© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g10898.t1 |
| Gene name | |
| Location | scaffold_140:5045..6873 |
| Strand | - |
| Gene length (bp) | 1828 |
| Transcript length (bp) | 1443 |
| Coding sequence length (bp) | 1443 |
| Protein length (aa) | 481 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.2E-13 | 39 | 385 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 7.4E-06 | 72 | 224 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 30 | 52 | 22 |
| 2 | 73 | 92 | 19 |
| 3 | 102 | 121 | 19 |
| 4 | 128 | 150 | 22 |
| 5 | 165 | 187 | 22 |
| 6 | 200 | 222 | 22 |
| 7 | 256 | 278 | 22 |
| 8 | 319 | 336 | 17 |
| 9 | 346 | 368 | 22 |
| 10 | 375 | 397 | 22 |
| 11 | 407 | 429 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10898.t1 MGFLHFLKTRSGFRVDNSRTTSAATLTLRQSLWPLTLVTILFFLWGFAYGLLDTLNKHFQNTLHITRTRSSGLQA AYFGAYPLASLGYANYILRHFGYKTVFIFGLTLYGIGALCMWPAGLNRSFGGFCAATFVIGSGLGSLETAANPYL TVCGPPKYAEIRINLAQAFNGIGTCVAPALASYVFFTSTEDDVNALKRVQWVYLAIGIFVFVLAGVFFVSTIPEV TDEDMAFQVAETHVGEEDKPFWKQYRLFHATLAQFTYTGAQVAIAGYFINYVVETWPGTTSATGSKYLAGAQGAF AMGRFLGAIIMRFVKARWVFLAYLSLTVAFIAASITQRDQKGIAMLFLTLFFESVCFPTIVALGIRGLGRHYKRG SGFIVGGVSGGAVVPPILGHVADMRNSTGFAMIVPTMFMVVAWTYALAVNFVPAYRDMVDKVGESEIGLRDEASV SPKDVESGGDGLADMEKEKGEETARVEYTR* |
| Coding | >Ani_SJS100_1|g10898.t1 ATGGGGTTCCTCCACTTTCTTAAGACCCGGTCTGGGTTCCGGGTTGACAATAGCAGGACTACTTCTGCAGCTACC CTGACCTTACGCCAGAGTCTTTGGCCCCTGACCCTTGTTACTATACTCTTCTTTCTCTGGGGTTTTGCCTACGGC CTGCTCGACACACTCAATAAACATTTCCAGAACACTCTGCATATCACACGGACACGTTCCTCGGGTCTTCAAGCA GCCTACTTTGGTGCTTATCCTCTTGCATCCTTGGGATATGCAAACTACATACTCCGTCACTTCGGATACAAAACC GTCTTCATCTTCGGGCTCACTCTATATGGCATCGGTGCCCTCTGCATGTGGCCTGCAGGCTTAAACCGATCGTTT GGTGGCTTCTGCGCAGCTACCTTCGTTATTGGCTCGGGCCTAGGATCGTTGGAGACCGCTGCCAACCCGTACCTT ACGGTTTGTGGTCCACCCAAATACGCCGAGATCAGAATCAACCTCGCCCAGGCGTTCAACGGCATCGGCACCTGC GTCGCACCAGCCCTAGCGTCATACGTCTTCTTCACATCCACTGAGGATGACGTGAACGCTCTCAAGCGAGTACAA TGGGTGTATCTAGCCATTGGCATCTTTGTCTTCGTTCTTGCCGGCGTCTTCTTCGTTTCCACCATCCCTGAAGTA ACCGACGAAGACATGGCCTTCCAGGTGGCCGAAACGCACGTTGGCGAAGAGGATAAACCATTTTGGAAACAGTAC