© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10927.t1 |
| Gene name | |
| Location | scaffold_141:39052..40555 |
| Strand | - |
| Gene length (bp) | 1503 |
| Transcript length (bp) | 1503 |
| Coding sequence length (bp) | 1503 |
| Protein length (aa) | 501 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04120 | Iron_permease | Low affinity iron permease | 1.1E-06 | 295 | 360 |
| PF04120 | Iron_permease | Low affinity iron permease | 1.5E-17 | 392 | 474 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 43 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 59 | 81 | 22 |
| 2 | 91 | 113 | 22 |
| 3 | 187 | 206 | 19 |
| 4 | 216 | 238 | 22 |
| 5 | 290 | 312 | 22 |
| 6 | 327 | 349 | 22 |
| 7 | 401 | 423 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10927.t1 MKYFRPVFRCEFEGAAETQRVTNGKDVKVDTAIVVATEDVSGYRVKASPKLVDRWLDASVRLAGSAPVFLFIIAG LLTWALMGIRFGNSDVWVAAISDVQAILCYVFDSFLMRQLLREYSEQREAIIEIQSRCNSHQRMIASVKKKLGAE GIRRVSEKCNVEPLEALDQGRTQSLFARCVIVSAKTFGHVVSGGLYWVCIFIWLGFGPHCGWSNRWQLYINDATS ALMVLVFAFLACLRECYAEHTNICLDAIFRLDATLEKELRRLSEDDLPNQMEVWLPPKENSLQVLIFYYADVIGT LVGMIFLVLVIIAWAAVGPVFHFNSNWWLLVGTYAGLVGLFDSFVLRNIQGKVQQYIHRQIRVVEKGDLGLFAGL SVAIPSTGSTKRPSLSQHVSRWMNVVSSHLTMVIAGFFLTIGCLVASSAMEWSLTGQLISNVPPSIIETFFMIIL ITGQNDAEASAHIDLTNIYYRRQRLLSFMKHAKKLCEEQKLSEDATVSAP* |
| Coding | >Ani_SJS100_1|g10927.t1 ATGAAATACTTCAGGCCTGTCTTTCGATGCGAGTTTGAGGGGGCGGCAGAGACGCAGCGGGTGACAAATGGGAAG GATGTAAAAGTTGATACCGCTATCGTGGTGGCTACTGAAGATGTCTCCGGGTACAGGGTCAAGGCGAGCCCGAAA CTGGTGGACCGCTGGCTTGATGCGTCAGTCAGGCTGGCTGGGTCGGCCCCAGTCTTTCTATTCATCATCGCTGGC CTGTTAACGTGGGCCTTGATGGGCATTCGTTTCGGCAACTCGGACGTCTGGGTTGCTGCTATCTCCGACGTTCAA GCTATTTTATGTTATGTGTTCGATTCTTTCCTCATGCGCCAGCTGCTCCGCGAGTACTCTGAGCAGCGCGAAGCC ATAATTGAAATTCAGTCTCGGTGTAACAGTCATCAACGCATGATCGCCAGTGTCAAGAAGAAGCTGGGAGCGGAA GGGATTCGTCGTGTTTCCGAGAAGTGCAATGTTGAGCCTCTCGAAGCGCTGGACCAGGGGCGCACGCAGTCTCTC TTTGCCCGGTGCGTCATCGTCTCGGCCAAGACATTCGGACATGTTGTCAGCGGCGGTCTCTACTGGGTCTGCATT TTCATCTGGCTGGGATTCGGCCCGCATTGTGGTTGGTCGAATCGGTGGCAACTCTACATCAACGACGCGACATCG