Protein ID | Ani_SJS100_1|g1082.t1 |
Gene name | |
Location | scaffold_003:789177..790574 |
Strand | - |
Gene length (bp) | 1397 |
Transcript length (bp) | 1326 |
Coding sequence length (bp) | 1326 |
Protein length (aa) | 442 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00106 | adh_short | short chain dehydrogenase | 2.0E-11 | 54 | 198 |
PF08659 | KR | KR domain | 3.7E-05 | 56 | 224 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 17 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
2 | 260 | 277 | 17 |
3 | 313 | 335 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1082.t1 MPIPIITTAITEGTNSIPHLWTVLKILPWAVLLAALKYYFGGARNTSERLMHSKVVMITGGTSGIGAQVTSALAS RGAQIILLTQHPPTDIFLAEYIEDLRRSTNNQLIYAEQVDLSSLHSIRTFATKWIDNVAPRRLDMVILCGNAAPP VSQKRKLTVDGIDEEWMVNYLANFHLLSILSPALRAQPAHRDVRVVFTTCSSYIGAKWDLRQVEASAAITAAAAA NAEGDNGEGRRVVMKNGKLQREKPKNKKKKKTKGVSLYGLSKLSLMVFAQSFQKHLNSFKRPDGQPCSARVIMVD PGFSRTPGMRRWMTGGSLWGLLVYLVTWPVWWLVLKSPQQGAQSVLYAAMEAEYGRGEGGWMIKECKEVDLARKE VKDEEAGKMLWEFSEKLIEAKERESAVRRALANKEKEVAEENEKNKASGSGAKEQTPGSRRSRKGK* |
Coding | >Ani_SJS100_1|g1082.t1 ATGCCCATCCCCATCATCACCACAGCAATAACAGAGGGCACAAACTCCATCCCGCACCTATGGACAGTTCTCAAA ATCCTCCCCTGGGCGGTCCTCCTCGCCGCCCTGAAATATTATTTCGGGGGCGCCAGAAATACCTCTGAGCGGTTG ATGCATTCGAAAGTCGTTATGATAACTGGCGGCACATCCGGCATCGGCGCCCAAGTAACCTCCGCCCTGGCCTCG CGCGGCGCCCAAATCATCCTCCTAACACAGCACCCCCCCACGGACATCTTCCTGGCCGAATACATCGAGGACCTC CGCCGCAGCACCAACAACCAACTAATCTACGCCGAGCAAGTCGATCTCTCCTCTCTGCACTCCATCCGCACCTTC GCGACGAAATGGATCGACAATGTGGCGCCGCGACGCCTGGACATGGTGATTCTCTGTGGGAATGCGGCGCCGCCT GTATCCCAGAAACGGAAGTTGACAGTGGATGGCATCGACGAGGAGTGGATGGTGAATTACCTAGCGAATTTCCAT CTGTTGAGTATCCTGTCTCCGGCGTTGCGGGCGCAGCCGGCGCATCGGGATGTGAGGGTTGTGTTTACGACGTGC TCGAGTTATATTGGGGCTAAATGGGATCTGAGGCAGGTGGAGGCTTCTGCTGCCATTACTGCTGCTGCTGCTGCG AATGCGGAGGGGGATAATGGTGAAGGGAGGAGGGTGGTGATGAAGAACGGCAAGCTACAACGGGAGAAGCCCAAG AATAAGAAGAAGAAGAAGACTAAGGGAGTCAGTTTGTATGGGCTGAGCAAGCTCTCGCTTATGGTGTTTGCGCAA TCGTTCCAGAAACATCTGAATTCGTTTAAGCGGCCGGATGGACAGCCGTGCAGTGCGCGGGTGATTATGGTGGAT CCGGGTTTTAGTCGCACTCCGGGGATGAGACGGTGGATGACGGGGGGGTCGTTGTGGGGATTGTTGGTGTATCTG GTGACATGGCCGGTGTGGTGGTTGGTGTTGAAGTCGCCGCAGCAGGGGGCGCAGAGTGTGCTGTATGCGGCGATG GAGGCGGAGTATGGGCGTGGTGAGGGGGGTTGGATGATTAAGGAGTGCAAGGAAGTGGATTTGGCAAGGAAGGAG GTGAAGGATGAGGAGGCCGGGAAGATGTTGTGGGAGTTTAGTGAGAAGTTGATTGAGGCTAAAGAGAGGGAGTCG GCGGTGCGGAGGGCGTTGGCGAATAAGGAGAAGGAGGTGGCAGAGGAGAATGAGAAGAATAAGGCATCGGGGTCG GGGGCAAAGGAACAGACGCCGGGGTCGAGGAGGAGTCGGAAGGGGAAATAG |
