Protein ID | Ani_SJS100_1|g10844.t1 |
Gene name | |
Location | scaffold_136:50867..53981 |
Strand | + |
Gene length (bp) | 3114 |
Transcript length (bp) | 3048 |
Coding sequence length (bp) | 3048 |
Protein length (aa) | 1016 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF16661 | Lactamase_B_6 | Metallo-beta-lactamase superfamily domain | 8.0E-67 | 21 | 256 |
PF13299 | CPSF100_C | Cleavage and polyadenylation factor 2 C-terminal | 9.6E-51 | 829 | 1009 |
PF10996 | Beta-Casp | Beta-Casp domain | 1.4E-13 | 302 | 452 |
PF07521 | RMMBL | Zn-dependent metallo-hydrolase RNA specificity domain | 2.0E-11 | 740 | 800 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 18 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g10844.t1 MFTFTPLLGAQSASSKASQSILELDGGIKILVDVGWDDTFDPLDLQELEKHVPTLSLILLTHATPAHIGAFAHCC KTFPLFTQIPVYATSPVIALGRTLLQDLYASSPLAATFLPKASISEPGASTAAASAAASVAEGDESTEATHAGRI LLQPPTAEEIARYFSLIHPLKYSQPHQPLPSPFSPPLNGLTLTAYNAGHTVGGTIWHIQHGMESIVYAVDWNQAR ESVVAGAAWFGGSGASGTEVIEQLRKPTALVCSTRGGERFALPGGRKKRDDLLLDMIRSTIAKGGTVLIPTDTSA RVLELAYALEHAWRDAAGSGQGDDVLKGAGLYLAGRKANTTMRLARSMLEWMDENIVREFEAAEGVDAATGQSNT EGQRAGQNQGKTEGKGVGPFTFKHLRILERKKRLEKILSDQKPKVILASDTSLDWGFAKDSLRLVAEGANNLLLL TEPLHKERITEGQESTHRKTLGSMIWQWYEERKDGVALEKASDGEMLEQVHSGGRDLSWTDVRRAPLDAGEQLLY QQYLATKRQLQDTSQARGQENLDNAADALDDRSSSTSEDSETEQQGRVLNFSTSLAHSNRNKLGLSDEDLGVNIL LRRKNVYDYDVRGKKGRERMFPYVAPRKKGDEFGEFIRPEEYLRAEEREEADMQQRRTDSQTKLGQKRRWDETAP HGRRLSGSGAKRQALGDAQKRDVSTADELSLAEDGEVDAAVSSEDEVEGQSFEGPAKAVYEKATLTINARLAYVD FTGLHDKRSLEMLIPLIQPRKLILVGGMKQETTALATECQKLLAAKSGMDVSAADSAVIFTPVNGEVVDASVDTN AWMVKLSNNLVRRLKWQHVRSLGVVTLTAQLRGPEQAVLEDSTEENPSKKPKLLEEEKKEEGGSTEVATNAPPEG AKPSADKSEVYPLLDVLPVNMAAGTRSMTRPLHVGDLRLADLRKIMQGAGHTAEFRGEGTLLIDGMVAVRKSATG RIEIEASAQSAAATNLGRGGGSFLAVKQKIYEGLAVVSGS* |