GCGCTGATGGTACTAGTATTTGCGTTCCTGGCCTGCCTGCGGGAATGTTATGCCGAACATACGAATATCTGCCTG GACGCCATCTTCCGACTCGATGCGACTCTCGAGAAGGAGCTTCGTCGCCTCAGCGAGGATGACCTGCCGAACCAG ATGGAGGTTTGGTTGCCTCCCAAGGAGAACTCCCTGCAGGTGTTGATCTTTTACTACGCCGACGTCATTGGCACC TTGGTCGGCATGATCTTCCTCGTGCTGGTAATCATCGCCTGGGCAGCTGTCGGACCTGTCTTTCATTTTAACAGT AATTGGTGGCTGCTCGTCGGCACGTATGCAGGGTTGGTTGGTCTGTTCGACAGTTTCGTCCTCCGCAACATCCAA GGCAAGGTGCAACAGTACATCCATCGTCAGATTCGGGTTGTGGAAAAGGGAGACTTGGGACTCTTCGCGGGACTG TCAGTGGCTATCCCTTCAACTGGAAGCACCAAGCGCCCGTCTCTGAGCCAGCACGTCTCCCGCTGGATGAATGTC GTCAGCTCCCATCTTACAATGGTTATCGCTGGCTTCTTCCTCACCATTGGTTGTCTTGTCGCTTCAAGCGCGATG GAGTGGAGTCTCACTGGACAGTTGATTTCGAACGTGCCTCCCAGCATTATCGAGACATTCTTTATGATCATACTC ATCACTGGTCAGAATGACGCGGAGGCCAGCGCCCATATCGACCTGACAAACATCTACTACCGGCGCCAGCGACTG CTGTCTTTTATGAAGCATGCAAAGAAGCTCTGTGAAGAGCAGAAGCTTTCCGAGGATGCTACGGTTTCTGCACCG TGA |
| Transcript | >Ani_SJS100_1|g10927.t1 ATGAAATACTTCAGGCCTGTCTTTCGATGCGAGTTTGAGGGGGCGGCAGAGACGCAGCGGGTGACAAATGGGAAG GATGTAAAAGTTGATACCGCTATCGTGGTGGCTACTGAAGATGTCTCCGGGTACAGGGTCAAGGCGAGCCCGAAA CTGGTGGACCGCTGGCTTGATGCGTCAGTCAGGCTGGCTGGGTCGGCCCCAGTCTTTCTATTCATCATCGCTGGC CTGTTAACGTGGGCCTTGATGGGCATTCGTTTCGGCAACTCGGACGTCTGGGTTGCTGCTATCTCCGACGTTCAA GCTATTTTATGTTATGTGTTCGATTCTTTCCTCATGCGCCAGCTGCTCCGCGAGTACTCTGAGCAGCGCGAAGCC ATAATTGAAATTCAGTCTCGGTGTAACAGTCATCAACGCATGATCGCCAGTGTCAAGAAGAAGCTGGGAGCGGAA GGGATTCGTCGTGTTTCCGAGAAGTGCAATGTTGAGCCTCTCGAAGCGCTGGACCAGGGGCGCACGCAGTCTCTC TTTGCCCGGTGCGTCATCGTCTCGGCCAAGACATTCGGACATGTTGTCAGCGGCGGTCTCTACTGGGTCTGCATT TTCATCTGGCTGGGATTCGGCCCGCATTGTGGTTGGTCGAATCGGTGGCAACTCTACATCAACGACGCGACATCG GCGCTGATGGTACTAGTATTTGCGTTCCTGGCCTGCCTGCGGGAATGTTATGCCGAACATACGAATATCTGCCTG GACGCCATCTTCCGACTCGATGCGACTCTCGAGAAGGAGCTTCGTCGCCTCAGCGAGGATGACCTGCCGAACCAG ATGGAGGTTTGGTTGCCTCCCAAGGAGAACTCCCTGCAGGTGTTGATCTTTTACTACGCCGACGTCATTGGCACC TTGGTCGGCATGATCTTCCTCGTGCTGGTAATCATCGCCTGGGCAGCTGTCGGACCTGTCTTTCATTTTAACAGT AATTGGTGGCTGCTCGTCGGCACGTATGCAGGGTTGGTTGGTCTGTTCGACAGTTTCGTCCTCCGCAACATCCAA