Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g10878.t1
Gene name
Locationscaffold_139:592..913
Strand+
Gene length (bp)321
Transcript length (bp)321
Coding sequence length (bp)321
Protein length (aa) 107

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 27 0.45

Transmembrane Domains

Domain # Start End Length
1 10 27 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g10878.t1
MPTTFKPVPLFPPTLATLLLSLFVRAADQSTEQKRRRASVKHEDPETDNGVPLALNGRKLPKASETAIGEKPGSD
VPIERNLAANKKKIQQKAKKEAKVAHKKASP*
Coding >Ani_SJS100_1|g10878.t1
ATGCCGACTACCTTCAAGCCGGTTCCTTTGTTCCCCCCTACTCTTGCGACGCTATTGCTGTCGCTGTTCGTTCGA
GCAGCTGACCAGTCAACAGAGCAAAAGCGACGCCGCGCTTCCGTGAAGCACGAGGACCCCGAAACGGACAATGGT
GTACCTCTGGCGCTCAATGGAAGAAAGCTTCCCAAGGCATCGGAAACGGCTATAGGTGAAAAACCTGGTTCTGAC
GTGCCTATCGAAAGAAATCTCGCCGCCAATAAGAAGAAGATTCAGCAGAAGGCAAAGAAGGAGGCGAAAGTGGCT
CATAAAAAAGCCTCTCCGTAG
Transcript >Ani_SJS100_1|g10878.t1
ATGCCGACTACCTTCAAGCCGGTTCCTTTGTTCCCCCCTACTCTTGCGACGCTATTGCTGTCGCTGTTCGTTCGA
GCAGCTGACCAGTCAACAGAGCAAAAGCGACGCCGCGCTTCCGTGAAGCACGAGGACCCCGAAACGGACAATGGT
GTACCTCTGGCGCTCAATGGAAGAAAGCTTCCCAAGGCATCGGAAACGGCTATAGGTGAAAAACCTGGTTCTGAC
GTGCCTATCGAAAGAAATCTCGCCGCCAATAAGAAGAAGATTCAGCAGAAGGCAAAGAAGGAGGCGAAAGTGGCT
CATAAAAAAGCCTCTCCGTAG
Gene >Ani_SJS100_1|g10878.t1
ATGCCGACTACCTTCAAGCCGGTTCCTTTGTTCCCCCCTACTCTTGCGACGCTATTGCTGTCGCTGTTCGTTCGA
GCAGCTGACCAGTCAACAGAGCAAAAGCGACGCCGCGCTTCCGTGAAGCACGAGGACCCCGAAACGGACAATGGT
GTACCTCTGGCGCTCAATGGAAGAAAGCTTCCCAAGGCATCGGAAACGGCTATAGGTGAAAAACCTGGTTCTGAC
GTGCCTATCGAAAGAAATCTCGCCGCCAATAAGAAGAAGATTCAGCAGAAGGCAAAGAAGGAGGCGAAAGTGGCT
CATAAAAAAGCCTCTCCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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