Coding | >Ani_SJS100_1|g10844.t1 ATGTTCACCTTTACCCCTCTTCTCGGCGCACAGTCTGCGTCATCAAAGGCTTCACAATCGATCCTCGAGCTTGAT GGAGGAATCAAGATCCTTGTGGACGTCGGTTGGGATGACACCTTCGATCCTCTCGACCTGCAGGAACTCGAAAAA CATGTCCCGACCTTGTCGCTCATTCTTCTAACCCACGCTACACCCGCTCATATTGGTGCCTTTGCCCATTGTTGC AAGACCTTCCCTCTCTTCACGCAAATTCCCGTCTACGCTACGAGTCCCGTCATTGCGCTCGGTCGCACGTTGCTA CAGGATTTATACGCCTCTTCTCCGCTGGCCGCAACATTCTTACCCAAGGCGTCGATCTCCGAGCCCGGAGCTTCC ACGGCTGCAGCTTCAGCCGCTGCGTCGGTGGCCGAAGGCGACGAAAGCACCGAAGCTACTCATGCCGGGCGCATC CTCCTCCAACCTCCTACCGCCGAAGAAATCGCCCGGTACTTCTCTTTGATACACCCGTTGAAATACTCACAACCA CACCAACCGCTTCCGTCACCATTCTCCCCGCCCTTGAACGGCCTTACGCTGACCGCATACAATGCTGGACACACC GTTGGTGGTACGATATGGCATATACAACATGGCATGGAGTCAATTGTCTACGCGGTCGACTGGAACCAAGCTCGA GAAAGCGTTGTCGCGGGCGCTGCCTGGTTTGGAGGCTCCGGTGCCAGTGGAACGGAGGTCATCGAGCAGCTGCGC AAACCTACGGCGCTGGTATGCAGTACTAGGGGAGGTGAACGCTTCGCGCTGCCCGGAGGCAGGAAGAAGCGGGAT GACTTGCTGCTGGACATGATCCGGAGCACCATCGCCAAGGGTGGCACAGTGCTGATTCCTACGGATACCAGCGCT CGCGTGCTGGAGCTGGCTTATGCGCTGGAACATGCCTGGCGCGATGCGGCAGGCTCTGGCCAGGGCGATGATGTA CTGAAAGGAGCCGGGCTATACCTGGCCGGTCGGAAAGCTAATACTACGATGCGACTGGCAAGGAGTATGTTGGAG TGGATGGACGAAAATATCGTGCGAGAGTTTGAGGCTGCTGAGGGTGTGGATGCAGCGACTGGCCAGTCGAATACA GAAGGGCAACGGGCAGGTCAGAATCAAGGCAAGACAGAAGGAAAGGGCGTGGGACCTTTTACGTTCAAGCATCTC CGAATTTTGGAACGCAAGAAGCGATTAGAGAAGATCCTGTCCGACCAAAAGCCCAAGGTAATTCTGGCTTCCGAT ACGTCGCTGGATTGGGGATTCGCGAAGGACTCTCTACGTCTGGTGGCGGAAGGTGCCAACAACCTACTGCTCTTG ACGGAGCCTCTGCACAAGGAGAGGATCACGGAGGGCCAGGAGAGCACCCACAGGAAGACACTCGGCAGTATGATC TGGCAGTGGTATGAAGAACGAAAGGATGGCGTTGCTCTGGAAAAGGCATCGGACGGCGAGATGCTGGAGCAGGTG CACAGCGGAGGCCGGGATCTCTCCTGGACGGATGTGCGACGTGCGCCTCTGGACGCAGGCGAGCAGCTGCTTTAC CAGCAGTATCTGGCCACGAAACGACAACTTCAAGATACCTCTCAAGCAAGAGGACAGGAAAACCTTGATAATGCC GCCGACGCGCTCGACGACCGGTCAAGCTCTACATCAGAAGACTCGGAGACGGAACAACAGGGCCGCGTCCTGAAT TTCTCCACCTCGTTAGCACACTCCAACCGCAACAAACTCGGCCTCAGCGATGAAGACCTTGGCGTCAACATTCTT CTACGGCGTAAGAATGTCTACGACTACGATGTACGAGGCAAGAAAGGTCGCGAGCGCATGTTTCCGTATGTGGCA