Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g10952.t1
Gene name
Locationscaffold_143:28720..29346
Strand-
Gene length (bp)626
Transcript length (bp)465
Coding sequence length (bp)465
Protein length (aa) 155

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08570 DUF1761 Protein of unknown function (DUF1761) 7.2E-26 14 140

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 36 0.45

Transmembrane Domains

Domain # Start End Length
1 15 34 19
2 55 77 22
3 92 114 22
4 121 143 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g10952.t1
MTTLNYLPPVKPSAIAAGAIFTHTASLGILAPVFGDTYHRAQAANSKEEFLKSKEAAGAVAAWGTSLVGSSVQTY
GVAALINATGTLSYKGAAYLGSLIFMASAAPGVVSQVFAEKRPLDTVAVGAVSRLFETVGLSLFLTWWGTRTNPF
SSSY*
Coding >Ani_SJS100_1|g10952.t1
ATGACAACCTTGAACTATCTCCCTCCAGTCAAGCCCTCTGCAATTGCGGCAGGTGCTATCTTCACCCACACTGCA
TCCCTCGGCATTCTCGCGCCCGTATTCGGCGATACCTATCACCGCGCCCAAGCAGCCAATTCGAAGGAGGAGTTC
CTTAAATCTAAGGAGGCTGCTGGTGCAGTAGCAGCCTGGGGTACCTCCTTGGTTGGAAGCTCTGTCCAGACATAC
GGAGTAGCAGCTTTGATCAACGCCACAGGTACTTTGAGCTACAAGGGAGCGGCTTATCTTGGCAGCTTGATCTTC
ATGGCCAGCGCAGCCCCCGGTGTTGTGAGCCAGGTTTTTGCCGAAAAGAGACCCCTTGACACTGTTGCCGTAGGT
GCAGTCAGCAGGTTGTTTGAAACAGTGGGACTTAGTCTCTTCCTTACTTGGTGGGGTACTCGCACGAATCCATTT
TCCAGCAGCTATTAA
Transcript >Ani_SJS100_1|g10952.t1
ATGACAACCTTGAACTATCTCCCTCCAGTCAAGCCCTCTGCAATTGCGGCAGGTGCTATCTTCACCCACACTGCA
TCCCTCGGCATTCTCGCGCCCGTATTCGGCGATACCTATCACCGCGCCCAAGCAGCCAATTCGAAGGAGGAGTTC
CTTAAATCTAAGGAGGCTGCTGGTGCAGTAGCAGCCTGGGGTACCTCCTTGGTTGGAAGCTCTGTCCAGACATAC
GGAGTAGCAGCTTTGATCAACGCCACAGGTACTTTGAGCTACAAGGGAGCGGCTTATCTTGGCAGCTTGATCTTC
ATGGCCAGCGCAGCCCCCGGTGTTGTGAGCCAGGTTTTTGCCGAAAAGAGACCCCTTGACACTGTTGCCGTAGGT
GCAGTCAGCAGGTTGTTTGAAACAGTGGGACTTAGTCTCTTCCTTACTTGGTGGGGTACTCGCACGAATCCATTT
TCCAGCAGCTATTAA
Gene >Ani_SJS100_1|g10952.t1
ATGACAACCTTGAACTGTGAGTGCTCGCCTGTCCTCGCAGTGTAGACGACGACCTTCCCCTCTAACCCCAACTCA
TATGAACTAACGTGATTGGCCTAGATCTCCCTCCAGTCAAGCCCTCTGCAATTGCGGCAGGTGCTATCTTCACCC
ACACTGCATCCCTCGGCATTCTCGCGCCCGTATTCGGCGATACCTATCACCGCGCCCAAGCAGCCAATTCGAAGG
AGGAGTTCCTTAAATCTAAGGAGGCTGCTGGTGCAGTAGCAGCCTGGGGTACCTCCTTGGTTGGAAGCTCTGTCC
AGACATACGGAGTAGCAGCTTTGATCAACGCCACAGGTACTTTGAGCTACAAGGGAGCGGCTTATCTTGGCAGCT
TGATCTTCATGGCCAGCGCAGCCCCCGGTGTACGTTCTCCCCACCCCCTTGTTTTCTTTTTCCAACTTGCAAGCT
ATAATATGCTAATCTTGTGTTGATTTGTGTAGGTTGTGAGCCAGGTTTTTGCCGAAAAGAGACCCCTTGACACTG
TTGCCGTAGGTGCAGTCAGCAGGTTGTTTGAAACAGTGGGACTTAGTCTCTTCCTTACTTGGTGGGGTACTCGCA
CGAATCCATTTTCCAGCAGCTATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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