© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10993.t1 |
| Gene name | |
| Location | scaffold_146:8236..10231 |
| Strand | - |
| Gene length (bp) | 1995 |
| Transcript length (bp) | 1647 |
| Coding sequence length (bp) | 1647 |
| Protein length (aa) | 549 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | 5.3E-10 | 114 | 153 |
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | 6.4E-14 | 156 | 194 |
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | 5.7E-10 | 197 | 238 |
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | 1.4E-04 | 251 | 279 |
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | 3.9E-07 | 283 | 321 |
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | 9.8E-14 | 324 | 364 |
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | 1.5E-13 | 366 | 405 |
| PF00514 | Arm | Armadillo/beta-catenin-like repeat | 7.7E-08 | 412 | 449 |
| PF01749 | IBB | Importin beta binding domain | 3.6E-27 | 10 | 103 |
| PF16186 | Arm_3 | Atypical Arm repeat | 2.1E-23 | 467 | 520 |
| PF13513 | HEAT_EZ | HEAT-like repeat | 1.9E-09 | 140 | 193 |
| PF02985 | HEAT | HEAT repeat | 1.4E-06 | 168 | 194 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006606 | protein import into nucleus | Yes |
| GO:0005515 | protein binding | Yes |
| GO:0061608 | nuclear import signal receptor activity | Yes |
| GO:0051234 | establishment of localization | No |
| GO:0008104 | protein localization | No |
| GO:0051649 | establishment of localization in cell | No |
| GO:0045184 | establishment of protein localization | No |
| GO:0072594 | establishment of protein localization to organelle | No |
| GO:0071705 | nitrogen compound transport | No |
| GO:0003674 | molecular_function | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0140104 | molecular carrier activity | No |
| GO:0051170 | import into nucleus | No |
| GO:0034504 | protein localization to nucleus | No |
| GO:0070727 | cellular macromolecule localization | No |
| GO:0051179 | localization | No |
| GO:0051169 | nuclear transport | No |
| GO:0140142 | nucleocytoplasmic carrier activity | No |
| GO:0006886 | intracellular protein transport | No |
| GO:0008150 | biological_process | No |
