© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10725.t1 |
| Gene name | |
| Location | scaffold_130:35760..37727 |
| Strand | - |
| Gene length (bp) | 1967 |
| Transcript length (bp) | 1653 |
| Coding sequence length (bp) | 1653 |
| Protein length (aa) | 551 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11786 | Aft1_HRA | Aft1 HRA domain | 2.5E-25 | 156 | 224 |
| PF11787 | Aft1_HRR | Aft1 HRR domain | 1.8E-24 | 230 | 302 |
| PF11785 | Aft1_OSA | Aft1 osmotic stress response (OSM) domain | 9.9E-21 | 79 | 132 |
| PF00170 | bZIP_1 | bZIP transcription factor | 3.0E-12 | 440 | 496 |
| PF07716 | bZIP_2 | Basic region leucine zipper | 5.8E-05 | 446 | 490 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | Yes |
| GO:0003700 | DNA-binding transcription factor activity | Yes |
| GO:0051171 | regulation of nitrogen compound metabolic process | No |
| GO:0140110 | transcription regulator activity | No |
| GO:0031323 | regulation of cellular metabolic process | No |
| GO:0060255 | regulation of macromolecule metabolic process | No |
| GO:0050789 | regulation of biological process | No |
| GO:0010556 | regulation of macromolecule biosynthetic process | No |
| GO:0065007 | biological regulation | No |
| GO:0003674 | molecular_function | No |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
| GO:0031326 | regulation of cellular biosynthetic process | No |
| GO:0010468 | regulation of gene expression | No |
| GO:0009889 | regulation of biosynthetic process | No |
| GO:0051252 | regulation of RNA metabolic process | No |
| GO:1903506 | regulation of nucleic acid-templated transcription | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0019222 | regulation of metabolic process | No |
| GO:2001141 | regulation of RNA biosynthetic process | No |
| GO:0080090 | regulation of primary metabolic process | No |
| GO:0008150 | biological_process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 39 | 61 | 22 |
| Transcription Factor Class (based on PFAM domains) |
|---|
| bZIP |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10725.t1 MDAKKAGLDEDPLPLRLRPGPPHLANLFHSTPVSDNLTVAYFIIVIVIVVVGVVILTRTFAPDTDSRATSSDLKD TKPDVDPQTSLAPPPRPAITSATDTPDYFNSVHNPFSLEPNPFEQSFGSGGSSGETPGKSILPPVAALTSPALPG TSSAGGGYGWSNSLRSGPLSPAMLAGPTGTSDYFDSIGRGFPTPNESSLRTGLTPGGGGSMFPAPSPNSQALLQQ LQSGGATPSTIEFHRTALNAAKKNSLGGPTSNPTSEPDPATQNSNMDIKPNPPAGSDPFGHHDAADAANGLFMLA KGGQANPNQFTVSNQASIQPQSIQANDQQLDAGADRRNSQNMNGVSGRETSGDASDMQGEQTKPAAKGKAKKNTG TKASTAANNRRKAEDAPKGSNKKAKTSNGSGSVEPPSDVGDSEDDEDDMKRKNSTDTKKMTDEEKRKNFLERNRV AALKCRQRKKQWLANLQAKVELFTSENDALTATVTQLREEIVNLKTLLLAHKDCPVSQAQGLGPLMMNGMSAGFD AHPYNIPNGMAMQPGAPIPAQGLRR* |