CCCCGAAAAAAGGGGGACGAGTTTGGCGAGTTCATCCGGCCTGAGGAGTACCTCCGTGCTGAGGAACGCGAGGAG GCCGACATGCAGCAGCGCCGGACCGACTCCCAGACCAAGCTGGGGCAGAAACGTCGATGGGACGAAACAGCGCCC CATGGACGTCGACTGTCGGGCAGTGGTGCCAAACGCCAAGCGCTTGGAGATGCGCAGAAACGGGATGTCAGCACT GCTGACGAACTGAGCCTCGCCGAAGATGGCGAGGTGGATGCCGCGGTATCTTCGGAGGATGAGGTGGAGGGACAG AGCTTTGAGGGGCCAGCGAAGGCAGTATACGAGAAGGCTACGCTGACCATAAATGCTCGGCTGGCATACGTGGAC TTTACGGGACTACACGACAAGCGCAGTCTGGAGATGCTCATCCCGCTCATCCAGCCCCGGAAGCTGATCCTGGTT GGGGGTATGAAACAGGAGACGACCGCGTTGGCGACCGAATGCCAGAAGCTCCTGGCAGCCAAATCCGGAATGGAC GTTTCGGCCGCAGACTCGGCAGTCATCTTCACGCCGGTCAACGGCGAGGTTGTTGACGCCAGCGTCGACACCAAC GCATGGATGGTCAAGCTGAGCAACAACTTGGTCCGGCGTTTGAAGTGGCAGCACGTACGCAGCCTGGGAGTGGTC ACGCTCACGGCGCAGTTGCGGGGGCCGGAACAGGCCGTCCTGGAGGACTCCACGGAAGAGAACCCCAGCAAGAAG CCAAAGCTGTTGGAAGAGGAGAAGAAGGAAGAAGGAGGTAGCACCGAGGTCGCGACGAACGCACCACCAGAGGGG GCCAAACCATCAGCTGACAAGTCTGAGGTGTACCCACTGCTGGATGTGCTGCCGGTCAACATGGCGGCGGGAACG CGATCCATGACCCGGCCGCTCCATGTGGGCGACCTGCGGCTGGCAGATTTGCGCAAGATCATGCAAGGGGCCGGA CACACGGCGGAATTCAGGGGCGAGGGAACGCTCCTTATCGATGGGATGGTGGCAGTGCGGAAGTCGGCGACGGGG CGGATTGAGATTGAAGCATCGGCGCAGTCTGCGGCGGCGACGAACCTGGGACGAGGAGGAGGGAGCTTCTTGGCT GTGAAGCAGAAGATTTATGAAGGATTGGCTGTTGTGTCGGGGAGTTAG |
Transcript | >Ani_SJS100_1|g10844.t1 ATGTTCACCTTTACCCCTCTTCTCGGCGCACAGTCTGCGTCATCAAAGGCTTCACAATCGATCCTCGAGCTTGAT GGAGGAATCAAGATCCTTGTGGACGTCGGTTGGGATGACACCTTCGATCCTCTCGACCTGCAGGAACTCGAAAAA CATGTCCCGACCTTGTCGCTCATTCTTCTAACCCACGCTACACCCGCTCATATTGGTGCCTTTGCCCATTGTTGC AAGACCTTCCCTCTCTTCACGCAAATTCCCGTCTACGCTACGAGTCCCGTCATTGCGCTCGGTCGCACGTTGCTA CAGGATTTATACGCCTCTTCTCCGCTGGCCGCAACATTCTTACCCAAGGCGTCGATCTCCGAGCCCGGAGCTTCC ACGGCTGCAGCTTCAGCCGCTGCGTCGGTGGCCGAAGGCGACGAAAGCACCGAAGCTACTCATGCCGGGCGCATC CTCCTCCAACCTCCTACCGCCGAAGAAATCGCCCGGTACTTCTCTTTGATACACCCGTTGAAATACTCACAACCA CACCAACCGCTTCCGTCACCATTCTCCCCGCCCTTGAACGGCCTTACGCTGACCGCATACAATGCTGGACACACC GTTGGTGGTACGATATGGCATATACAACATGGCATGGAGTCAATTGTCTACGCGGTCGACTGGAACCAAGCTCGA