Protein ID | Ani_SJS100_1|g10687.t1 |
Gene name | |
Location | scaffold_128:17907..18819 |
Strand | - |
Gene length (bp) | 912 |
Transcript length (bp) | 912 |
Coding sequence length (bp) | 912 |
Protein length (aa) | 304 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05241 | EBP | EXPERA (EXPanded EBP superfamily) | 1.1E-17 | 156 | 276 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 22 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 66 | 88 | 22 |
2 | 108 | 130 | 22 |
3 | 177 | 199 | 22 |
4 | 218 | 237 | 19 |
5 | 252 | 274 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g10687.t1 MAFITSLDSLWAASSLQFDNAFQFIKSLAGNHTDIPKTTETILESQIGWSNPPDPSNMPFNIDFQMIFSLFYFLI IFLIPVFLTNYLLPATSHPRRDRFLFGWHLFDALVHFGMEGLFLFHCFFSYAPISPSESRDPVFLGDKDHVYGAT YSNSPTAKLWHEYAQADHRWGGADPTIISIELITVIFGGITASLISYWVYQAPCRQPREKEAIKGKMWFMMIVLA TAEIYGGFMTFLPEMLTGNTALATDSFLYFVLYIVIFNGLWVVVPGWILWEAWKEFTGSFNVIKKQRDNSSPRHK LGR* |
Coding | >Ani_SJS100_1|g10687.t1 ATGGCATTTATAACATCGCTCGACTCCCTTTGGGCGGCTTCGAGCCTCCAATTCGACAACGCCTTCCAATTTATA AAATCCCTCGCCGGCAACCATACCGACATTCCAAAGACAACCGAGACAATACTAGAAAGCCAGATTGGCTGGTCC AATCCTCCAGACCCGTCCAACATGCCATTCAATATCGATTTTCAGATGATTTTCTCGTTGTTCTACTTCCTCATC ATCTTCCTTATACCTGTCTTCCTCACCAACTATCTCCTCCCTGCCACGAGCCACCCCAGACGCGATCGCTTTCTG TTCGGATGGCACCTATTCGATGCCCTCGTCCACTTCGGCATGGAAGGGCTCTTCCTCTTCCACTGCTTCTTCAGC TACGCCCCTATCTCCCCCAGCGAGAGCCGCGACCCCGTCTTCCTCGGCGACAAAGACCACGTTTACGGCGCCACA TACTCCAACTCACCAACCGCCAAACTGTGGCATGAGTACGCTCAAGCAGACCACCGCTGGGGTGGTGCCGACCCC ACCATCATCTCCATCGAGCTGATCACTGTGATCTTCGGCGGTATCACCGCCTCCTTGATCAGCTATTGGGTCTAC CAGGCGCCCTGCCGGCAGCCGAGGGAGAAGGAAGCGATCAAGGGAAAGATGTGGTTCATGATGATTGTGCTAGCG ACGGCTGAGATATACGGAGGCTTCATGACCTTCCTGCCGGAGATGCTGACTGGTAATACGGCGTTGGCCACTGAT AGTTTCCTGTATTTCGTGCTGTATATTGTTATCTTCAACGGCCTCTGGGTCGTTGTCCCTGGCTGGATTCTGTGG GAGGCGTGGAAGGAGTTCACGGGCTCCTTCAATGTCATTAAGAAACAGCGGGACAACAGCTCCCCCAGGCACAAG CTTGGAAGGTGA |
Transcript | >Ani_SJS100_1|g10687.t1 ATGGCATTTATAACATCGCTCGACTCCCTTTGGGCGGCTTCGAGCCTCCAATTCGACAACGCCTTCCAATTTATA AAATCCCTCGCCGGCAACCATACCGACATTCCAAAGACAACCGAGACAATACTAGAAAGCCAGATTGGCTGGTCC AATCCTCCAGACCCGTCCAACATGCCATTCAATATCGATTTTCAGATGATTTTCTCGTTGTTCTACTTCCTCATC ATCTTCCTTATACCTGTCTTCCTCACCAACTATCTCCTCCCTGCCACGAGCCACCCCAGACGCGATCGCTTTCTG TTCGGATGGCACCTATTCGATGCCCTCGTCCACTTCGGCATGGAAGGGCTCTTCCTCTTCCACTGCTTCTTCAGC TACGCCCCTATCTCCCCCAGCGAGAGCCGCGACCCCGTCTTCCTCGGCGACAAAGACCACGTTTACGGCGCCACA TACTCCAACTCACCAACCGCCAAACTGTGGCATGAGTACGCTCAAGCAGACCACCGCTGGGGTGGTGCCGACCCC ACCATCATCTCCATCGAGCTGATCACTGTGATCTTCGGCGGTATCACCGCCTCCTTGATCAGCTATTGGGTCTAC CAGGCGCCCTGCCGGCAGCCGAGGGAGAAGGAAGCGATCAAGGGAAAGATGTGGTTCATGATGATTGTGCTAGCG ACGGCTGAGATATACGGAGGCTTCATGACCTTCCTGCCGGAGATGCTGACTGGTAATACGGCGTTGGCCACTGAT AGTTTCCTGTATTTCGTGCTGTATATTGTTATCTTCAACGGCCTCTGGGTCGTTGTCCCTGGCTGGATTCTGTGG GAGGCGTGGAAGGAGTTCACGGGCTCCTTCAATGTCATTAAGAAACAGCGGGACAACAGCTCCCCCAGGCACAAG CTTGGAAGGTGA |
Gene | >Ani_SJS100_1|g10687.t1 ATGGCATTTATAACATCGCTCGACTCCCTTTGGGCGGCTTCGAGCCTCCAATTCGACAACGCCTTCCAATTTATA AAATCCCTCGCCGGCAACCATACCGACATTCCAAAGACAACCGAGACAATACTAGAAAGCCAGATTGGCTGGTCC AATCCTCCAGACCCGTCCAACATGCCATTCAATATCGATTTTCAGATGATTTTCTCGTTGTTCTACTTCCTCATC ATCTTCCTTATACCTGTCTTCCTCACCAACTATCTCCTCCCTGCCACGAGCCACCCCAGACGCGATCGCTTTCTG TTCGGATGGCACCTATTCGATGCCCTCGTCCACTTCGGCATGGAAGGGCTCTTCCTCTTCCACTGCTTCTTCAGC TACGCCCCTATCTCCCCCAGCGAGAGCCGCGACCCCGTCTTCCTCGGCGACAAAGACCACGTTTACGGCGCCACA TACTCCAACTCACCAACCGCCAAACTGTGGCATGAGTACGCTCAAGCAGACCACCGCTGGGGTGGTGCCGACCCC ACCATCATCTCCATCGAGCTGATCACTGTGATCTTCGGCGGTATCACCGCCTCCTTGATCAGCTATTGGGTCTAC CAGGCGCCCTGCCGGCAGCCGAGGGAGAAGGAAGCGATCAAGGGAAAGATGTGGTTCATGATGATTGTGCTAGCG ACGGCTGAGATATACGGAGGCTTCATGACCTTCCTGCCGGAGATGCTGACTGGTAATACGGCGTTGGCCACTGAT AGTTTCCTGTATTTCGTGCTGTATATTGTTATCTTCAACGGCCTCTGGGTCGTTGTCCCTGGCTGGATTCTGTGG GAGGCGTGGAAGGAGTTCACGGGCTCCTTCAATGTCATTAAGAAACAGCGGGACAACAGCTCCCCCAGGCACAAG CTTGGAAGGTGA |