| GO:0071702 | organic substance transport | No |
| GO:0015031 | protein transport | No |
| GO:0046907 | intracellular transport | No |
| GO:0051641 | cellular localization | No |
| GO:0005488 | binding | No |
| GO:0033036 | macromolecule localization | No |
| GO:0006913 | nucleocytoplasmic transport | No |
| GO:0033365 | protein localization to organelle | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 50 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10993.t1 MAERYIPEHRRTQFKARNQFRPDELRRRREEQQVEIRKQKRDENLAKRRGIQTRDGGIGVGGGVAAESDDEASAI ESELNVELPEMVKGVFSDQIDQQIQATTKFRKLLSKERNPPIERVIETGVVSRFVEFLRSPHTLVQFEAAWALTN IASGSAQQTQVVIEAGAVPIFCELLSSPEPDVREQAVWALGNIAGDSPQCRDFVLNAGALRPLLNLINDGRKLSM LRNATWTLSNFCRGKTPQPDWNTIAPALPVLAKLIYMLDDEVLIDACWAISYLSDGANDKIQAVIEAGIPRRLVE LLMHASTSVQTPALRSVGNIVTGDDVQTQVIINCGALPALLALLSSTKDGIRKEACWTISNITAGNSSQIQAVVD AGIIPPLINLLANGDFKTRKEACWAISNATSGGLQKPDQIRYLVSQGCIKPLCDLLACPDNKIIQVALDGLENIL KVGEMDKEAGQSEANVNRYALFIEEAGGMEKIHDCQNNANEEIYMKAYNIIEKYFSDEDEAGDIDEVAPQQTQTG FALGTTQQQGGFNFANGGDSMDM* |
| Coding | >Ani_SJS100_1|g10993.t1 ATGGCCGAGCGCTATATCCCCGAACATCGTCGCACTCAGTTCAAGGCCCGGAACCAGTTCCGGCCTGACGAGCTT CGTCGTCGTCGTGAGGAACAACAGGTTGAGATCAGAAAGCAGAAGAGAGATGAGAATTTGGCCAAGAGGAGAGGT ATCCAGACCCGCGATGGCGGCATTGGCGTGGGCGGCGGCGTAGCTGCCGAGAGTGATGATGAGGCCAGCGCCATC GAGAGTGAGCTTAATGTGGAGCTCCCCGAGATGGTTAAGGGCGTCTTCTCCGATCAGATCGACCAGCAGATCCAA GCCACCACCAAGTTCAGGAAATTGCTCTCCAAGGAGCGCAACCCCCCCATTGAGCGTGTCATCGAGACCGGTGTC GTGAGCCGCTTCGTTGAATTCCTCCGATCCCCCCACACTCTTGTTCAGTTCGAAGCTGCTTGGGCTTTGACCAAC ATTGCCTCTGGTTCCGCCCAACAGACCCAGGTCGTTATCGAGGCTGGTGCTGTACCGATCTTCTGCGAACTCCTG AGCAGCCCTGAACCCGATGTTCGTGAGCAGGCCGTCTGGGCCCTTGGTAACATTGCGGGTGACAGCCCTCAATGC CGTGACTTCGTTCTCAACGCCGGTGCTCTGCGTCCTCTGCTGAACCTCATCAACGATGGCCGGAAGCTGAGCATG CTGCGCAACGCTACCTGGACCCTGAGCAACTTCTGCCGCGGCAAGACGCCTCAGCCTGATTGGAACACTATTGCC CCCGCTCTTCCTGTCCTTGCTAAGCTCATCTACATGCTTGATGATGAAGTCCTGATCGATGCTTGCTGGGCCATC TCCTACCTGTCTGATGGCGCCAACGACAAGATTCAGGCTGTCATCGAGGCCGGCATCCCTCGCCGTCTCGTCGAG CTCCTCATGCACGCCTCGACCTCGGTCCAGACCCCCGCTCTCCGGTCGGTCGGTAACATCGTCACTGGTGACGAC GTCCAGACCCAGGTCATCATCAACTGCGGTGCTCTTCCCGCCCTCCTCGCTCTGCTGAGCTCCACCAAGGACGGT