GGCAAGGTGCAACAGTACATCCATCGTCAGATTCGGGTTGTGGAAAAGGGAGACTTGGGACTCTTCGCGGGACTG TCAGTGGCTATCCCTTCAACTGGAAGCACCAAGCGCCCGTCTCTGAGCCAGCACGTCTCCCGCTGGATGAATGTC GTCAGCTCCCATCTTACAATGGTTATCGCTGGCTTCTTCCTCACCATTGGTTGTCTTGTCGCTTCAAGCGCGATG GAGTGGAGTCTCACTGGACAGTTGATTTCGAACGTGCCTCCCAGCATTATCGAGACATTCTTTATGATCATACTC ATCACTGGTCAGAATGACGCGGAGGCCAGCGCCCATATCGACCTGACAAACATCTACTACCGGCGCCAGCGACTG CTGTCTTTTATGAAGCATGCAAAGAAGCTCTGTGAAGAGCAGAAGCTTTCCGAGGATGCTACGGTTTCTGCACCG TGA |
| Gene | >Ani_SJS100_1|g10927.t1 ATGAAATACTTCAGGCCTGTCTTTCGATGCGAGTTTGAGGGGGCGGCAGAGACGCAGCGGGTGACAAATGGGAAG GATGTAAAAGTTGATACCGCTATCGTGGTGGCTACTGAAGATGTCTCCGGGTACAGGGTCAAGGCGAGCCCGAAA CTGGTGGACCGCTGGCTTGATGCGTCAGTCAGGCTGGCTGGGTCGGCCCCAGTCTTTCTATTCATCATCGCTGGC CTGTTAACGTGGGCCTTGATGGGCATTCGTTTCGGCAACTCGGACGTCTGGGTTGCTGCTATCTCCGACGTTCAA GCTATTTTATGTTATGTGTTCGATTCTTTCCTCATGCGCCAGCTGCTCCGCGAGTACTCTGAGCAGCGCGAAGCC ATAATTGAAATTCAGTCTCGGTGTAACAGTCATCAACGCATGATCGCCAGTGTCAAGAAGAAGCTGGGAGCGGAA GGGATTCGTCGTGTTTCCGAGAAGTGCAATGTTGAGCCTCTCGAAGCGCTGGACCAGGGGCGCACGCAGTCTCTC TTTGCCCGGTGCGTCATCGTCTCGGCCAAGACATTCGGACATGTTGTCAGCGGCGGTCTCTACTGGGTCTGCATT TTCATCTGGCTGGGATTCGGCCCGCATTGTGGTTGGTCGAATCGGTGGCAACTCTACATCAACGACGCGACATCG GCGCTGATGGTACTAGTATTTGCGTTCCTGGCCTGCCTGCGGGAATGTTATGCCGAACATACGAATATCTGCCTG GACGCCATCTTCCGACTCGATGCGACTCTCGAGAAGGAGCTTCGTCGCCTCAGCGAGGATGACCTGCCGAACCAG ATGGAGGTTTGGTTGCCTCCCAAGGAGAACTCCCTGCAGGTGTTGATCTTTTACTACGCCGACGTCATTGGCACC TTGGTCGGCATGATCTTCCTCGTGCTGGTAATCATCGCCTGGGCAGCTGTCGGACCTGTCTTTCATTTTAACAGT AATTGGTGGCTGCTCGTCGGCACGTATGCAGGGTTGGTTGGTCTGTTCGACAGTTTCGTCCTCCGCAACATCCAA GGCAAGGTGCAACAGTACATCCATCGTCAGATTCGGGTTGTGGAAAAGGGAGACTTGGGACTCTTCGCGGGACTG TCAGTGGCTATCCCTTCAACTGGAAGCACCAAGCGCCCGTCTCTGAGCCAGCACGTCTCCCGCTGGATGAATGTC GTCAGCTCCCATCTTACAATGGTTATCGCTGGCTTCTTCCTCACCATTGGTTGTCTTGTCGCTTCAAGCGCGATG GAGTGGAGTCTCACTGGACAGTTGATTTCGAACGTGCCTCCCAGCATTATCGAGACATTCTTTATGATCATACTC ATCACTGGTCAGAATGACGCGGAGGCCAGCGCCCATATCGACCTGACAAACATCTACTACCGGCGCCAGCGACTG CTGTCTTTTATGAAGCATGCAAAGAAGCTCTGTGAAGAGCAGAAGCTTTCCGAGGATGCTACGGTTTCTGCACCG TGA |