| Coding | >Ani_SJS100_1|g10725.t1 ATGGATGCGAAAAAGGCGGGTCTAGACGAAGATCCCCTTCCTCTCAGACTTCGGCCTGGACCGCCTCATTTGGCC AACCTCTTTCATTCTACCCCTGTTTCAGATAACCTCACTGTCGCGTACTTCATCATCGTCATTGTTATTGTCGTT GTCGGTGTTGTCATACTAACGCGCACATTTGCTCCGGATACAGACTCCCGGGCGACCTCTTCGGATCTTAAAGAT ACCAAGCCTGATGTAGATCCTCAAACCTCGTTGGCGCCGCCTCCGCGACCAGCCATAACAAGCGCGACTGATACC CCCGATTACTTCAACTCCGTCCACAACCCTTTCTCTCTGGAACCCAATCCCTTCGAGCAATCTTTCGGCAGTGGT GGTTCCTCGGGCGAAACACCCGGAAAGTCGATCCTTCCTCCTGTTGCAGCACTTACTTCTCCTGCCCTGCCGGGC ACAAGCTCTGCCGGTGGCGGCTACGGCTGGTCCAACTCTCTGCGCTCCGGGCCGCTGAGTCCTGCTATGCTCGCC GGCCCGACTGGCACGAGCGATTATTTTGACAGTATTGGCAGGGGCTTCCCTACCCCTAACGAGTCTTCTCTCCGC ACTGGATTGACCCCGGGCGGAGGGGGGTCTATGTTTCCTGCTCCTAGCCCCAACTCTCAGGCACTCCTGCAGCAG CTGCAGAGTGGTGGTGCGACACCGTCGACCATTGAGTTTCACCGTACTGCTCTTAACGCTGCCAAGAAGAACAGC TTAGGTGGCCCAACCTCTAACCCCACTTCCGAACCTGATCCAGCGACGCAAAACTCCAATATGGATATTAAGCCG AACCCGCCTGCAGGTTCCGACCCATTTGGTCATCATGACGCTGCTGATGCGGCTAACGGGCTTTTCATGCTGGCC AAGGGCGGACAGGCGAACCCCAATCAGTTCACTGTATCGAACCAAGCATCGATTCAGCCACAAAGTATTCAGGCC AATGACCAGCAACTTGATGCTGGCGCCGATAGACGTAACTCGCAAAACATGAATGGTGTATCAGGCAGAGAGACC AGCGGTGACGCCTCTGACATGCAGGGTGAGCAGACGAAGCCCGCTGCCAAGGGCAAAGCCAAAAAGAACACTGGC ACAAAAGCCAGCACCGCAGCAAACAACAGGCGCAAAGCAGAAGATGCACCTAAGGGTTCAAACAAGAAGGCCAAA ACGAGTAACGGGTCTGGTAGTGTTGAGCCTCCTTCCGATGTTGGGGATTCCGAAGACGATGAAGATGATATGAAG AGAAAGAACTCGACAGACACGAAGAAAATGACTGATGAAGAGAAGAGAAAGAACTTTCTCGAGAGGAACAGGGTT GCGGCGCTCAAGTGTCGCCAGCGAAAGAAGCAGTGGCTTGCCAACCTTCAAGCGAAGGTGGAATTGTTCACCTCC GAGAATGATGCGCTTACCGCCACTGTCACGCAGCTCCGTGAGGAAATCGTCAATCTCAAGACTTTGTTGCTTGCG CATAAAGACTGCCCAGTCTCCCAGGCCCAAGGTTTAGGCCCTCTCATGATGAATGGCATGTCGGCAGGATTTGAT GCGCATCCATACAACATCCCTAACGGTATGGCAATGCAACCTGGAGCACCTATCCCTGCTCAGGGGCTACGACGG TAA |
| Transcript | >Ani_SJS100_1|g10725.t1 ATGGATGCGAAAAAGGCGGGTCTAGACGAAGATCCCCTTCCTCTCAGACTTCGGCCTGGACCGCCTCATTTGGCC AACCTCTTTCATTCTACCCCTGTTTCAGATAACCTCACTGTCGCGTACTTCATCATCGTCATTGTTATTGTCGTT GTCGGTGTTGTCATACTAACGCGCACATTTGCTCCGGATACAGACTCCCGGGCGACCTCTTCGGATCTTAAAGAT ACCAAGCCTGATGTAGATCCTCAAACCTCGTTGGCGCCGCCTCCGCGACCAGCCATAACAAGCGCGACTGATACC CCCGATTACTTCAACTCCGTCCACAACCCTTTCTCTCTGGAACCCAATCCCTTCGAGCAATCTTTCGGCAGTGGT GGTTCCTCGGGCGAAACACCCGGAAAGTCGATCCTTCCTCCTGTTGCAGCACTTACTTCTCCTGCCCTGCCGGGC ACAAGCTCTGCCGGTGGCGGCTACGGCTGGTCCAACTCTCTGCGCTCCGGGCCGCTGAGTCCTGCTATGCTCGCC GGCCCGACTGGCACGAGCGATTATTTTGACAGTATTGGCAGGGGCTTCCCTACCCCTAACGAGTCTTCTCTCCGC ACTGGATTGACCCCGGGCGGAGGGGGGTCTATGTTTCCTGCTCCTAGCCCCAACTCTCAGGCACTCCTGCAGCAG CTGCAGAGTGGTGGTGCGACACCGTCGACCATTGAGTTTCACCGTACTGCTCTTAACGCTGCCAAGAAGAACAGC TTAGGTGGCCCAACCTCTAACCCCACTTCCGAACCTGATCCAGCGACGCAAAACTCCAATATGGATATTAAGCCG AACCCGCCTGCAGGTTCCGACCCATTTGGTCATCATGACGCTGCTGATGCGGCTAACGGGCTTTTCATGCTGGCC AAGGGCGGACAGGCGAACCCCAATCAGTTCACTGTATCGAACCAAGCATCGATTCAGCCACAAAGTATTCAGGCC