GAAAGCGTTGTCGCGGGCGCTGCCTGGTTTGGAGGCTCCGGTGCCAGTGGAACGGAGGTCATCGAGCAGCTGCGC AAACCTACGGCGCTGGTATGCAGTACTAGGGGAGGTGAACGCTTCGCGCTGCCCGGAGGCAGGAAGAAGCGGGAT GACTTGCTGCTGGACATGATCCGGAGCACCATCGCCAAGGGTGGCACAGTGCTGATTCCTACGGATACCAGCGCT CGCGTGCTGGAGCTGGCTTATGCGCTGGAACATGCCTGGCGCGATGCGGCAGGCTCTGGCCAGGGCGATGATGTA CTGAAAGGAGCCGGGCTATACCTGGCCGGTCGGAAAGCTAATACTACGATGCGACTGGCAAGGAGTATGTTGGAG TGGATGGACGAAAATATCGTGCGAGAGTTTGAGGCTGCTGAGGGTGTGGATGCAGCGACTGGCCAGTCGAATACA GAAGGGCAACGGGCAGGTCAGAATCAAGGCAAGACAGAAGGAAAGGGCGTGGGACCTTTTACGTTCAAGCATCTC CGAATTTTGGAACGCAAGAAGCGATTAGAGAAGATCCTGTCCGACCAAAAGCCCAAGGTAATTCTGGCTTCCGAT ACGTCGCTGGATTGGGGATTCGCGAAGGACTCTCTACGTCTGGTGGCGGAAGGTGCCAACAACCTACTGCTCTTG ACGGAGCCTCTGCACAAGGAGAGGATCACGGAGGGCCAGGAGAGCACCCACAGGAAGACACTCGGCAGTATGATC TGGCAGTGGTATGAAGAACGAAAGGATGGCGTTGCTCTGGAAAAGGCATCGGACGGCGAGATGCTGGAGCAGGTG CACAGCGGAGGCCGGGATCTCTCCTGGACGGATGTGCGACGTGCGCCTCTGGACGCAGGCGAGCAGCTGCTTTAC CAGCAGTATCTGGCCACGAAACGACAACTTCAAGATACCTCTCAAGCAAGAGGACAGGAAAACCTTGATAATGCC GCCGACGCGCTCGACGACCGGTCAAGCTCTACATCAGAAGACTCGGAGACGGAACAACAGGGCCGCGTCCTGAAT TTCTCCACCTCGTTAGCACACTCCAACCGCAACAAACTCGGCCTCAGCGATGAAGACCTTGGCGTCAACATTCTT CTACGGCGTAAGAATGTCTACGACTACGATGTACGAGGCAAGAAAGGTCGCGAGCGCATGTTTCCGTATGTGGCA CCCCGAAAAAAGGGGGACGAGTTTGGCGAGTTCATCCGGCCTGAGGAGTACCTCCGTGCTGAGGAACGCGAGGAG GCCGACATGCAGCAGCGCCGGACCGACTCCCAGACCAAGCTGGGGCAGAAACGTCGATGGGACGAAACAGCGCCC CATGGACGTCGACTGTCGGGCAGTGGTGCCAAACGCCAAGCGCTTGGAGATGCGCAGAAACGGGATGTCAGCACT GCTGACGAACTGAGCCTCGCCGAAGATGGCGAGGTGGATGCCGCGGTATCTTCGGAGGATGAGGTGGAGGGACAG AGCTTTGAGGGGCCAGCGAAGGCAGTATACGAGAAGGCTACGCTGACCATAAATGCTCGGCTGGCATACGTGGAC TTTACGGGACTACACGACAAGCGCAGTCTGGAGATGCTCATCCCGCTCATCCAGCCCCGGAAGCTGATCCTGGTT GGGGGTATGAAACAGGAGACGACCGCGTTGGCGACCGAATGCCAGAAGCTCCTGGCAGCCAAATCCGGAATGGAC GTTTCGGCCGCAGACTCGGCAGTCATCTTCACGCCGGTCAACGGCGAGGTTGTTGACGCCAGCGTCGACACCAAC