Protein ID | Ani_SJS100_1|g1085.t1 |
Gene name | |
Location | scaffold_003:794989..797384 |
Strand | + |
Gene length (bp) | 2395 |
Transcript length (bp) | 2268 |
Coding sequence length (bp) | 2268 |
Protein length (aa) | 756 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12513 | SUV3_C | Mitochondrial degradasome RNA helicase subunit C terminal | 1.5E-16 | 632 | 678 |
PF00271 | Helicase_C | Helicase conserved C-terminal domain | 1.2E-08 | 377 | 464 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016817 | hydrolase activity, acting on acid anhydrides | Yes |
GO:0003824 | catalytic activity | No |
GO:0003674 | molecular_function | No |
GO:0016787 | hydrolase activity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 26 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1085.t1 MQSWSRRGNYCLFCTFQSVSRPVRTFVTSPVLQRSGRPSKKQRHLQSLEKKVEEATSTKRSAPPAYTSRRNTRQT LAAKDFAGVVTHALSIYRQNLTDKDDPALANWSRFERTMLNACKMDERKSVGPLRHIKDALHRSYLQNGVRGLIN ELEFHMYAEDVTSRYSAPNLEAQKKVADLRRPAEWYPQARALQRTIHLHVGPTNSGKTYHALKRLEASKRGFYAG PLRLLAQEVFHRFQANGTSCSLITGDDVKIPEDGKPSRIVSNTVEMVSLGDQYEVGVVDEIQMIADPHRGWAWTR AVLGARATELHLCGEVRAVPLIKELAALTGDKLEIHRYERLNPLKVQNRSLKGDLKNLQKGDCLVSFSRVGIHAL KADIEKTTGKRAAIVYGSLPAEIRTQQASLFNDPDNDYDFLVASDAIGMGLNLSCKRIIFETLIKRVPGGLQRLS VPEIKQIGGRAGRYRSAAQQQENGSSSEDDTNVGYVTSLEDIDLPYIREAMESEPPPLVSAGILPPDSVYQKVAA YFPSNVPLEYLIKRLMVVSQVHPLFFLCDPRNQLENAEVIDTVDGLRTADQLTFMASPMHTRLIAGRDAAIAFIQ CVAEHSDGRLLDIQALNLEILEEPVSGNKEYLNELETLHKSVILYLWLSYRCGGVFTDRTLASHVKQLVEERMVR ALTEFSANKKLRKDASLRRQIALQKQIQEQKRLLADADVDSYGTEDETAAVDLSADEEQMEEQLQERPEESGEAP QARAA* |
Coding | >Ani_SJS100_1|g1085.t1 ATGCAGTCATGGAGTCGCAGAGGCAACTATTGCCTCTTCTGCACCTTCCAGTCGGTGTCACGTCCCGTCAGGACA TTTGTGACATCTCCGGTGCTGCAGAGATCCGGGAGGCCTTCCAAGAAACAGCGCCATTTACAAAGCCTTGAAAAG AAAGTCGAGGAAGCTACTTCTACCAAAAGATCTGCTCCCCCGGCCTACACATCGAGAAGGAACACCCGACAAACG CTTGCAGCCAAAGATTTCGCGGGCGTTGTAACACACGCTTTGAGCATCTACCGGCAAAATCTCACAGATAAAGAT GATCCGGCTTTGGCTAATTGGTCCCGGTTTGAACGAACCATGCTGAACGCATGTAAAATGGACGAGCGAAAAAGC GTTGGTCCGTTACGCCATATCAAGGATGCGCTGCATAGATCTTACCTCCAAAATGGTGTTCGCGGTCTGATTAAC GAATTGGAGTTCCACATGTACGCAGAGGATGTCACGTCGAGATACTCAGCCCCCAATCTCGAAGCACAGAAGAAA GTGGCGGATTTGCGACGCCCGGCCGAGTGGTATCCACAAGCTCGCGCTTTGCAGCGAACAATTCATCTGCACGTG