AGGCTGTTTCACGCTACGTTGGCGCAATTTACTTATACCGGTGCCCAAGTCGCCATCGCAGGCTACTTCATCAAC TACGTCGTCGAAACCTGGCCCGGAACCACCAGTGCCACCGGCTCCAAATACCTCGCCGGTGCCCAAGGAGCCTTT GCAATGGGCCGATTCCTCGGCGCGATCATCATGAGATTCGTCAAAGCTCGCTGGGTATTCCTAGCATACCTCTCA CTCACCGTAGCATTCATCGCCGCATCCATAACCCAACGTGATCAAAAAGGCATAGCAATGCTCTTCCTCACCCTC TTCTTCGAATCCGTCTGTTTCCCCACCATCGTAGCACTAGGTATCCGCGGTCTCGGCCGACACTACAAGCGCGGC TCGGGCTTCATTGTCGGCGGTGTGTCTGGTGGTGCCGTCGTGCCTCCAATCCTGGGTCATGTAGCCGATATGCGA AATAGTACGGGCTTTGCGATGATCGTTCCGACTATGTTCATGGTTGTGGCGTGGACGTATGCCCTCGCGGTGAAC TTCGTGCCGGCGTATCGGGATATGGTTGATAAGGTGGGGGAGAGTGAAATTGGGTTGAGAGATGAAGCTAGTGTC AGTCCGAAGGATGTTGAAAGTGGTGGTGATGGGTTGGCGGATATGGAGAAAGAGAAAGGAGAGGAAACTGCTCGC GTGGAATACACTAGATAA |
| Transcript | >Ani_SJS100_1|g10898.t1 ATGGGGTTCCTCCACTTTCTTAAGACCCGGTCTGGGTTCCGGGTTGACAATAGCAGGACTACTTCTGCAGCTACC CTGACCTTACGCCAGAGTCTTTGGCCCCTGACCCTTGTTACTATACTCTTCTTTCTCTGGGGTTTTGCCTACGGC CTGCTCGACACACTCAATAAACATTTCCAGAACACTCTGCATATCACACGGACACGTTCCTCGGGTCTTCAAGCA GCCTACTTTGGTGCTTATCCTCTTGCATCCTTGGGATATGCAAACTACATACTCCGTCACTTCGGATACAAAACC GTCTTCATCTTCGGGCTCACTCTATATGGCATCGGTGCCCTCTGCATGTGGCCTGCAGGCTTAAACCGATCGTTT GGTGGCTTCTGCGCAGCTACCTTCGTTATTGGCTCGGGCCTAGGATCGTTGGAGACCGCTGCCAACCCGTACCTT ACGGTTTGTGGTCCACCCAAATACGCCGAGATCAGAATCAACCTCGCCCAGGCGTTCAACGGCATCGGCACCTGC GTCGCACCAGCCCTAGCGTCATACGTCTTCTTCACATCCACTGAGGATGACGTGAACGCTCTCAAGCGAGTACAA TGGGTGTATCTAGCCATTGGCATCTTTGTCTTCGTTCTTGCCGGCGTCTTCTTCGTTTCCACCATCCCTGAAGTA ACCGACGAAGACATGGCCTTCCAGGTGGCCGAAACGCACGTTGGCGAAGAGGATAAACCATTTTGGAAACAGTAC AGGCTGTTTCACGCTACGTTGGCGCAATTTACTTATACCGGTGCCCAAGTCGCCATCGCAGGCTACTTCATCAAC TACGTCGTCGAAACCTGGCCCGGAACCACCAGTGCCACCGGCTCCAAATACCTCGCCGGTGCCCAAGGAGCCTTT GCAATGGGCCGATTCCTCGGCGCGATCATCATGAGATTCGTCAAAGCTCGCTGGGTATTCCTAGCATACCTCTCA CTCACCGTAGCATTCATCGCCGCATCCATAACCCAACGTGATCAAAAAGGCATAGCAATGCTCTTCCTCACCCTC TTCTTCGAATCCGTCTGTTTCCCCACCATCGTAGCACTAGGTATCCGCGGTCTCGGCCGACACTACAAGCGCGGC TCGGGCTTCATTGTCGGCGGTGTGTCTGGTGGTGCCGTCGTGCCTCCAATCCTGGGTCATGTAGCCGATATGCGA AATAGTACGGGCTTTGCGATGATCGTTCCGACTATGTTCATGGTTGTGGCGTGGACGTATGCCCTCGCGGTGAAC TTCGTGCCGGCGTATCGGGATATGGTTGATAAGGTGGGGGAGAGTGAAATTGGGTTGAGAGATGAAGCTAGTGTC AGTCCGAAGGATGTTGAAAGTGGTGGTGATGGGTTGGCGGATATGGAGAAAGAGAAAGGAGAGGAAACTGCTCGC GTGGAATACACTAGATAA |
