCAAATCAAGCGCGCGGCT CGACCTCGGATTGGTAGGATGCATGCAATGTGCCTGATCGTGATTTCTGCAGGCAAAAAGCAACGCGAGATTCTG GCCTGGACGTGTCTGGAACAAGTTCCCTGACCTCAGCCAGTCGCCCAAGGTAGTTTGTTTGGTTGGAGATTAATC CATTCGGATCGAGGCCGGGCGATCAGCCCGCGGCCAGCCCAATCACGTGGCCCGGGGGTTATCGCGGGCAGCCGA TCATTCAGTTGGCGGCGCGCATCTGGGGGCCATCCCATCCCCATTACTTGCCACAAGCGCCCGTCAAGCTGCCAA CTCTTTGCCCAGTTGCTCCCAATTCCCCCTCTCCCCGGCGCTATGCCACCTCGTTTGCACCAGACTCCCGGCCGT TCATCTGCTTTGAGCTGCTAGAGCTCCAATCTTTGTCAAACTACCTCCTTGCTCCCTCCCTCCGAACGCTCGCCT TGTGCTCCCTCCGTGGTCAGTCGCCTCTCTTCACGAACCACTAGAGATCATGTCGACGGGGGCTCCTGTGTCCAC CGTGGATACGATTCCTCAGGTACATGGTCTAGGACATTCTCGTGGCCGCGGTCAATCGCGTGCATCTCGCCGGTC AAACGGTCCCATCTCCATCTCGGCTTCCTCCTTCGATGCCTCCTCGGCGCAACAACAGCCCCCACAGCCTCTACC GACTACACAACACACCAATGGCCAAACTGTGAGCCCATCGTGGCCGGAGCACCATCACACACATTCCCACTCCCA CTCCCACTCTCATTCTCATTCTCATTCTCATTCCCATTCTCACTCACACTCAACTCATAATGTGTGGGAACATGC CCATCACACGAGCCTCGGCTCCATCAATCACACTAAGAGCGATAGTGTGACGGGATTAATTGGAGCTCAATCGAT TAGCTCTTCAATTGACTCTCAACCAAGCACGACGTAAGTGTTCTTTGACCTATTCACTGGGAACCGATCCTGACT CTACTCAGTCAGGAAGTCCTCTCTGGCCTACTCCTCTCCCTGCCGTGGATCATTCTTTCCTGGTACCACCAACAA CATGCGCTTTGGCAGACGACGTTTTCGACAAGCGATGAGACCGCTGCATCTAGCTTAGGAAGCGAACTCTTAGAG CAGGCTGCCAGCAAAACCTCCATGCTGACCGCCGTCACAATGATTGTATATGGGTGTGGGCAATTATTTCGATCG ATTCAACGAGGAGGGAGTGACTCGGAGGTTACACTGCCTCGAATGAGCTCCAGTGCGGCAAGCGCTGCTTTGCTC CGGGTGTCTTCTGTCGCATTGCCGATATATGCGACATTGAAGGTGGGAGGGTTCCTTGTCGCATGCGGCTTGTTA CTTCCTGTAGCGTCAGGTTTGCCGACCGTCGTTCAAGGCTATGGCCTTCATAGCAGTGCACAGTCCCGGCTCAGC CAAAAGAAAGTAACGGCCATGCTTCTCGTCACCATCATTGCTCTGAGCCTTTGGGGTATGAATGCGACGCGAGAC CCCCACCCATACCTGGGCTATGTCTCTCTGCTCACGTCGGTCTTCGTTCTTCGGCTCCCCTTTTCTGGGACTCCG TCCGTTTCTGCTGATCTTGATTACTTGACGTCCAATGGCGCAGTATCCCAGAAACAATCTACAAAGCAGGACTCG GGCAAACTTTCGTCTAGTGATTCAATCCTGGCTGTCCTTTCAGGCATTATCCTGGCACTTGTTACTGTTGTTGTT TCTGGCAATGTGTCCCTGAAGGCTTCCAACATGATGTACCAACTCGCAGCTGCTGGAGCACTTGCAACAAGTCTC ATATTCGTTTCCCCTTCCCATCTACGCTCACCACAAAAGATTGGTCTTATGATCGGTGTCGGAGCTGCCGCGCTC TTAAGCTCCCCGCCGCTGCAAGAGAAAGTCCACCTAGCTTATGTAGCTCGCGCCATTGCAACTGCCGCCTCGTTC CTTGCTGCCAGATTCGATGACAGACAGATGCGCCTTTCACAACACTCTCATACCCATAATCACCATCATCATGCT CATTCTGGAGCTGATGCTACGAAGATAACGAGGCTCATCATCCAGTACAGCGAGCCTTATCCCCTTTTGTACAGT ATTCTCAAGGAAAGCGATTCACGACGTATCTTCTACTTCATGAGGTATTTCATTCGTCGCCTTGTATTTGAGGTA GCATGACACTAACTTAACTAGTCTTAATTTTGCCTTTATGCTTGTTCAGCTGTCCTATGGATTTATGACTGGATC CCTGGGTCTTCTTAGTGACAGTATTCATATGTTCTTCGACTGCTTAGCGCTCGTGGTTGGTCTTTGTGCTGCTGT CATGAGTAAATGGCCCCCGAGCTCTAGGTTCCCCTACGGATATGGCAAAGTCGACACGCTTTCTGGGTTTGCCAA CGGCATCTTCCTTATGTAAGTGCTGCTAGTAAGCACCTTGGGTGACCGTTCTAACAATCCATAGGATCATCAGCA TTGAAATCATCTATGAAGCTGTCGAGCGACTTTCATCCGGCAGTCAGATGCATCGTCTCGGCGAACTACTGGCGG TGAGTGTTGCGGGTCTTCTCGTCAACCTTGTCGGAATCATGGCATTCGATCATGGACACGCGCACGGCCACGATC ACAGTCACGGGCACTCTCACGGAAACGAGAATATGCACGGCATTTTCCTACACATTCTCGCCGACACTCTTGGCT CCGTGGCCGTTGTGATCTCGACCATCCTCGTGCACTACTCTGGCTGGCCAGGGTTCGATCCAATTGCCTCTTGTC TCATTGCAATCTTAATTTTTGCCTCGGCAATCCCGCTTGTCAGCAGCACTGCGAAGACCCTGCTGCTCACCCTGC CAGCTGACATTGAATACAATGTCCGCGAAACCCTTGCTGGCGTTAGTACTTTACGGGGCGTTGTCGGGTACACCG TCCCAAAGTTCTGGCTGGACGATACGGGGAAGGAATCCGGCCACCATCACCATCATCACGACGACCATGCTCATG ATCATGGATGCAACCACAGTCATAGCCATAGCCACGATCACGATCACGATCATGCTCACGACCACGGCCATACTC ACAGTCATGACCACCATTTCCACAGCCACGATGATCACGATCACGATCACGATCACCATGACACGCATACTCCCA ACGTCCTCGGCGTAATCCACGTCATCGCCTCTCGCAGCTCCGACCTCGAAGATGTCCGCCAACGCACCGTGGACT ACCTCCGCGAGAAGGGCATGGACATTCTCGTTCAGGTCGAACGCGAAGGAGACGGCCGTTGTTGGTGCGGTGGCG GCGGGAATAAGCATTCTTGA |