ATCCGTAAGGAGGCGTGCTGGACCATCTCCAACATCACTGCTGGTAACTCCAGCCAGATCCAGGCTGTCGTCGAC GCCGGCATCATCCCTCCCTTGATCAACCTGCTGGCGAACGGTGACTTCAAGACGCGTAAGGAGGCCTGCTGGGCC ATCTCCAACGCCACCTCCGGTGGTCTGCAGAAGCCTGACCAGATCCGCTACCTCGTGTCCCAGGGATGCATCAAG CCCCTGTGCGACCTTCTTGCTTGCCCTGACAACAAGATCATCCAGGTTGCTCTGGATGGTCTGGAGAACATCCTC AAGGTCGGCGAGATGGACAAGGAGGCTGGCCAGTCTGAGGCCAACGTCAACCGCTACGCTCTGTTCATCGAAGAG GCCGGTGGTATGGAGAAGATCCATGACTGCCAGAACAACGCCAACGAGGAGATCTACATGAAGGCATACAACATC ATCGAGAAGTACTTCTCTGATGAGGACGAGGCTGGTGACATTGATGAGGTTGCTCCTCAGCAGACCCAGACTGGA TTCGCCCTCGGCACCACGCAACAGCAGGGCGGATTCAACTTCGCCAACGGTGGTGACTCCATGGATATGTAA |
| Transcript | >Ani_SJS100_1|g10993.t1 ATGGCCGAGCGCTATATCCCCGAACATCGTCGCACTCAGTTCAAGGCCCGGAACCAGTTCCGGCCTGACGAGCTT CGTCGTCGTCGTGAGGAACAACAGGTTGAGATCAGAAAGCAGAAGAGAGATGAGAATTTGGCCAAGAGGAGAGGT ATCCAGACCCGCGATGGCGGCATTGGCGTGGGCGGCGGCGTAGCTGCCGAGAGTGATGATGAGGCCAGCGCCATC GAGAGTGAGCTTAATGTGGAGCTCCCCGAGATGGTTAAGGGCGTCTTCTCCGATCAGATCGACCAGCAGATCCAA GCCACCACCAAGTTCAGGAAATTGCTCTCCAAGGAGCGCAACCCCCCCATTGAGCGTGTCATCGAGACCGGTGTC GTGAGCCGCTTCGTTGAATTCCTCCGATCCCCCCACACTCTTGTTCAGTTCGAAGCTGCTTGGGCTTTGACCAAC ATTGCCTCTGGTTCCGCCCAACAGACCCAGGTCGTTATCGAGGCTGGTGCTGTACCGATCTTCTGCGAACTCCTG AGCAGCCCTGAACCCGATGTTCGTGAGCAGGCCGTCTGGGCCCTTGGTAACATTGCGGGTGACAGCCCTCAATGC CGTGACTTCGTTCTCAACGCCGGTGCTCTGCGTCCTCTGCTGAACCTCATCAACGATGGCCGGAAGCTGAGCATG CTGCGCAACGCTACCTGGACCCTGAGCAACTTCTGCCGCGGCAAGACGCCTCAGCCTGATTGGAACACTATTGCC CCCGCTCTTCCTGTCCTTGCTAAGCTCATCTACATGCTTGATGATGAAGTCCTGATCGATGCTTGCTGGGCCATC TCCTACCTGTCTGATGGCGCCAACGACAAGATTCAGGCTGTCATCGAGGCCGGCATCCCTCGCCGTCTCGTCGAG CTCCTCATGCACGCCTCGACCTCGGTCCAGACCCCCGCTCTCCGGTCGGTCGGTAACATCGTCACTGGTGACGAC GTCCAGACCCAGGTCATCATCAACTGCGGTGCTCTTCCCGCCCTCCTCGCTCTGCTGAGCTCCACCAAGGACGGT ATCCGTAAGGAGGCGTGCTGGACCATCTCCAACATCACTGCTGGTAACTCCAGCCAGATCCAGGCTGTCGTCGAC GCCGGCATCATCCCTCCCTTGATCAACCTGCTGGCGAACGGTGACTTCAAGACGCGTAAGGAGGCCTGCTGGGCC ATCTCCAACGCCACCTCCGGTGGTCTGCAGAAGCCTGACCAGATCCGCTACCTCGTGTCCCAGGGATGCATCAAG CCCCTGTGCGACCTTCTTGCTTGCCCTGACAACAAGATCATCCAGGTTGCTCTGGATGGTCTGGAGAACATCCTC AAGGTCGGCGAGATGGACAAGGAGGCTGGCCAGTCTGAGGCCAACGTCAACCGCTACGCTCTGTTCATCGAAGAG GCCGGTGGTATGGAGAAGATCCATGACTGCCAGAACAACGCCAACGAGGAGATCTACATGAAGGCATACAACATC ATCGAGAAGTACTTCTCTGATGAGGACGAGGCTGGTGACATTGATGAGGTTGCTCCTCAGCAGACCCAGACTGGA TTCGCCCTCGGCACCACGCAACAGCAGGGCGGATTCAACTTCGCCAACGGTGGTGACTCCATGGATATGTAA |
