© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10789.t1 |
| Gene name | |
| Location | scaffold_134:39974..41177 |
| Strand | - |
| Gene length (bp) | 1203 |
| Transcript length (bp) | 1203 |
| Coding sequence length (bp) | 1203 |
| Protein length (aa) | 401 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05704 | Caps_synth | Capsular polysaccharide synthesis protein | 7.6E-14 | 29 | 209 |
| PF04488 | Gly_transf_sug | Glycosyltransferase sugar-binding region containing DXD motif | 6.4E-06 | 104 | 149 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016757 | glycosyltransferase activity | Yes |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10789.t1 MEYSSKQYPVPAGVHIIPEHLLDLRSDSEVDYDLLHPRPVTDEKNIWLFWHSGYSTMHPYTKRNVRAWHRRFSKA GWIVRVVDRHPSSPLNIANFIDVNDSNNFPQAFAEGTISGTYAKQHTSDLVRLPLLLKYGGIYADVGLIQIGDVD RLWRETVGNPDSRFEVLSYNAGDVSERSLTNYFLMSRRDNPLFERCHRLLLKLWEGNTSTEGMHQSPLLKDLPLL TGTGNMTEQQCRELTDYIIQGQVMTLVMGLVDKEDNWDGPKYVAEHVYGIEFMQGSQLINDMTAWDGRKAFELMS LSLPKEGEEETAEQKQAREIVEACLKKSFGFKLAHGYILEVMNVTLGSLWREHEGSDNVPGTYAHWLRHAIVHWS QDALPPTQPYTALEPIKRGPLLRAE* |
| Coding | >Ani_SJS100_1|g10789.t1 ATGGAATATTCCAGCAAACAATACCCCGTACCAGCAGGGGTACACATAATCCCAGAACACCTCCTGGACCTCCGC TCAGACTCCGAAGTCGACTATGACCTCCTCCACCCCCGACCCGTCACAGACGAGAAGAACATTTGGCTTTTCTGG CACAGCGGCTACTCCACCATGCACCCATATACCAAGCGAAACGTGCGCGCATGGCACCGGCGCTTCTCCAAAGCC GGCTGGATTGTGCGTGTCGTCGACCGCCATCCGTCCTCCCCGCTCAACATAGCCAACTTTATCGACGTCAATGAT TCGAACAACTTTCCTCAAGCATTCGCCGAAGGCACCATCAGTGGCACCTACGCAAAGCAGCACACATCCGATCTC GTTCGCCTACCTCTACTTCTCAAGTACGGCGGTATCTATGCCGACGTTGGACTAATCCAGATCGGCGACGTGGAT CGACTGTGGCGCGAGACGGTCGGAAATCCCGACTCGCGGTTCGAGGTTCTTTCCTACAATGCTGGCGATGTCAGC GAGCGCAGTCTCACCAACTATTTTCTTATGTCGAGGCGTGATAATCCGCTATTCGAGCGATGCCACCGTCTACTG TTGAAGTTATGGGAGGGAAATACGAGTACGGAAGGAATGCATCAAAGCCCGCTGTTGAAGGATTTGCCGCTCCTC ACTGGAACCGGTAATATGACAGAGCAGCAGTGCAGAGAGCTGACGGACTATATTATCCAGGGGCAGGTGATGACT CTGGTTATGGGGTTAGTGGATAAAGAAGATAACTGGGATGGACCGAAATATGTCGCGGAACATGTCTATGGCATT GAGTTCATGCAGGGATCGCAGCTGATCAATGACATGACTGCATGGGACGGTCGGAAGGCGTTCGAGCTCATGTCA TTGTCCCTTCCCAAGGAGGGCGAGGAGGAAACCGCAGAGCAGAAGCAGGCTAGGGAGATCGTCGAGGCTTGCCTG AAGAAAAGTTTCGGGTTCAAGCTCGCGCACGGGTATATCTTGGAGGTAATGAACGTGACACTCGGGTCGCTGTGG AGGGAACATGAGGGATCAGATAATGTGCCCGGGACGTATGCGCATTGGCTCAGGCATGCAATCGTGCACTGGAGT CAGGATGCGCTTCCGCCGACACAGCCGTACACGGCACTTGAGCCGATTAAGAGGGGACCGCTATTGCGCGCAGAG TAA |
