Protein ID | Ani_SJS100_1|g10952.t1 |
Gene name | |
Location | scaffold_143:28720..29346 |
Strand | - |
Gene length (bp) | 626 |
Transcript length (bp) | 465 |
Coding sequence length (bp) | 465 |
Protein length (aa) | 155 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08570 | DUF1761 | Protein of unknown function (DUF1761) | 7.2E-26 | 14 | 140 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 15 | 34 | 19 |
2 | 55 | 77 | 22 |
3 | 92 | 114 | 22 |
4 | 121 | 143 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 1190 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g10952.t1 MTTLNYLPPVKPSAIAAGAIFTHTASLGILAPVFGDTYHRAQAANSKEEFLKSKEAAGAVAAWGTSLVGSSVQTY GVAALINATGTLSYKGAAYLGSLIFMASAAPGVVSQVFAEKRPLDTVAVGAVSRLFETVGLSLFLTWWGTRTNPF SSSY* |
Coding | >Ani_SJS100_1|g10952.t1 ATGACAACCTTGAACTATCTCCCTCCAGTCAAGCCCTCTGCAATTGCGGCAGGTGCTATCTTCACCCACACTGCA TCCCTCGGCATTCTCGCGCCCGTATTCGGCGATACCTATCACCGCGCCCAAGCAGCCAATTCGAAGGAGGAGTTC CTTAAATCTAAGGAGGCTGCTGGTGCAGTAGCAGCCTGGGGTACCTCCTTGGTTGGAAGCTCTGTCCAGACATAC GGAGTAGCAGCTTTGATCAACGCCACAGGTACTTTGAGCTACAAGGGAGCGGCTTATCTTGGCAGCTTGATCTTC ATGGCCAGCGCAGCCCCCGGTGTTGTGAGCCAGGTTTTTGCCGAAAAGAGACCCCTTGACACTGTTGCCGTAGGT GCAGTCAGCAGGTTGTTTGAAACAGTGGGACTTAGTCTCTTCCTTACTTGGTGGGGTACTCGCACGAATCCATTT TCCAGCAGCTATTAA |
Transcript | >Ani_SJS100_1|g10952.t1 ATGACAACCTTGAACTATCTCCCTCCAGTCAAGCCCTCTGCAATTGCGGCAGGTGCTATCTTCACCCACACTGCA TCCCTCGGCATTCTCGCGCCCGTATTCGGCGATACCTATCACCGCGCCCAAGCAGCCAATTCGAAGGAGGAGTTC CTTAAATCTAAGGAGGCTGCTGGTGCAGTAGCAGCCTGGGGTACCTCCTTGGTTGGAAGCTCTGTCCAGACATAC GGAGTAGCAGCTTTGATCAACGCCACAGGTACTTTGAGCTACAAGGGAGCGGCTTATCTTGGCAGCTTGATCTTC ATGGCCAGCGCAGCCCCCGGTGTTGTGAGCCAGGTTTTTGCCGAAAAGAGACCCCTTGACACTGTTGCCGTAGGT GCAGTCAGCAGGTTGTTTGAAACAGTGGGACTTAGTCTCTTCCTTACTTGGTGGGGTACTCGCACGAATCCATTT TCCAGCAGCTATTAA |
Gene | >Ani_SJS100_1|g10952.t1 ATGACAACCTTGAACTGTGAGTGCTCGCCTGTCCTCGCAGTGTAGACGACGACCTTCCCCTCTAACCCCAACTCA TATGAACTAACGTGATTGGCCTAGATCTCCCTCCAGTCAAGCCCTCTGCAATTGCGGCAGGTGCTATCTTCACCC ACACTGCATCCCTCGGCATTCTCGCGCCCGTATTCGGCGATACCTATCACCGCGCCCAAGCAGCCAATTCGAAGG AGGAGTTCCTTAAATCTAAGGAGGCTGCTGGTGCAGTAGCAGCCTGGGGTACCTCCTTGGTTGGAAGCTCTGTCC AGACATACGGAGTAGCAGCTTTGATCAACGCCACAGGTACTTTGAGCTACAAGGGAGCGGCTTATCTTGGCAGCT TGATCTTCATGGCCAGCGCAGCCCCCGGTGTACGTTCTCCCCACCCCCTTGTTTTCTTTTTCCAACTTGCAAGCT ATAATATGCTAATCTTGTGTTGATTTGTGTAGGTTGTGAGCCAGGTTTTTGCCGAAAAGAGACCCCTTGACACTG TTGCCGTAGGTGCAGTCAGCAGGTTGTTTGAAACAGTGGGACTTAGTCTCTTCCTTACTTGGTGGGGTACTCGCA CGAATCCATTTTCCAGCAGCTATTAA |