| Gene | >Ani_SJS100_1|g10993.t1 ATGGCCGAGCGCTATATCCCCGAACATCGTCGCACTCAGTTCAAGGCCCGGAACCAGTTCCGGCCTGACGAGCTT CGTCGTCGTCGTGAGGAACAACAGGTTGAGATCAGAAAGCAGAAGAGAGATGAGAATTTGGCCAAGAGGAGAGGT ATCCAGACCCGCGATGGCGGCATTGGCGTGGGCGGCGGCGTAGCTGCCGAGAGTGATGATGAGGCCAGCGCCATC GAGAGTGAGGTATGCAGTTCCTGCATTTCTTTTTTGTTTGTATCTCATTGTTCGATCTCTTTGTTCCTTTCCCGA CCGGGAGCTGGGCCCATCGGCTGCCCGTTTTCGAATCTTTCTTTCTGGTCGCTCTTGCTTGTCCAGATGCGTCCC AGCGAGAGCTTTTCACCGCTTTGCCGCCGGGCGAGCCCTCATTCGGCTCTGACTGGACAAGCACACGACCAGCAT CATCAAGACTCCCTTCGCGCTCAGCCAAGATGTATTCATTACTGTGCAAAATAGCTAATGGATGGTTTTCTAGCT TAATGTGGAGCTCCCCGAGATGGTTAAGGGCGTCTTCTCCGATCAGATCGACCAGCAGATCCAAGCCACCACCAA GTTCAGGAAATTGCTCTCCAAGGAGCGCAACCCCCCCATTGAGCGTGTCATCGAGACCGGTGTCGTGAGCCGCTT CGTTGAATTCCTCCGATCCCCCCACACTCTTGTTCAGTTCGAAGCTGCTTGGGCTTTGACCAACATTGCCTCTGG TTCCGCCCAACAGACCCAGGTCGTTATCGAGGCTGGTGCTGTACCGATCTTCTGCGAACTCCTGAGCAGCCCTGA ACCCGATGTTCGTGAGCAGGCCGTCTGGGCCCTTGGTAACATTGCGGGTGACAGCCCTCAATGCCGTGACTTCGT TCTCAACGCCGGTGCTCTGCGTCCTCTGCTGAACCTCATCAACGATGGCCGGAAGCTGAGCATGCTGCGCAACGC TACCTGGACCCTGAGCAACTTCTGCCGCGGCAAGACGCCTCAGCCTGATTGGAACACTGTATGTCATCCTATCTG CTCATCCTAACGAGCTTTTGTCGCTAACATTGGATTTCAAAGATTGCCCCCGCTCTTCCTGTCCTTGCTAAGCTC ATCTACATGCTTGATGATGAAGTCCTGATCGATGCTTGCTGGGCCATCTCCTACCTGTCTGATGGCGCCAACGAC AAGATTCAGGCTGTCATCGAGGCCGGCATCCCTCGCCGTCTCGTCGAGCTCCTCATGCACGCCTCGACCTCGGTC CAGACCCCCGCTCTCCGGTCGGTCGGTAACATCGTCACTGGTGACGACGTCCAGACCCAGGTCATCATCAACTGC GGTGCTCTTCCCGCCCTCCTCGCTCTGCTGAGCTCCACCAAGGACGGTATCCGTAAGGAGGCGTGCTGGACCATC TCCAACATCACTGCTGGTAACTCCAGCCAGATCCAGGCTGTCGTCGACGCCGGCATCATCCCTCCCTTGATCAAC CTGCTGGCGAACGGTGACTTCAAGACGCGTAAGGAGGCCTGCTGGGCCATCTCCAACGCCACCTCCGGTGGTCTG CAGAAGCCTGACCAGATCCGCTACCTCGTGTCCCAGGGATGCATCAAGCCCCTGTGCGACCTTCTTGCTTGCCCT GACAACAAGATCATCCAGGTTGCTCTGGATGGTCTGGAGAACATCCTCAAGGTCGGCGAGATGGACAAGGAGGCT GGCCAGTCTGAGGCCAACGTCAACCGCTACGCTCTGTTCATCGAAGAGGCCGGTGGTATGGAGAAGATCCATGAC TGCCAGAACAACGCCAACGAGGAGATCTACATGAAGGCATACAACATCATCGAGAAGTACTTCTCTGATGAGGAC GAGGCTGGTGACATTGATGAGGTTGCTCCTCAGCAGACCCAGACTGGATTCGCCCTCGGCACCACGCAACAGCAG GGCGGATTCAACTTCGCCAACGGTGGTGACTCCATGGATATGTAA |