© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10858.t1 |
| Gene name | |
| Location | scaffold_137:37842..38274 |
| Strand | - |
| Gene length (bp) | 432 |
| Transcript length (bp) | 216 |
| Coding sequence length (bp) | 216 |
| Protein length (aa) | 72 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF16561 | AMPK1_CBM | Glycogen recognition site of AMP-activated protein kinase | 7.3E-11 | 4 | 56 |
| PF02922 | CBM_48 | Carbohydrate-binding module 48 (Isoamylase N-terminal domain) | 9.4E-05 | 7 | 58 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016787 | hydrolase activity | No |
| GO:0008150 | biological_process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10858.t1 MGSYTFTWPYNANEVFVTGTFDDWGKTVKLDRVGDVFEKEVPLPVTDEKVHYKVRQQSHALHMTLWRKAVP* |
| Coding | >Ani_SJS100_1|g10858.t1 ATGGGGAGCTACACATTTACATGGCCGTACAATGCGAACGAAGTGTTTGTCACCGGCACATTTGATGACTGGGGC AAGACAGTCAAACTGGATCGCGTAGGCGATGTCTTTGAGAAGGAAGTTCCGCTGCCAGTGACGGATGAGAAGGTG CACTACAAGGTGAGACAGCAGTCGCATGCTCTGCACATGACTCTATGGCGCAAAGCCGTTCCCTGA |
| Transcript | >Ani_SJS100_1|g10858.t1 ATGGGGAGCTACACATTTACATGGCCGTACAATGCGAACGAAGTGTTTGTCACCGGCACATTTGATGACTGGGGC AAGACAGTCAAACTGGATCGCGTAGGCGATGTCTTTGAGAAGGAAGTTCCGCTGCCAGTGACGGATGAGAAGGTG CACTACAAGGTGAGACAGCAGTCGCATGCTCTGCACATGACTCTATGGCGCAAAGCCGTTCCCTGA |
| Gene | >Ani_SJS100_1|g10858.t1 ATGGGGAGCTACACATTTACATGGTAAGTGACATATCTCATTTTCCCACCGTCTAGATCTCCAATTGTGGGGGAT CATCCGCTCCACGACCTTCCTGTGGAAATTCTATTCTATCGGACACCTTCCGTACCAAGCGACAAGCACGAATGG AACAAAGCCTAGCTTTCTTCGGCGTCATGAGCTTAGAACTTTGGGGTGGATTTGATCGTTGACTGATGCGAATTC TCGCTTGCGACCAGGCCGTACAATGCGAACGAAGTGTTTGTCACCGGCACATTTGATGACTGGGGCAAGACAGTC AAACTGGATCGCGTAGGCGATGTCTTTGAGAAGGAAGTTCCGCTGCCAGTGACGGATGAGAAGGTGCACTACAAG GTGAGACAGCAGTCGCATGCTCTGCACATGACTCTATGGCGCAAAGCCGTTCCCTGA |