GCATGGATGGTCAAGCTGAGCAACAACTTGGTCCGGCGTTTGAAGTGGCAGCACGTACGCAGCCTGGGAGTGGTC ACGCTCACGGCGCAGTTGCGGGGGCCGGAACAGGCCGTCCTGGAGGACTCCACGGAAGAGAACCCCAGCAAGAAG CCAAAGCTGTTGGAAGAGGAGAAGAAGGAAGAAGGAGGTAGCACCGAGGTCGCGACGAACGCACCACCAGAGGGG GCCAAACCATCAGCTGACAAGTCTGAGGTGTACCCACTGCTGGATGTGCTGCCGGTCAACATGGCGGCGGGAACG CGATCCATGACCCGGCCGCTCCATGTGGGCGACCTGCGGCTGGCAGATTTGCGCAAGATCATGCAAGGGGCCGGA CACACGGCGGAATTCAGGGGCGAGGGAACGCTCCTTATCGATGGGATGGTGGCAGTGCGGAAGTCGGCGACGGGG CGGATTGAGATTGAAGCATCGGCGCAGTCTGCGGCGGCGACGAACCTGGGACGAGGAGGAGGGAGCTTCTTGGCT GTGAAGCAGAAGATTTATGAAGGATTGGCTGTTGTGTCGGGGAGTTAG |
Gene | >Ani_SJS100_1|g10844.t1 ATGTTCACCTTTACCCCTCTTCTCGGCGCACAGTCTGCGTCATCAAAGGCTTCACAATCGATCCTCGAGCTTGAT GGAGGAATCAAGATCCTTGTGGACGTCGGTTGGGATGACACCTTCGATCCTCTCGACCTGCAGGAACTCGAAAAG TGAGCTCCCACTGCAGTCCTTGTATATCTATCGGAGGGGTCGATTTTCTGATATAATAATGCTAGACATGTCCCG ACCTTGTCGCTCATTCTTCTAACCCACGCTACACCCGCTCATATTGGTGCCTTTGCCCATTGTTGCAAGACCTTC CCTCTCTTCACGCAAATTCCCGTCTACGCTACGAGTCCCGTCATTGCGCTCGGTCGCACGTTGCTACAGGATTTA TACGCCTCTTCTCCGCTGGCCGCAACATTCTTACCCAAGGCGTCGATCTCCGAGCCCGGAGCTTCCACGGCTGCA GCTTCAGCCGCTGCGTCGGTGGCCGAAGGCGACGAAAGCACCGAAGCTACTCATGCCGGGCGCATCCTCCTCCAA CCTCCTACCGCCGAAGAAATCGCCCGGTACTTCTCTTTGATACACCCGTTGAAATACTCACAACCACACCAACCG CTTCCGTCACCATTCTCCCCGCCCTTGAACGGCCTTACGCTGACCGCATACAATGCTGGACACACCGTTGGTGGT ACGATATGGCATATACAACATGGCATGGAGTCAATTGTCTACGCGGTCGACTGGAACCAAGCTCGAGAAAGCGTT GTCGCGGGCGCTGCCTGGTTTGGAGGCTCCGGTGCCAGTGGAACGGAGGTCATCGAGCAGCTGCGCAAACCTACG GCGCTGGTATGCAGTACTAGGGGAGGTGAACGCTTCGCGCTGCCCGGAGGCAGGAAGAAGCGGGATGACTTGCTG CTGGACATGATCCGGAGCACCATCGCCAAGGGTGGCACAGTGCTGATTCCTACGGATACCAGCGCTCGCGTGCTG GAGCTGGCTTATGCGCTGGAACATGCCTGGCGCGATGCGGCAGGCTCTGGCCAGGGCGATGATGTACTGAAAGGA GCCGGGCTATACCTGGCCGGTCGGAAAGCTAATACTACGATGCGACTGGCAAGGAGTATGTTGGAGTGGATGGAC GAAAATATCGTGCGAGAGTTTGAGGCTGCTGAGGGTGTGGATGCAGCGACTGGCCAGTCGAATACAGAAGGGCAA CGGGCAGGTCAGAATCAAGGCAAGACAGAAGGAAAGGGCGTGGGACCTTTTACGTTCAAGCATCTCCGAATTTTG