GGACCGACCAATTCGGGAAAGACGTATCACGCGCTCAAGCGTTTGGAAGCATCGAAGCGCGGCTTTTACGCTGGG CCCTTGAGGTTGCTGGCACAGGAGGTTTTTCATCGCTTCCAAGCGAATGGAACCTCCTGCAGCCTCATCACTGGT GACGATGTCAAGATCCCGGAAGATGGAAAGCCCTCCAGAATTGTTAGCAACACCGTTGAGATGGTTAGCTTGGGA GACCAATATGAGGTCGGTGTTGTTGACGAGATCCAAATGATTGCAGACCCTCACCGCGGGTGGGCTTGGACTCGT GCCGTGCTCGGTGCGCGTGCCACGGAACTTCATCTCTGCGGTGAAGTCAGAGCTGTGCCCTTGATCAAAGAATTG GCCGCCTTGACTGGCGACAAGCTCGAGATCCATCGGTATGAGCGACTAAATCCGTTGAAAGTTCAGAACCGCAGT CTCAAAGGTGACCTGAAGAATCTTCAAAAGGGAGATTGTTTGGTGTCATTCTCTCGCGTCGGTATCCACGCCTTG AAAGCAGACATTGAGAAGACTACTGGAAAGCGGGCAGCTATCGTCTACGGCAGTCTGCCGGCTGAAATCCGGACC CAGCAAGCCAGTCTGTTCAACGACCCCGACAATGACTACGACTTTCTCGTTGCTAGTGACGCCATCGGTATGGGT TTGAATTTGAGCTGCAAGCGCATCATTTTCGAAACGTTGATCAAACGGGTTCCCGGGGGCCTTCAGAGACTTAGC GTGCCTGAGATCAAGCAGATCGGTGGACGCGCTGGACGGTATCGGTCTGCCGCGCAACAGCAGGAGAATGGAAGC AGCTCCGAGGACGACACCAACGTCGGCTATGTGACTTCTTTGGAAGATATTGATTTACCTTATATTCGCGAGGCA ATGGAGAGCGAACCCCCACCGCTCGTGTCAGCCGGTATCCTCCCTCCCGACTCGGTCTACCAGAAAGTTGCAGCA TACTTCCCGAGCAATGTTCCGCTAGAATACTTGATCAAGCGCTTGATGGTGGTTTCCCAGGTCCACCCGCTGTTT TTCTTGTGTGATCCTCGCAACCAGCTGGAGAACGCCGAGGTCATTGATACTGTCGATGGATTGCGGACGGCAGAC CAGCTTACATTCATGGCCTCGCCTATGCACACCAGGCTCATCGCAGGCCGCGACGCTGCCATTGCTTTTATTCAA TGCGTCGCAGAGCATTCCGATGGTCGTCTGTTAGACATCCAGGCGCTCAACCTTGAGATCTTGGAAGAGCCGGTG TCCGGTAACAAGGAGTACCTTAACGAGCTAGAGACCTTGCACAAATCGGTCATCTTGTATCTGTGGCTCAGTTAC CGGTGTGGCGGAGTTTTCACGGACAGAACATTGGCGTCCCATGTCAAGCAGCTGGTGGAGGAGAGGATGGTTCGA GCATTGACCGAATTTTCGGCCAACAAGAAACTCAGAAAGGATGCCTCTCTTCGACGTCAGATTGCGCTGCAGAAG CAGATTCAGGAGCAGAAACGGCTGCTCGCCGACGCAGATGTTGACTCATATGGCACTGAAGATGAAACTGCCGCC GTTGATCTGTCCGCTGACGAAGAGCAGATGGAAGAGCAGCTGCAAGAGCGGCCTGAAGAGTCTGGAGAAGCTCCC CAAGCGCGCGCTGCATAG |
Transcript | >Ani_SJS100_1|g1085.t1 ATGCAGTCATGGAGTCGCAGAGGCAACTATTGCCTCTTCTGCACCTTCCAGTCGGTGTCACGTCCCGTCAGGACA TTTGTGACATCTCCGGTGCTGCAGAGATCCGGGAGGCCTTCCAAGAAACAGCGCCATTTACAAAGCCTTGAAAAG AAAGTCGAGGAAGCTACTTCTACCAAAAGATCTGCTCCCCCGGCCTACACATCGAGAAGGAACACCCGACAAACG CTTGCAGCCAAAGATTTCGCGGGCGTTGTAACACACGCTTTGAGCATCTACCGGCAAAATCTCACAGATAAAGAT GATCCGGCTTTGGCTAATTGGTCCCGGTTTGAACGAACCATGCTGAACGCATGTAAAATGGACGAGCGAAAAAGC