Transcript | >Ani_SJS100_1|g1082.t1 ATGCCCATCCCCATCATCACCACAGCAATAACAGAGGGCACAAACTCCATCCCGCACCTATGGACAGTTCTCAAA ATCCTCCCCTGGGCGGTCCTCCTCGCCGCCCTGAAATATTATTTCGGGGGCGCCAGAAATACCTCTGAGCGGTTG ATGCATTCGAAAGTCGTTATGATAACTGGCGGCACATCCGGCATCGGCGCCCAAGTAACCTCCGCCCTGGCCTCG CGCGGCGCCCAAATCATCCTCCTAACACAGCACCCCCCCACGGACATCTTCCTGGCCGAATACATCGAGGACCTC CGCCGCAGCACCAACAACCAACTAATCTACGCCGAGCAAGTCGATCTCTCCTCTCTGCACTCCATCCGCACCTTC GCGACGAAATGGATCGACAATGTGGCGCCGCGACGCCTGGACATGGTGATTCTCTGTGGGAATGCGGCGCCGCCT GTATCCCAGAAACGGAAGTTGACAGTGGATGGCATCGACGAGGAGTGGATGGTGAATTACCTAGCGAATTTCCAT CTGTTGAGTATCCTGTCTCCGGCGTTGCGGGCGCAGCCGGCGCATCGGGATGTGAGGGTTGTGTTTACGACGTGC TCGAGTTATATTGGGGCTAAATGGGATCTGAGGCAGGTGGAGGCTTCTGCTGCCATTACTGCTGCTGCTGCTGCG AATGCGGAGGGGGATAATGGTGAAGGGAGGAGGGTGGTGATGAAGAACGGCAAGCTACAACGGGAGAAGCCCAAG AATAAGAAGAAGAAGAAGACTAAGGGAGTCAGTTTGTATGGGCTGAGCAAGCTCTCGCTTATGGTGTTTGCGCAA TCGTTCCAGAAACATCTGAATTCGTTTAAGCGGCCGGATGGACAGCCGTGCAGTGCGCGGGTGATTATGGTGGAT CCGGGTTTTAGTCGCACTCCGGGGATGAGACGGTGGATGACGGGGGGGTCGTTGTGGGGATTGTTGGTGTATCTG GTGACATGGCCGGTGTGGTGGTTGGTGTTGAAGTCGCCGCAGCAGGGGGCGCAGAGTGTGCTGTATGCGGCGATG GAGGCGGAGTATGGGCGTGGTGAGGGGGGTTGGATGATTAAGGAGTGCAAGGAAGTGGATTTGGCAAGGAAGGAG GTGAAGGATGAGGAGGCCGGGAAGATGTTGTGGGAGTTTAGTGAGAAGTTGATTGAGGCTAAAGAGAGGGAGTCG GCGGTGCGGAGGGCGTTGGCGAATAAGGAGAAGGAGGTGGCAGAGGAGAATGAGAAGAATAAGGCATCGGGGTCG GGGGCAAAGGAACAGACGCCGGGGTCGAGGAGGAGTCGGAAGGGGAAATAG |
Gene | >Ani_SJS100_1|g1082.t1 ATGCCCATCCCCATCATCACCACAGCAATAACAGAGGGCACAAACTCCATCCCGCACCTATGGACAGTTCTCAAA ATCCTCCCCTGGGCGGTCCTCCTCGCCGCCCTGAAATATTATTTCGGGGGCGCCAGAAATACCTCTGAGCGGTTG ATGCATTCGAAAGTCGTTATGATAACTGTACTTACCACCCACAATTCCCCTTCCCCCCGCAAACCTCAATACTAA TATATAATTTTACTTGGAAATAGGGCGGCACATCCGGCATCGGCGCCCAAGTAACCTCCGCCCTGGCCTCGCGCG GCGCCCAAATCATCCTCCTAACACAGCACCCCCCCACGGACATCTTCCTGGCCGAATACATCGAGGACCTCCGCC GCAGCACCAACAACCAACTAATCTACGCCGAGCAAGTCGATCTCTCCTCTCTGCACTCCATCCGCACCTTCGCGA CGAAATGGATCGACAATGTGGCGCCGCGACGCCTGGACATGGTGATTCTCTGTGGGAATGCGGCGCCGCCTGTAT CCCAGAAACGGAAGTTGACAGTGGATGGCATCGACGAGGAGTGGATGGTGAATTACCTAGCGAATTTCCATCTGT TGAGTATCCTGTCTCCGGCGTTGCGGGCGCAGCCGGCGCATCGGGATGTGAGGGTTGTGTTTACGACGTGCTCGA GTTATATTGGGGCTAAATGGGATCTGAGGCAGGTGGAGGCTTCTGCTGCCATTACTGCTGCTGCTGCTGCGAATG CGGAGGGGGATAATGGTGAAGGGAGGAGGGTGGTGATGAAGAACGGCAAGCTACAACGGGAGAAGCCCAAGAATA AGAAGAAGAAGAAGACTAAGGGAGTCAGTTTGTATGGGCTGAGCAAGCTCTCGCTTATGGTGTTTGCGCAATCGT TCCAGAAACATCTGAATTCGTTTAAGCGGCCGGATGGACAGCCGTGCAGTGCGCGGGTGATTATGGTGGATCCGG GTTTTAGTCGCACTCCGGGGATGAGACGGTGGATGACGGGGGGGTCGTTGTGGGGATTGTTGGTGTATCTGGTGA CATGGCCGGTGTGGTGGTTGGTGTTGAAGTCGCCGCAGCAGGGGGCGCAGAGTGTGCTGTATGCGGCGATGGAGG CGGAGTATGGGCGTGGTGAGGGGGGTTGGATGATTAAGGAGTGCAAGGAAGTGGATTTGGCAAGGAAGGAGGTGA AGGATGAGGAGGCCGGGAAGATGTTGTGGGAGTTTAGTGAGAAGTTGATTGAGGCTAAAGAGAGGGAGTCGGCGG TGCGGAGGGCGTTGGCGAATAAGGAGAAGGAGGTGGCAGAGGAGAATGAGAAGAATAAGGCATCGGGGTCGGGGG CAAAGGAACAGACGCCGGGGTCGAGGAGGAGTCGGAAGGGGAAATAG |