AATGACCAGCAACTTGATGCTGGCGCCGATAGACGTAACTCGCAAAACATGAATGGTGTATCAGGCAGAGAGACC AGCGGTGACGCCTCTGACATGCAGGGTGAGCAGACGAAGCCCGCTGCCAAGGGCAAAGCCAAAAAGAACACTGGC ACAAAAGCCAGCACCGCAGCAAACAACAGGCGCAAAGCAGAAGATGCACCTAAGGGTTCAAACAAGAAGGCCAAA ACGAGTAACGGGTCTGGTAGTGTTGAGCCTCCTTCCGATGTTGGGGATTCCGAAGACGATGAAGATGATATGAAG AGAAAGAACTCGACAGACACGAAGAAAATGACTGATGAAGAGAAGAGAAAGAACTTTCTCGAGAGGAACAGGGTT GCGGCGCTCAAGTGTCGCCAGCGAAAGAAGCAGTGGCTTGCCAACCTTCAAGCGAAGGTGGAATTGTTCACCTCC GAGAATGATGCGCTTACCGCCACTGTCACGCAGCTCCGTGAGGAAATCGTCAATCTCAAGACTTTGTTGCTTGCG CATAAAGACTGCCCAGTCTCCCAGGCCCAAGGTTTAGGCCCTCTCATGATGAATGGCATGTCGGCAGGATTTGAT GCGCATCCATACAACATCCCTAACGGTATGGCAATGCAACCTGGAGCACCTATCCCTGCTCAGGGGCTACGACGG TAA |
| Gene | >Ani_SJS100_1|g10725.t1 ATGGATGCGAAAAAGGCGGGTCTAGACGAAGGTGAGTGTTGTGCATCTTTAAGAAAAAACTGTTTCGATCCTTCG TTTTGCGCGCGTGGAACTCTGGTACCTCCCATGCCCCAAACTCCCGAATATCTGCTGTATCTTGCACTTCCTTAC TTCATCATCGACCCTTGACCTGTTCTGGCTTGGTTGTACGCCACTGTTCCCCCAAATGTTCTGTTGACTACCCGC CGCCGTCGGGATGACCTCACAATTGGCGTCATCGATGGGGGGTCACTGTTATCAGATCCCCTTCCTCTCAGACTT CGGCCTGGACCGCCTCATTTGGCCAACCTCTTTCATTCTACCCCTGTTTCAGATAACCTCACTGTCGCGTACTTC ATCATCGTCATTGTTATTGTCGTTGTCGGTGTTGTCATACTAACGCGCACATTTGCTCCGGATACAGACTCCCGG GCGACCTCTTCGGATCTTAAAGATACCAAGCCTGATGTAGATCCTCAAACCTCGTTGGCGCCGCCTCCGCGACCA GCCATAACAAGCGCGACTGATACCCCCGATTACTTCAACTCCGTCCACAACCCTTTCTCTCTGGAACCCAATCCC TTCGAGCAATCTTTCGGCAGTGGTGGTTCCTCGGGCGAAACACCCGGAAAGTCGATCCTTCCTCCTGTTGCAGCA CTTACTTCTCCTGCCCTGCCGGGCACAAGCTCTGCCGGTGGCGGCTACGGCTGGTCCAACTCTCTGCGCTCCGGG CCGCTGAGTCCTGCTATGCTCGCCGGCCCGACTGGCACGAGCGATTATTTTGACAGTATTGGCAGGGGCTTCCCT ACCCCTAACGAGTCTTCTCTCCGCACTGGATTGACCCCGGGCGGAGGGGGGTCTATGTTTCCTGCTCCTAGCCCC AACTCTCAGGCACTCCTGCAGCAGCTGCAGAGTGGTGGTGCGACACCGTCGACCATTGAGTTTCACCGTACTGCT CTTAACGCTGCCAAGAAGAACAGCTTAGGTGGCCCAACCTCTAACCCCACTTCCGAACCTGATCCAGCGACGCAA AACTCCAATATGGATATTAAGCCGAACCCGCCTGCAGGTTCCGACCCATTTGGTCATCATGACGCTGCTGATGCG GCTAACGGGCTTTTCATGCTGGCCAAGGGCGGACAGGCGAACCCCAATCAGTTCACTGTATCGAACCAAGCATCG ATTCAGCCACAAAGTATTCAGGCCAATGACCAGCAACTTGATGCTGGCGCCGATAGACGTAACTCGCAAAACATG AATGGTGTATCAGGCAGAGAGACCAGCGGTGACGCCTCTGACATGCAGGGTGAGCAGACGAAGCCCGCTGCCAAG GGCAAAGCCAAAAAGAACACTGGCACAAAAGCCAGCACCGCAGCAAACAACAGGCGCAAAGCAGAAGATGCACCT AAGGGTTCAAACAAGAAGGCCAAAACGAGTAACGGGTCTGGTAGTGTTGAGCCTCCTTCCGATGTTGGGGATTCC GAAGACGATGAAGATGATATGAAGAGAAAGAACTCGACAGACACGAAGAAAATGACTGATGAAGAGAAGAGAAAG AACTTTCTCGAGAGGAACAGGTAAGAAGCGCTTTTTACCATTTGGTGCGTTCAAGTTATTGGCTTGGTGCTAACG TTCTTTGTAGGGTTGCGGCGCTCAAGTGTCGCCAGCGAAAGAAGCAGTGGCTTGCCAACCTTCAAGCGAAGGTGG AATTGTTCACCTCCGAGAATGATGCGCTTACCGCCACTGTCACGCAGCTCCGTGAGGAAATCGTCAATCTCAAGA CTTTGTTGCTTGCGCATAAAGACTGCCCAGTCTCCCAGGCCCAAGGTTTAGGCCCTCTCATGATGAATGGCATGT CGGCAGGATTTGATGCGCATCCATACAACATCCCTAACGGTATGGCAATGCAACCTGGAGCACCTATCCCTGCTC AGGGGCTACGACGGTAA |