| Gene | >Ani_SJS100_1|g10898.t1 ATGGGGTTCCTCCACTTTCTTAAGACCCGGTCTGGGTTCCGGGTTGACAATAGCAGGACTACTTCTGCAGCTACC CTGACCTTACGCCAGAGTCTTTGGCCCCTGACCCTTGTTACTATACTCTTCTTTCTCTGGGTAAGCTGTGCACCA GCCCAGCCCTTACTCGATTTAATCGGCTAATACCATTTTCCACCAGGGTTTTGCCTACGGCCTGCTCGACACACT CAATAAACATTTCCAGAACACTCTGCATATCACACGGACACGTTCCTCGGGTCTTCAAGCAGCCTACTTTGGGTC AGTCAGACATTTGCTAGGCTTTGTACATGTGACAATCAACTGATGATCGTTAGTGCTTATCCTCTTGCATCCTTG GGATATGCAAACTACATACTCCGTCACTTCGGATACAAAACCGTCTTCATCTTCGGGCTCACTCTATATGGCATC GGTGCCCTCTGCATGTGGCCTGCAGGCTTAAACCGATCGTTTGGTGGCTTCTGCGCAGCTACCTTCGTTATTGGC TCGGGCCTAGGATCGTTGGAGACCGCTGCCAACCCGTACCTTACGGGTTAGTCAACCATCCATGTCCCGCCTCCA GCTGACGCTTTGAGAGGAAATAGTGAAAAGCCTGCTAACTATTGAAACGATCAGTTTGTGGTCCACCCAAATACG CCGAGATCAGAATCAACCTCGCCCAGGCGTTCAACGGCATCGGCACCTGCGTCGCACCAGCCCTAGCGTCATACG TCTTCTTCACATCCACTGAGGATGACGTGAACGCTCTCAAGCGAGTACAATGGGTGTATCTAGCCATTGGCATCT TTGTCTTCGTTCTTGCCGGCGTCTTCTTCGTTTCCACCATCCCTGAAGTAACCGACGAAGACATGGCCTTCCAGG TGGCCGAAACGCACGTTGGCGAAGAGGATAAACCATTTTGGAAACAGTACAGGCTGTTTCACGCTACGTTGGCGC AATTTACTTATACCGGTGCCCAAGGTACAAACGCCTCCTCCTACGCTCCCTTTACACACTACGATCCAAAATACT AACCTGCTCCTGCTGCTCCATAGTCGCCATCGCAGGCTACTTCATCAACTACGTCGTCGAAACCTGGCCCGGAAC CACCAGTGCCACCGGCTCCAAATACCTCGCCGGTGCCCAAGGAGCCTTTGCAATGGGCCGATTCCTCGGCGCGAT CATCATGAGATTCGTCAAAGCTCGCTGGGTATTCCTAGCATACCTCTCACTCACCGTAGCATTCATCGCCGCATC CATAACCCAACGTGATCAAAAAGGCATAGGTACGTTACCTTTTCCCTCTTTCCATCCATCATCAATCCGTCCAGT CCAAACAAACACCAAAGAAAGAATGAAGATCATCATCATCCTAATCCGCATGTCGATCTATCTAGCAATGCTCTT CCTCACCCTCTTCTTCGAATCCGTCTGTTTCCCCACCATCGTAGCACTAGGTATCCGCGGTCTCGGCCGACACTA CAAGCGCGGCTCGGGCTTCATTGTCGGCGGTGTGTCTGGTGGTGCCGTCGTGCCTCCAATCCTGGGTCATGTAGC CGATATGCGAAATAGTACGGGCTTTGCGATGATCGTTCCGACTATGTTCATGGTTGTGGCGTGGACGTATGCCCT CGCGGTGAACTTCGTGCCGGCGTATCGGGATATGGTTGATAAGGTGGGGGAGAGTGAAATTGGGTTGAGAGATGA AGCTAGTGTCAGTCCGAAGGATGTTGAAAGTGGTGGTGATGGGTTGGCGGATATGGAGAAAGAGAAAGGAGAGGA AACTGCTCGCGTGGAATACACTAGATAA |