| Transcript | >Ani_SJS100_1|g10789.t1 ATGGAATATTCCAGCAAACAATACCCCGTACCAGCAGGGGTACACATAATCCCAGAACACCTCCTGGACCTCCGC TCAGACTCCGAAGTCGACTATGACCTCCTCCACCCCCGACCCGTCACAGACGAGAAGAACATTTGGCTTTTCTGG CACAGCGGCTACTCCACCATGCACCCATATACCAAGCGAAACGTGCGCGCATGGCACCGGCGCTTCTCCAAAGCC GGCTGGATTGTGCGTGTCGTCGACCGCCATCCGTCCTCCCCGCTCAACATAGCCAACTTTATCGACGTCAATGAT TCGAACAACTTTCCTCAAGCATTCGCCGAAGGCACCATCAGTGGCACCTACGCAAAGCAGCACACATCCGATCTC GTTCGCCTACCTCTACTTCTCAAGTACGGCGGTATCTATGCCGACGTTGGACTAATCCAGATCGGCGACGTGGAT CGACTGTGGCGCGAGACGGTCGGAAATCCCGACTCGCGGTTCGAGGTTCTTTCCTACAATGCTGGCGATGTCAGC GAGCGCAGTCTCACCAACTATTTTCTTATGTCGAGGCGTGATAATCCGCTATTCGAGCGATGCCACCGTCTACTG TTGAAGTTATGGGAGGGAAATACGAGTACGGAAGGAATGCATCAAAGCCCGCTGTTGAAGGATTTGCCGCTCCTC ACTGGAACCGGTAATATGACAGAGCAGCAGTGCAGAGAGCTGACGGACTATATTATCCAGGGGCAGGTGATGACT CTGGTTATGGGGTTAGTGGATAAAGAAGATAACTGGGATGGACCGAAATATGTCGCGGAACATGTCTATGGCATT GAGTTCATGCAGGGATCGCAGCTGATCAATGACATGACTGCATGGGACGGTCGGAAGGCGTTCGAGCTCATGTCA TTGTCCCTTCCCAAGGAGGGCGAGGAGGAAACCGCAGAGCAGAAGCAGGCTAGGGAGATCGTCGAGGCTTGCCTG AAGAAAAGTTTCGGGTTCAAGCTCGCGCACGGGTATATCTTGGAGGTAATGAACGTGACACTCGGGTCGCTGTGG AGGGAACATGAGGGATCAGATAATGTGCCCGGGACGTATGCGCATTGGCTCAGGCATGCAATCGTGCACTGGAGT CAGGATGCGCTTCCGCCGACACAGCCGTACACGGCACTTGAGCCGATTAAGAGGGGACCGCTATTGCGCGCAGAG TAA |
| Gene | >Ani_SJS100_1|g10789.t1 ATGGAATATTCCAGCAAACAATACCCCGTACCAGCAGGGGTACACATAATCCCAGAACACCTCCTGGACCTCCGC TCAGACTCCGAAGTCGACTATGACCTCCTCCACCCCCGACCCGTCACAGACGAGAAGAACATTTGGCTTTTCTGG CACAGCGGCTACTCCACCATGCACCCATATACCAAGCGAAACGTGCGCGCATGGCACCGGCGCTTCTCCAAAGCC GGCTGGATTGTGCGTGTCGTCGACCGCCATCCGTCCTCCCCGCTCAACATAGCCAACTTTATCGACGTCAATGAT TCGAACAACTTTCCTCAAGCATTCGCCGAAGGCACCATCAGTGGCACCTACGCAAAGCAGCACACATCCGATCTC GTTCGCCTACCTCTACTTCTCAAGTACGGCGGTATCTATGCCGACGTTGGACTAATCCAGATCGGCGACGTGGAT CGACTGTGGCGCGAGACGGTCGGAAATCCCGACTCGCGGTTCGAGGTTCTTTCCTACAATGCTGGCGATGTCAGC GAGCGCAGTCTCACCAACTATTTTCTTATGTCGAGGCGTGATAATCCGCTATTCGAGCGATGCCACCGTCTACTG TTGAAGTTATGGGAGGGAAATACGAGTACGGAAGGAATGCATCAAAGCCCGCTGTTGAAGGATTTGCCGCTCCTC ACTGGAACCGGTAATATGACAGAGCAGCAGTGCAGAGAGCTGACGGACTATATTATCCAGGGGCAGGTGATGACT CTGGTTATGGGGTTAGTGGATAAAGAAGATAACTGGGATGGACCGAAATATGTCGCGGAACATGTCTATGGCATT GAGTTCATGCAGGGATCGCAGCTGATCAATGACATGACTGCATGGGACGGTCGGAAGGCGTTCGAGCTCATGTCA TTGTCCCTTCCCAAGGAGGGCGAGGAGGAAACCGCAGAGCAGAAGCAGGCTAGGGAGATCGTCGAGGCTTGCCTG AAGAAAAGTTTCGGGTTCAAGCTCGCGCACGGGTATATCTTGGAGGTAATGAACGTGACACTCGGGTCGCTGTGG AGGGAACATGAGGGATCAGATAATGTGCCCGGGACGTATGCGCATTGGCTCAGGCATGCAATCGTGCACTGGAGT CAGGATGCGCTTCCGCCGACACAGCCGTACACGGCACTTGAGCCGATTAAGAGGGGACCGCTATTGCGCGCAGAG TAA |