© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10888.t1 |
| Gene name | |
| Location | scaffold_139:28579..29892 |
| Strand | + |
| Gene length (bp) | 1313 |
| Transcript length (bp) | 1203 |
| Coding sequence length (bp) | 1203 |
| Protein length (aa) | 401 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06027 | SLC35F | Solute carrier family 35 | 4.3E-91 | 66 | 361 |
| PF08627 | CRT-like | CRT-like, chloroquine-resistance transporter-like | 5.2E-08 | 120 | 251 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 57 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 69 | 91 | 22 |
| 2 | 106 | 126 | 20 |
| 3 | 139 | 158 | 19 |
| 4 | 168 | 187 | 19 |
| 5 | 194 | 216 | 22 |
| 6 | 226 | 243 | 17 |
| 7 | 256 | 274 | 18 |
| 8 | 289 | 311 | 22 |
| 9 | 318 | 340 | 22 |
| 10 | 344 | 362 | 18 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10888.t1 MSADNEKSAAVADVQPQPEYSTEKTEQVHTVTETSEQTSQPHDQEAQQEQQPTQGRAARLFAYMKTRDFWLVLIL GQIIALADISSSTFSTLLSNAGNSIPAFQTLWIYILLNLVYTSITLYKYGFKKWFQMLYRDCWRYFILAFLDVEG NYFMVLAYRYTSLLSAELFSFWTIICVAIISFIFLRVRYHITQYLGIFLACGGLGMLIASDYLRGANYPAEDQVK GDLFALLACTIYAFSNLFEEFMVSKRPMYEVVGQMGFWGMFINGVQCAIFDRSSFHGATWDKKVGGYIAGYTIVL FIFYTLAPIMLRVSSAMFFNISLLTMNFWGLIIGIQVFHYSVQFLYPIAFVLIVIGLFVYFIMEGEMGEAKKPWL GKDQERGVDGVGTGRRAQQTGHAIV* |
| Coding | >Ani_SJS100_1|g10888.t1 ATGTCTGCCGATAATGAAAAGTCCGCGGCCGTTGCCGACGTGCAGCCCCAACCCGAGTATTCCACGGAAAAGACA GAGCAGGTGCATACTGTGACCGAAACGTCGGAGCAGACCAGTCAACCGCATGATCAGGAGGCCCAGCAGGAGCAG CAGCCGACCCAGGGTCGCGCGGCCAGGCTATTTGCCTACATGAAGACCCGCGATTTCTGGTTGGTCTTGATTTTA GGTCAAATCATCGCGCTGGCCGACATCAGCTCCTCCACCTTCTCGACCCTCCTCTCCAACGCGGGCAACAGTATC CCCGCCTTCCAGACCCTTTGGATCTACATCCTGCTCAATCTTGTCTACACCAGCATTACCCTCTACAAGTACGGC TTCAAGAAATGGTTTCAAATGCTTTACCGTGACTGCTGGCGGTACTTCATTCTTGCCTTCCTGGACGTCGAAGGC AACTACTTCATGGTGCTCGCCTACCGCTATACCTCGCTGCTCAGCGCTGAGCTTTTCAGCTTCTGGACCATCATC TGTGTCGCCATCATCTCCTTCATCTTCCTGCGCGTCCGCTACCACATCACCCAGTACCTTGGCATCTTCCTCGCC TGCGGTGGCCTGGGCATGCTCATCGCCTCCGACTACCTGCGCGGTGCCAACTACCCCGCCGAAGATCAAGTGAAG GGTGACCTGTTTGCCCTCCTAGCCTGCACTATCTACGCCTTCAGCAACCTATTTGAAGAGTTCATGGTTTCCAAG CGGCCCATGTATGAGGTCGTCGGCCAGATGGGCTTCTGGGGTATGTTCATCAATGGCGTGCAGTGCGCCATCTTC GACCGAAGCTCCTTCCACGGCGCCACCTGGGACAAGAAAGTCGGCGGGTACATTGCGGGCTACACCATAGTGCTG TTTATCTTCTACACGTTGGCGCCCATCATGCTACGCGTGTCATCGGCCATGTTTTTCAACATCTCCTTGCTGACG ATGAACTTCTGGGGCTTGATCATCGGTATCCAGGTGTTCCATTACTCCGTGCAATTCCTGTATCCCATTGCCTTT GTGCTGATCGTCATTGGCCTGTTTGTGTACTTCATCATGGAGGGCGAGATGGGTGAGGCGAAGAAGCCGTGGCTA GGAAAGGATCAGGAGCGCGGAGTGGATGGTGTGGGAACGGGTCGTCGCGCGCAGCAAACGGGACATGCAATTGTC TAG |
