© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10670.t1 |
| Gene name | |
| Location | scaffold_127:39008..40257 |
| Strand | + |
| Gene length (bp) | 1249 |
| Transcript length (bp) | 1188 |
| Coding sequence length (bp) | 1188 |
| Protein length (aa) | 396 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 6.8E-30 | 28 | 376 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 66 | 88 | 22 |
| 2 | 95 | 113 | 18 |
| 3 | 123 | 145 | 22 |
| 4 | 157 | 179 | 22 |
| 5 | 189 | 211 | 22 |
| 6 | 286 | 308 | 22 |
| 7 | 323 | 345 | 22 |
| 8 | 352 | 374 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 152 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10670.t1 MPQDVEHITTRHRRLLQKIDWRLLPPWAFIYLLNYLDRSNIGNARVLNAETGDSLEQQTGLTDAGYSVTLTLFAI AYSLFDIPSNWVLKRYARPSYWLGALVLCWGAVTLSFARVDNVATVVALRVLVGIFEAGFFPGMVYLITFWYRQG ERSIRIAFVLATSTLAGAVGGCIAYGVGFMNGTGGLEGFRWLFIIEGAVTVVVAPLVIPALPNYPSTAKWLNLSE QRFAAERLEEDGGVPTRVRSSRQEILETICSPRMVLYYIAYLTNNIAMSSLAYFSPTIVRGLGYSSVTAQLMTVP PWAVGYIISMLLADSPDGFNARGLHVALAGLLAGTGFLAARLLPVTAYLARYGCLIVASCGVFPSAAPLTAWVMC NTHADTGARGGCCGRLVFVL* |
| Coding | >Ani_SJS100_1|g10670.t1 ATGCCTCAGGATGTAGAGCACATCACCACGCGCCACCGACGGCTCCTTCAGAAAATAGACTGGCGTCTCCTCCCT CCCTGGGCGTTCATTTACCTCCTTAACTACCTCGACCGCTCCAACATCGGCAATGCCCGTGTCCTCAACGCAGAG ACGGGCGACTCACTCGAGCAGCAAACCGGCTTGACGGATGCTGGCTACTCAGTCACGCTCACGCTCTTTGCCATC GCCTACTCGCTGTTTGACATCCCTTCGAACTGGGTCCTAAAGCGCTACGCGCGGCCATCGTATTGGCTCGGCGCA TTGGTGCTCTGTTGGGGAGCAGTGACTCTTAGTTTTGCAAGAGTCGATAATGTCGCCACTGTGGTGGCTTTGCGC GTGTTGGTTGGGATCTTCGAGGCTGGTTTCTTCCCGGGGATGGTCTACCTGATAACGTTTTGGTATCGCCAGGGG GAGCGCTCGATCCGCATTGCATTTGTTCTTGCTACGTCGACGCTTGCAGGCGCCGTTGGCGGATGTATTGCGTAC GGAGTGGGATTTATGAACGGCACCGGTGGGCTCGAGGGCTTCCGCTGGCTTTTCATTATCGAGGGTGCGGTGACT GTTGTCGTCGCACCGCTTGTCATCCCTGCTCTCCCCAACTACCCATCGACCGCAAAGTGGCTGAACCTATCCGAG CAGCGGTTTGCGGCCGAGCGGCTGGAGGAGGATGGTGGCGTGCCGACAAGAGTTCGCTCGTCAAGACAAGAGATC CTTGAGACGATATGTAGCCCGCGGATGGTGCTGTACTATATTGCCTATCTCACAAACAACATTGCAATGAGTTCG CTCGCTTACTTCAGCCCGACCATTGTCCGTGGCCTCGGCTACTCCTCCGTCACCGCGCAGCTCATGACCGTACCC CCCTGGGCCGTCGGTTACATCATCTCCATGCTGCTCGCCGACTCCCCTGACGGCTTCAACGCGCGCGGCCTGCAC GTCGCCCTGGCAGGCTTGCTCGCAGGAACAGGCTTCCTCGCCGCCCGCCTCCTCCCAGTGACCGCGTACCTCGCC CGGTACGGTTGCCTGATTGTCGCTTCATGCGGTGTGTTCCCTAGCGCCGCGCCGCTGACCGCGTGGGTGATGTGC AACACGCACGCGGACACTGGGGCTCGCGGCGGCTGTTGCGGGCGCCTTGTTTTTGTTCTATAG |