GTTGGTCCGTTACGCCATATCAAGGATGCGCTGCATAGATCTTACCTCCAAAATGGTGTTCGCGGTCTGATTAAC GAATTGGAGTTCCACATGTACGCAGAGGATGTCACGTCGAGATACTCAGCCCCCAATCTCGAAGCACAGAAGAAA GTGGCGGATTTGCGACGCCCGGCCGAGTGGTATCCACAAGCTCGCGCTTTGCAGCGAACAATTCATCTGCACGTG GGACCGACCAATTCGGGAAAGACGTATCACGCGCTCAAGCGTTTGGAAGCATCGAAGCGCGGCTTTTACGCTGGG CCCTTGAGGTTGCTGGCACAGGAGGTTTTTCATCGCTTCCAAGCGAATGGAACCTCCTGCAGCCTCATCACTGGT GACGATGTCAAGATCCCGGAAGATGGAAAGCCCTCCAGAATTGTTAGCAACACCGTTGAGATGGTTAGCTTGGGA GACCAATATGAGGTCGGTGTTGTTGACGAGATCCAAATGATTGCAGACCCTCACCGCGGGTGGGCTTGGACTCGT GCCGTGCTCGGTGCGCGTGCCACGGAACTTCATCTCTGCGGTGAAGTCAGAGCTGTGCCCTTGATCAAAGAATTG GCCGCCTTGACTGGCGACAAGCTCGAGATCCATCGGTATGAGCGACTAAATCCGTTGAAAGTTCAGAACCGCAGT CTCAAAGGTGACCTGAAGAATCTTCAAAAGGGAGATTGTTTGGTGTCATTCTCTCGCGTCGGTATCCACGCCTTG AAAGCAGACATTGAGAAGACTACTGGAAAGCGGGCAGCTATCGTCTACGGCAGTCTGCCGGCTGAAATCCGGACC CAGCAAGCCAGTCTGTTCAACGACCCCGACAATGACTACGACTTTCTCGTTGCTAGTGACGCCATCGGTATGGGT TTGAATTTGAGCTGCAAGCGCATCATTTTCGAAACGTTGATCAAACGGGTTCCCGGGGGCCTTCAGAGACTTAGC GTGCCTGAGATCAAGCAGATCGGTGGACGCGCTGGACGGTATCGGTCTGCCGCGCAACAGCAGGAGAATGGAAGC AGCTCCGAGGACGACACCAACGTCGGCTATGTGACTTCTTTGGAAGATATTGATTTACCTTATATTCGCGAGGCA ATGGAGAGCGAACCCCCACCGCTCGTGTCAGCCGGTATCCTCCCTCCCGACTCGGTCTACCAGAAAGTTGCAGCA TACTTCCCGAGCAATGTTCCGCTAGAATACTTGATCAAGCGCTTGATGGTGGTTTCCCAGGTCCACCCGCTGTTT TTCTTGTGTGATCCTCGCAACCAGCTGGAGAACGCCGAGGTCATTGATACTGTCGATGGATTGCGGACGGCAGAC CAGCTTACATTCATGGCCTCGCCTATGCACACCAGGCTCATCGCAGGCCGCGACGCTGCCATTGCTTTTATTCAA TGCGTCGCAGAGCATTCCGATGGTCGTCTGTTAGACATCCAGGCGCTCAACCTTGAGATCTTGGAAGAGCCGGTG TCCGGTAACAAGGAGTACCTTAACGAGCTAGAGACCTTGCACAAATCGGTCATCTTGTATCTGTGGCTCAGTTAC CGGTGTGGCGGAGTTTTCACGGACAGAACATTGGCGTCCCATGTCAAGCAGCTGGTGGAGGAGAGGATGGTTCGA GCATTGACCGAATTTTCGGCCAACAAGAAACTCAGAAAGGATGCCTCTCTTCGACGTCAGATTGCGCTGCAGAAG CAGATTCAGGAGCAGAAACGGCTGCTCGCCGACGCAGATGTTGACTCATATGGCACTGAAGATGAAACTGCCGCC GTTGATCTGTCCGCTGACGAAGAGCAGATGGAAGAGCAGCTGCAAGAGCGGCCTGAAGAGTCTGGAGAAGCTCCC CAAGCGCGCGCTGCATAG |
