© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10687.t1 |
| Gene name | |
| Location | scaffold_128:17907..18819 |
| Strand | - |
| Gene length (bp) | 912 |
| Transcript length (bp) | 912 |
| Coding sequence length (bp) | 912 |
| Protein length (aa) | 304 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05241 | EBP | EXPERA (EXPanded EBP superfamily) | 1.1E-17 | 156 | 276 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 66 | 88 | 22 |
| 2 | 108 | 130 | 22 |
| 3 | 177 | 199 | 22 |
| 4 | 218 | 237 | 19 |
| 5 | 252 | 274 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10687.t1 MAFITSLDSLWAASSLQFDNAFQFIKSLAGNHTDIPKTTETILESQIGWSNPPDPSNMPFNIDFQMIFSLFYFLI IFLIPVFLTNYLLPATSHPRRDRFLFGWHLFDALVHFGMEGLFLFHCFFSYAPISPSESRDPVFLGDKDHVYGAT YSNSPTAKLWHEYAQADHRWGGADPTIISIELITVIFGGITASLISYWVYQAPCRQPREKEAIKGKMWFMMIVLA TAEIYGGFMTFLPEMLTGNTALATDSFLYFVLYIVIFNGLWVVVPGWILWEAWKEFTGSFNVIKKQRDNSSPRHK LGR* |
| Coding | >Ani_SJS100_1|g10687.t1 ATGGCATTTATAACATCGCTCGACTCCCTTTGGGCGGCTTCGAGCCTCCAATTCGACAACGCCTTCCAATTTATA AAATCCCTCGCCGGCAACCATACCGACATTCCAAAGACAACCGAGACAATACTAGAAAGCCAGATTGGCTGGTCC AATCCTCCAGACCCGTCCAACATGCCATTCAATATCGATTTTCAGATGATTTTCTCGTTGTTCTACTTCCTCATC ATCTTCCTTATACCTGTCTTCCTCACCAACTATCTCCTCCCTGCCACGAGCCACCCCAGACGCGATCGCTTTCTG TTCGGATGGCACCTATTCGATGCCCTCGTCCACTTCGGCATGGAAGGGCTCTTCCTCTTCCACTGCTTCTTCAGC TACGCCCCTATCTCCCCCAGCGAGAGCCGCGACCCCGTCTTCCTCGGCGACAAAGACCACGTTTACGGCGCCACA TACTCCAACTCACCAACCGCCAAACTGTGGCATGAGTACGCTCAAGCAGACCACCGCTGGGGTGGTGCCGACCCC ACCATCATCTCCATCGAGCTGATCACTGTGATCTTCGGCGGTATCACCGCCTCCTTGATCAGCTATTGGGTCTAC CAGGCGCCCTGCCGGCAGCCGAGGGAGAAGGAAGCGATCAAGGGAAAGATGTGGTTCATGATGATTGTGCTAGCG ACGGCTGAGATATACGGAGGCTTCATGACCTTCCTGCCGGAGATGCTGACTGGTAATACGGCGTTGGCCACTGAT AGTTTCCTGTATTTCGTGCTGTATATTGTTATCTTCAACGGCCTCTGGGTCGTTGTCCCTGGCTGGATTCTGTGG GAGGCGTGGAAGGAGTTCACGGGCTCCTTCAATGTCATTAAGAAACAGCGGGACAACAGCTCCCCCAGGCACAAG CTTGGAAGGTGA |
| Transcript | >Ani_SJS100_1|g10687.t1 ATGGCATTTATAACATCGCTCGACTCCCTTTGGGCGGCTTCGAGCCTCCAATTCGACAACGCCTTCCAATTTATA AAATCCCTCGCCGGCAACCATACCGACATTCCAAAGACAACCGAGACAATACTAGAAAGCCAGATTGGCTGGTCC AATCCTCCAGACCCGTCCAACATGCCATTCAATATCGATTTTCAGATGATTTTCTCGTTGTTCTACTTCCTCATC ATCTTCCTTATACCTGTCTTCCTCACCAACTATCTCCTCCCTGCCACGAGCCACCCCAGACGCGATCGCTTTCTG TTCGGATGGCACCTATTCGATGCCCTCGTCCACTTCGGCATGGAAGGGCTCTTCCTCTTCCACTGCTTCTTCAGC TACGCCCCTATCTCCCCCAGCGAGAGCCGCGACCCCGTCTTCCTCGGCGACAAAGACCACGTTTACGGCGCCACA TACTCCAACTCACCAACCGCCAAACTGTGGCATGAGTACGCTCAAGCAGACCACCGCTGGGGTGGTGCCGACCCC ACCATCATCTCCATCGAGCTGATCACTGTGATCTTCGGCGGTATCACCGCCTCCTTGATCAGCTATTGGGTCTAC CAGGCGCCCTGCCGGCAGCCGAGGGAGAAGGAAGCGATCAAGGGAAAGATGTGGTTCATGATGATTGTGCTAGCG ACGGCTGAGATATACGGAGGCTTCATGACCTTCCTGCCGGAGATGCTGACTGGTAATACGGCGTTGGCCACTGAT AGTTTCCTGTATTTCGTGCTGTATATTGTTATCTTCAACGGCCTCTGGGTCGTTGTCCCTGGCTGGATTCTGTGG GAGGCGTGGAAGGAGTTCACGGGCTCCTTCAATGTCATTAAGAAACAGCGGGACAACAGCTCCCCCAGGCACAAG CTTGGAAGGTGA |
| Gene | >Ani_SJS100_1|g10687.t1 ATGGCATTTATAACATCGCTCGACTCCCTTTGGGCGGCTTCGAGCCTCCAATTCGACAACGCCTTCCAATTTATA AAATCCCTCGCCGGCAACCATACCGACATTCCAAAGACAACCGAGACAATACTAGAAAGCCAGATTGGCTGGTCC AATCCTCCAGACCCGTCCAACATGCCATTCAATATCGATTTTCAGATGATTTTCTCGTTGTTCTACTTCCTCATC ATCTTCCTTATACCTGTCTTCCTCACCAACTATCTCCTCCCTGCCACGAGCCACCCCAGACGCGATCGCTTTCTG TTCGGATGGCACCTATTCGATGCCCTCGTCCACTTCGGCATGGAAGGGCTCTTCCTCTTCCACTGCTTCTTCAGC TACGCCCCTATCTCCCCCAGCGAGAGCCGCGACCCCGTCTTCCTCGGCGACAAAGACCACGTTTACGGCGCCACA TACTCCAACTCACCAACCGCCAAACTGTGGCATGAGTACGCTCAAGCAGACCACCGCTGGGGTGGTGCCGACCCC ACCATCATCTCCATCGAGCTGATCACTGTGATCTTCGGCGGTATCACCGCCTCCTTGATCAGCTATTGGGTCTAC CAGGCGCCCTGCCGGCAGCCGAGGGAGAAGGAAGCGATCAAGGGAAAGATGTGGTTCATGATGATTGTGCTAGCG ACGGCTGAGATATACGGAGGCTTCATGACCTTCCTGCCGGAGATGCTGACTGGTAATACGGCGTTGGCCACTGAT AGTTTCCTGTATTTCGTGCTGTATATTGTTATCTTCAACGGCCTCTGGGTCGTTGTCCCTGGCTGGATTCTGTGG GAGGCGTGGAAGGAGTTCACGGGCTCCTTCAATGTCATTAAGAAACAGCGGGACAACAGCTCCCCCAGGCACAAG CTTGGAAGGTGA |