GAACGCAAGAAGCGATTAGAGAAGATCCTGTCCGACCAAAAGCCCAAGGTAATTCTGGCTTCCGATACGTCGCTG GATTGGGGATTCGCGAAGGACTCTCTACGTCTGGTGGCGGAAGGTGCCAACAACCTACTGCTCTTGACGGAGCCT CTGCACAAGGAGAGGATCACGGAGGGCCAGGAGAGCACCCACAGGAAGACACTCGGCAGTATGATCTGGCAGTGG TATGAAGAACGAAAGGATGGCGTTGCTCTGGAAAAGGCATCGGACGGCGAGATGCTGGAGCAGGTGCACAGCGGA GGCCGGGATCTCTCCTGGACGGATGTGCGACGTGCGCCTCTGGACGCAGGCGAGCAGCTGCTTTACCAGCAGTAT CTGGCCACGAAACGACAACTTCAAGATACCTCTCAAGCAAGAGGACAGGAAAACCTTGATAATGCCGCCGACGCG CTCGACGACCGGTCAAGCTCTACATCAGAAGACTCGGAGACGGAACAACAGGGCCGCGTCCTGAATTTCTCCACC TCGTTAGCACACTCCAACCGCAACAAACTCGGCCTCAGCGATGAAGACCTTGGCGTCAACATTCTTCTACGGCGT AAGAATGTCTACGACTACGATGTACGAGGCAAGAAAGGTCGCGAGCGCATGTTTCCGTATGTGGCACCCCGAAAA AAGGGGGACGAGTTTGGCGAGTTCATCCGGCCTGAGGAGTACCTCCGTGCTGAGGAACGCGAGGAGGCCGACATG CAGCAGCGCCGGACCGACTCCCAGACCAAGCTGGGGCAGAAACGTCGATGGGACGAAACAGCGCCCCATGGACGT CGACTGTCGGGCAGTGGTGCCAAACGCCAAGCGCTTGGAGATGCGCAGAAACGGGATGTCAGCACTGCTGACGAA CTGAGCCTCGCCGAAGATGGCGAGGTGGATGCCGCGGTATCTTCGGAGGATGAGGTGGAGGGACAGAGCTTTGAG GGGCCAGCGAAGGCAGTATACGAGAAGGCTACGCTGACCATAAATGCTCGGCTGGCATACGTGGACTTTACGGGA CTACACGACAAGCGCAGTCTGGAGATGCTCATCCCGCTCATCCAGCCCCGGAAGCTGATCCTGGTTGGGGGTATG AAACAGGAGACGACCGCGTTGGCGACCGAATGCCAGAAGCTCCTGGCAGCCAAATCCGGAATGGACGTTTCGGCC GCAGACTCGGCAGTCATCTTCACGCCGGTCAACGGCGAGGTTGTTGACGCCAGCGTCGACACCAACGCATGGATG GTCAAGCTGAGCAACAACTTGGTCCGGCGTTTGAAGTGGCAGCACGTACGCAGCCTGGGAGTGGTCACGCTCACG GCGCAGTTGCGGGGGCCGGAACAGGCCGTCCTGGAGGACTCCACGGAAGAGAACCCCAGCAAGAAGCCAAAGCTG TTGGAAGAGGAGAAGAAGGAAGAAGGAGGTAGCACCGAGGTCGCGACGAACGCACCACCAGAGGGGGCCAAACCA TCAGCTGACAAGTCTGAGGTGTACCCACTGCTGGATGTGCTGCCGGTCAACATGGCGGCGGGAACGCGATCCATG ACCCGGCCGCTCCATGTGGGCGACCTGCGGCTGGCAGATTTGCGCAAGATCATGCAAGGGGCCGGACACACGGCG GAATTCAGGGGCGAGGGAACGCTCCTTATCGATGGGATGGTGGCAGTGCGGAAGTCGGCGACGGGGCGGATTGAG ATTGAAGCATCGGCGCAGTCTGCGGCGGCGACGAACCTGGGACGAGGAGGAGGGAGCTTCTTGGCTGTGAAGCAG AAGATTTATGAAGGATTGGCTGTTGTGTCGGGGAGTTAG |