| Transcript | >Ani_SJS100_1|g10670.t1 ATGCCTCAGGATGTAGAGCACATCACCACGCGCCACCGACGGCTCCTTCAGAAAATAGACTGGCGTCTCCTCCCT CCCTGGGCGTTCATTTACCTCCTTAACTACCTCGACCGCTCCAACATCGGCAATGCCCGTGTCCTCAACGCAGAG ACGGGCGACTCACTCGAGCAGCAAACCGGCTTGACGGATGCTGGCTACTCAGTCACGCTCACGCTCTTTGCCATC GCCTACTCGCTGTTTGACATCCCTTCGAACTGGGTCCTAAAGCGCTACGCGCGGCCATCGTATTGGCTCGGCGCA TTGGTGCTCTGTTGGGGAGCAGTGACTCTTAGTTTTGCAAGAGTCGATAATGTCGCCACTGTGGTGGCTTTGCGC GTGTTGGTTGGGATCTTCGAGGCTGGTTTCTTCCCGGGGATGGTCTACCTGATAACGTTTTGGTATCGCCAGGGG GAGCGCTCGATCCGCATTGCATTTGTTCTTGCTACGTCGACGCTTGCAGGCGCCGTTGGCGGATGTATTGCGTAC GGAGTGGGATTTATGAACGGCACCGGTGGGCTCGAGGGCTTCCGCTGGCTTTTCATTATCGAGGGTGCGGTGACT GTTGTCGTCGCACCGCTTGTCATCCCTGCTCTCCCCAACTACCCATCGACCGCAAAGTGGCTGAACCTATCCGAG CAGCGGTTTGCGGCCGAGCGGCTGGAGGAGGATGGTGGCGTGCCGACAAGAGTTCGCTCGTCAAGACAAGAGATC CTTGAGACGATATGTAGCCCGCGGATGGTGCTGTACTATATTGCCTATCTCACAAACAACATTGCAATGAGTTCG CTCGCTTACTTCAGCCCGACCATTGTCCGTGGCCTCGGCTACTCCTCCGTCACCGCGCAGCTCATGACCGTACCC CCCTGGGCCGTCGGTTACATCATCTCCATGCTGCTCGCCGACTCCCCTGACGGCTTCAACGCGCGCGGCCTGCAC GTCGCCCTGGCAGGCTTGCTCGCAGGAACAGGCTTCCTCGCCGCCCGCCTCCTCCCAGTGACCGCGTACCTCGCC CGGTACGGTTGCCTGATTGTCGCTTCATGCGGTGTGTTCCCTAGCGCCGCGCCGCTGACCGCGTGGGTGATGTGC AACACGCACGCGGACACTGGGGCTCGCGGCGGCTGTTGCGGGCGCCTTGTTTTTGTTCTATAG |
| Gene | >Ani_SJS100_1|g10670.t1 ATGCCTCAGGATGTAGAGCACATCACCACGCGCCACCGACGGCTCCTTCAGAAAATAGACTGGCGTCTCCTCCCT CCCTGGGCGTTCATTTACCTCCTTAACTACCTCGACCGCTCCAACATCGGCAATGCCCGTGTCCTCAACGCAGAG ACGGGCGACTCACTCGAGCAGCAAACCGGCTTGACGGATGCTGGCTACTCAGTCACGCTCACGCTCTTTGCCATC GCCTACTCGCTGTTTGACATCCCTTCGAACTGGGTCCTAAAGCGCTACGCGCGGCCATCGTATTGGCTCGGCGCA TTGGTGCTCTGTTGGGGAGCAGTGACTCTTAGTTTTGCAAGAGTCGATAATGTCGCCACTGTGGTGGCTTTGCGC GTGTTGGTTGGGATCTTCGAGGCTGGTTTCTTCCCGGGGATGGTCTACCTGATAACGTTTTGGTATCGCCAGGGG GAGCGCTCGATCCGCATTGCATTTGTTCTTGCTACGTCGACGCTTGCAGGCGCCGTTGGCGGATGTATTGCGTAC GGAGTGGGATTTATGAACGGCACCGGTGGGCTCGAGGGCTTCCGCTGGCTTTTCATTATCGAGGGTGCGGTGACT GTTGTCGTCGCACCGCTTGTCATCCCTGCTCTCCCCAACTACCCATCGACCGCAAAGTGGCTGAACCTATCCGAG CAGCGGTTTGCGGCCGAGCGGCTGGAGGAGGATGGTGGCGTGCCGACAAGAGTTCGCTCGTCAAGACAAGAGATC CTTGAGACGATATGTAGCCCGCGGATGGTGCTGTACTATATTGCCTATGTAACCCTTACCTCTTATTCCTGCCAT GAAAGAAGAAAGCTCAGCTGATGTCCTTGCCCAGCTCACAAACAACATTGCAATGAGTTCGCTCGCTTACTTCAG CCCGACCATTGTCCGTGGCCTCGGCTACTCCTCCGTCACCGCGCAGCTCATGACCGTACCCCCCTGGGCCGTCGG TTACATCATCTCCATGCTGCTCGCCGACTCCCCTGACGGCTTCAACGCGCGCGGCCTGCACGTCGCCCTGGCAGG CTTGCTCGCAGGAACAGGCTTCCTCGCCGCCCGCCTCCTCCCAGTGACCGCGTACCTCGCCCGGTACGGTTGCCT GATTGTCGCTTCATGCGGTGTGTTCCCTAGCGCCGCGCCGCTGACCGCGTGGGTGATGTGCAACACGCACGCGGA CACTGGGGCTCGCGGCGGCTGTTGCGGGCGCCTTGTTTTTGTTCTATAG |