| Transcript | >Ani_SJS100_1|g10888.t1 ATGTCTGCCGATAATGAAAAGTCCGCGGCCGTTGCCGACGTGCAGCCCCAACCCGAGTATTCCACGGAAAAGACA GAGCAGGTGCATACTGTGACCGAAACGTCGGAGCAGACCAGTCAACCGCATGATCAGGAGGCCCAGCAGGAGCAG CAGCCGACCCAGGGTCGCGCGGCCAGGCTATTTGCCTACATGAAGACCCGCGATTTCTGGTTGGTCTTGATTTTA GGTCAAATCATCGCGCTGGCCGACATCAGCTCCTCCACCTTCTCGACCCTCCTCTCCAACGCGGGCAACAGTATC CCCGCCTTCCAGACCCTTTGGATCTACATCCTGCTCAATCTTGTCTACACCAGCATTACCCTCTACAAGTACGGC TTCAAGAAATGGTTTCAAATGCTTTACCGTGACTGCTGGCGGTACTTCATTCTTGCCTTCCTGGACGTCGAAGGC AACTACTTCATGGTGCTCGCCTACCGCTATACCTCGCTGCTCAGCGCTGAGCTTTTCAGCTTCTGGACCATCATC TGTGTCGCCATCATCTCCTTCATCTTCCTGCGCGTCCGCTACCACATCACCCAGTACCTTGGCATCTTCCTCGCC TGCGGTGGCCTGGGCATGCTCATCGCCTCCGACTACCTGCGCGGTGCCAACTACCCCGCCGAAGATCAAGTGAAG GGTGACCTGTTTGCCCTCCTAGCCTGCACTATCTACGCCTTCAGCAACCTATTTGAAGAGTTCATGGTTTCCAAG CGGCCCATGTATGAGGTCGTCGGCCAGATGGGCTTCTGGGGTATGTTCATCAATGGCGTGCAGTGCGCCATCTTC GACCGAAGCTCCTTCCACGGCGCCACCTGGGACAAGAAAGTCGGCGGGTACATTGCGGGCTACACCATAGTGCTG TTTATCTTCTACACGTTGGCGCCCATCATGCTACGCGTGTCATCGGCCATGTTTTTCAACATCTCCTTGCTGACG ATGAACTTCTGGGGCTTGATCATCGGTATCCAGGTGTTCCATTACTCCGTGCAATTCCTGTATCCCATTGCCTTT GTGCTGATCGTCATTGGCCTGTTTGTGTACTTCATCATGGAGGGCGAGATGGGTGAGGCGAAGAAGCCGTGGCTA GGAAAGGATCAGGAGCGCGGAGTGGATGGTGTGGGAACGGGTCGTCGCGCGCAGCAAACGGGACATGCAATTGTC TAG |
| Gene | >Ani_SJS100_1|g10888.t1 ATGTCTGCCGATAATGAAAAGTCCGCGGCCGTTGCCGACGTGCAGCCCCAACCCGAGTATTCCACGGAAAAGACA GAGCAGGTGCATACTGTGACCGAAACGTCGGAGCAGACCAGTCAACCGCATGATCAGGAGGCCCAGCAGGAGCAG CAGCCGACCCAGGGTCGCGCGGCCAGGCTATTTGCCTACATGAAGACCCGCGATTTCTGGTTGGTCTTGATTTTA GGGTGAGTACATCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCT ACGGAGAAAAATACTGTCAGATACTAATCTACAATAGTCAAATCATCGCGCTGGCCGACATCAGCTCCTCCACCT TCTCGACCCTCCTCTCCAACGCGGGCAACAGTATCCCCGCCTTCCAGACCCTTTGGATCTACATCCTGCTCAATC TTGTCTACACCAGCATTACCCTCTACAAGTACGGCTTCAAGAAATGGTTTCAAATGCTTTACCGTGACTGCTGGC GGTACTTCATTCTTGCCTTCCTGGACGTCGAAGGCAACTACTTCATGGTGCTCGCCTACCGCTATACCTCGCTGC TCAGCGCTGAGCTTTTCAGCTTCTGGACCATCATCTGTGTCGCCATCATCTCCTTCATCTTCCTGCGCGTCCGCT ACCACATCACCCAGTACCTTGGCATCTTCCTCGCCTGCGGTGGCCTGGGCATGCTCATCGCCTCCGACTACCTGC GCGGTGCCAACTACCCCGCCGAAGATCAAGTGAAGGGTGACCTGTTTGCCCTCCTAGCCTGCACTATCTACGCCT TCAGCAACCTATTTGAAGAGTTCATGGTTTCCAAGCGGCCCATGTATGAGGTCGTCGGCCAGATGGGCTTCTGGG GTATGTTCATCAATGGCGTGCAGTGCGCCATCTTCGACCGAAGCTCCTTCCACGGCGCCACCTGGGACAAGAAAG TCGGCGGGTACATTGCGGGCTACACCATAGTGCTGTTTATCTTCTACACGTTGGCGCCCATCATGCTACGCGTGT CATCGGCCATGTTTTTCAACATCTCCTTGCTGACGATGAACTTCTGGGGCTTGATCATCGGTATCCAGGTGTTCC ATTACTCCGTGCAATTCCTGTATCCCATTGCCTTTGTGCTGATCGTCATTGGCCTGTTTGTGTACTTCATCATGG AGGGCGAGATGGGTGAGGCGAAGAAGCCGTGGCTAGGAAAGGATCAGGAGCGCGGAGTGGATGGTGTGGGAACGG GTCGTCGCGCGCAGCAAACGGGACATGCAATTGTCTAG |