Gene | >Ani_SJS100_1|g1085.t1 ATGCAGTCATGGAGTCGCAGAGGCAACTATTGCCTCTTCTGCACCTTCCAGTCGGTGTCACGTCCCGTCAGGACA TTTGTGACATCTCCGGTGCTGCAGAGATCCGGGAGGCCTTCCAAGAAACAGCGCCATTTACAAAGCCTTGAAAAG AAAGTCGAGGAAGCTACTGTACATATCCATCGCCCTACCCCACCACTTGCCGATTATTTCTTAGTTTCAAATGGC TGACTTTTGACCTACTTATAGTCTACCAAAAGATCTGCTCCCCCGGCCTACACATCGAGAAGGAACACCCGACAA ACGCTTGCAGCCAAAGATTTCGCGGGCGTTGTAACACACGCTTTGAGCATCTACCGGCAAAATCTCACAGATAAA GATGATCCGGCTTTGGCTAATTGGTCCCGGTTTGAACGAACCATGCTGAACGCATGTAAAATGGACGAGCGAAAA AGCGTTGGTCCGTTACGCCATATCAAGGATGCGCTGCATAGATCTTACCTCCAAAATGGTGTTCGCGGTCTGATT AACGAATTGGAGTTCCACATGTACGCAGAGGATGTCACGTCGAGATACTCAGCCCCCAATCTCGAAGCACAGAAG AAAGTGGCGGATTTGCGACGCCCGGCCGAGTGGTATCCACAAGCTCGCGCTTTGCAGCGAACAATTCATCTGCAC GTGGGACCGACCAATTCGGGAAAGACGTATCACGCGCTCAAGCGTTTGGAAGCATCGAAGCGCGGCTTTTACGCT GGGCCCTTGAGGTTGCTGGCACAGGAGGTTTTTCATCGCTTCCAAGCGAATGGAACCTCCTGCAGCCTCATCACT GGTGACGATGTCAAGATCCCGGAAGATGGAAAGCCCTCCAGAATTGTTAGCAACACCGTTGAGATGGTTAGCTTG GGAGACCAATATGAGGTCGGTGTTGTTGACGAGATCCAAATGATTGCAGACCCTCACCGCGGGTGGGCTTGGACT CGTGCCGTGCTCGGTGCGCGTGCCACGGAACTTCATCTCTGCGGTGAAGTCAGAGCTGTGCCCTTGATCAAAGAA TTGGCCGCCTTGACTGGCGACAAGCTCGAGATCCATCGGTATGAGCGACTAAATCCGTTGAAAGTTCAGAACCGC AGTCTCAAAGGTGACCTGAAGAATCTTCAAAAGGGAGATTGTTTGGTGTCATTCTCTCGCGTCGGTATCCACGCC TTGAAAGCAGACATTGAGAAGACTACTGGAAAGCGGGCAGCTATCGTCTACGGCAGTCTGCCGGCTGAAATCCGG ACCCAGCAAGCCAGTCTGTTCAACGACCCCGACAATGACTACGACTTTCTCGTTGCTAGTGACGCCATCGGTATG GGTTTGAATTTGTGAGTTGCCTTCTACTTATCGTCATTGTATCGTGTCTAATTGTAGCAGGAGCTGCAAGCGCAT CATTTTCGAAACGTTGATCAAACGGGTTCCCGGGGGCCTTCAGAGACTTAGCGTGCCTGAGATCAAGCAGATCGG TGGACGCGCTGGACGGTATCGGTCTGCCGCGCAACAGCAGGAGAATGGAAGCAGCTCCGAGGACGACACCAACGT CGGCTATGTGACTTCTTTGGAAGATATTGATTTACCTTATATTCGCGAGGCAATGGAGAGCGAACCCCCACCGCT CGTGTCAGCCGGTATCCTCCCTCCCGACTCGGTCTACCAGAAAGTTGCAGCATACTTCCCGAGCAATGTTCCGCT AGAATACTTGATCAAGCGCTTGATGGTGGTTTCCCAGGTCCACCCGCTGTTTTTCTTGTGTGATCCTCGCAACCA GCTGGAGAACGCCGAGGTCATTGATACTGTCGATGGATTGCGGACGGCAGACCAGCTTACATTCATGGCCTCGCC TATGCACACCAGGCTCATCGCAGGCCGCGACGCTGCCATTGCTTTTATTCAATGCGTCGCAGAGCATTCCGATGG TCGTCTGTTAGACATCCAGGCGCTCAACCTTGAGATCTTGGAAGAGCCGGTGTCCGGTAACAAGGAGTACCTTAA CGAGCTAGAGACCTTGCACAAATCGGTCATCTTGTATCTGTGGCTCAGTTACCGGTGTGGCGGAGTTTTCACGGA CAGAACATTGGCGTCCCATGTCAAGCAGCTGGTGGAGGAGAGGATGGTTCGAGCATTGACCGAATTTTCGGCCAA CAAGAAACTCAGAAAGGATGCCTCTCTTCGACGTCAGATTGCGCTGCAGAAGCAGATTCAGGAGCAGAAACGGCT GCTCGCCGACGCAGATGTTGACTCATATGGCACTGAAGATGAAACTGCCGCCGTTGATCTGTCCGCTGACGAAGA GCAGATGGAAGAGCAGCTGCAAGAGCGGCCTGAAGAGTCTGGAGAAGCTCCCCAAGCGCGCGCTGCATAG |