© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1063.t1 |
| Gene name | |
| Location | scaffold_003:742200..745099 |
| Strand | + |
| Gene length (bp) | 2899 |
| Transcript length (bp) | 2592 |
| Coding sequence length (bp) | 2592 |
| Protein length (aa) | 864 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00654 | Voltage_CLC | Voltage gated chloride channel | 3.5E-87 | 184 | 564 |
| PF00571 | CBS | CBS domain | 6.2E-06 | 596 | 653 |
| PF00571 | CBS | CBS domain | 2.0E-04 | 717 | 762 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006821 | chloride transport | Yes |
| GO:0005247 | voltage-gated chloride channel activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0008509 | anion transmembrane transporter activity | No |
| GO:0015108 | chloride transmembrane transporter activity | No |
| GO:0005253 | anion channel activity | No |
| GO:0005244 | voltage-gated ion channel activity | No |
| GO:0015267 | channel activity | No |
| GO:0005216 | ion channel activity | No |
| GO:0003674 | molecular_function | No |
| GO:0006820 | anion transport | No |
| GO:0022836 | gated channel activity | No |
| GO:0006810 | transport | No |
| GO:0005254 | chloride channel activity | No |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0015698 | inorganic anion transport | No |
| GO:0015103 | inorganic anion transmembrane transporter activity | No |
| GO:0022832 | voltage-gated channel activity | No |
| GO:0051179 | localization | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0022803 | passive transmembrane transporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0008308 | voltage-gated anion channel activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0006811 | ion transport | No |
| GO:0005215 | transporter activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 107 | 129 | 22 |
| 2 | 169 | 191 | 22 |
| 3 | 217 | 239 | 22 |
| 4 | 275 | 297 | 22 |
| 5 | 310 | 332 | 22 |
| 6 | 347 | 369 | 22 |
| 7 | 389 | 408 | 19 |
| 8 | 440 | 462 | 22 |
| 9 | 469 | 491 | 22 |
| 10 | 528 | 550 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1063.t1 MPVSPSSARPPPLSSERRNWRRLSGLSVVSPIHERPTPENGQPSAITEEISEIKRYEDFTTIDWVQDAVHEQARR RAKRRDGSGFWDQEGTFGWRRKVRESYDAGQAWLVITIVGAAIGLISAILNIITEWLSDVKLGHCTTAFYLNEQF CCWGAEGGCPEWRPWTSYWIVNYFIYIFYAVLFAFVAASLVKSFAPYAAGSGISEIKCIIAGFVMKGFLGAWTLL IKSIALPLAIASGLSVGKEGPSVHFAVCTGNVISRFFSKYKQNASKTREVLTATAAAGVAVAFGSPIGGVLFSLE EVASYFPLKTLWRSYFCALVATGVLAVMNPFRTGQLVMFQVQYDRTWHFFELIFFVLIGVFGGLYGAFVIKWNLR VQAFRKKYLSQHAIMESVVLAGITAILCYPNMFLKINMTEMMEILFRECEGGHDYNGLCEAKNRWSMVMSLAVAT ILRIFLVIISYGCKVPAGIFVPSMAIGASFGRFVGILVQALHEAYPKSQFFASCEPDIPCITPGTYAFLGAGAAL SGIMHLTISVTVIMFELTGALNYILPTMIVVGVTKAVSDCFGKGGIADRMIWSNGFPFLDNKEDHVFNVPVSQAM TSDPVSLPASDFPVREAEHLLSDNKYQGFPIVDDRTRKTLVGYIGRTELRYAINRAKAEGPLSPTAKCLFTKEAA EASVTRRASTASHLHVPETFDDIQTNTGADYVDFSRYADHTPLTVHPRLALETVMEIFKKMGPRVILVEHRGRLM GLVTVKDCLKYQFKVEAEEQALAATSPPQLALGGGGGRSGGDTLEERLWNLLQRIGSLLPWQRPPPQQQQQQQQR QQQQSRRRDTTAPEHHRDAETTANEADEEDAMLELEER* |
| Coding | >Ani_SJS100_1|g1063.t1 ATGCCTGTCTCACCCTCTTCGGCTCGTCCGCCTCCCCTCTCGTCTGAGCGTCGGAATTGGAGGAGGTTATCAGGC TTATCTGTCGTCTCACCGATCCACGAGCGCCCGACCCCGGAAAATGGTCAGCCCTCCGCGATCACCGAGGAGATC AGCGAAATTAAGCGCTACGAAGATTTTACAACCATCGACTGGGTGCAAGATGCGGTTCATGAACAGGCACGTCGG AGAGCCAAGCGACGAGATGGATCTGGGTTTTGGGACCAGGAAGGGACCTTTGGTTGGAGACGCAAAGTGCGCGAA TCCTACGATGCTGGTCAGGCGTGGCTGGTTATTACAATTGTGGGGGCGGCCATTGGGTTGATCTCAGCGATTCTG AACATCATCACAGAGTGGCTGTCTGACGTCAAGCTGGGGCATTGTACGACTGCGTTTTATCTCAATGAACAGTTT TGTTGTTGGGGTGCTGAAGGAGGGTGTCCGGAGTGGAGGCCTTGGACCTCTTACTGGATCGTGAACTACTTCATC TACATCTTTTACGCTGTACTATTTGCGTTCGTCGCCGCAAGCCTCGTCAAATCGTTCGCGCCGTATGCCGCAGGT TCCGGCATTTCCGAGATAAAGTGTATAATTGCGGGGTTTGTGATGAAGGGATTCTTGGGCGCATGGACATTGCTG ATCAAGTCGATCGCACTACCGCTGGCCATTGCATCTGGTCTGTCCGTGGGGAAAGAGGGTCCGAGTGTGCACTTC GCTGTGTGTACGGGGAACGTGATATCGCGGTTCTTCAGCAAATACAAGCAGAACGCATCCAAGACGAGGGAGGTC TTGACGGCAACAGCAGCGGCCGGAGTGGCAGTTGCATTTGGCAGTCCCATTGGTGGGGTGCTCTTTTCTCTCGAG GAAGTGGCATCGTACTTCCCCCTCAAGACTTTATGGCGCAGTTACTTTTGTGCCTTGGTTGCGACTGGTGTGCTG GCGGTTATGAATCCATTCCGGACAGGGCAACTAGTCATGTTCCAGGTGCAATATGACCGTACCTGGCACTTCTTC GAACTGATATTCTTCGTCTTAATTGGTGTCTTTGGTGGCTTGTACGGTGCCTTTGTGATCAAGTGGAACCTTCGG GTGCAAGCGTTCAGGAAGAAGTACCTGTCGCAGCATGCCATCATGGAATCAGTTGTCCTAGCCGGAATCACGGCC ATTCTATGCTACCCGAATATGTTCCTGAAGATCAACATGACGGAGATGATGGAGATCCTTTTCCGGGAATGCGAG GGAGGGCACGACTATAACGGCCTGTGCGAGGCTAAGAACCGCTGGTCTATGGTGATGTCGCTGGCCGTAGCTACC ATTCTTCGCATCTTCTTGGTCATCATCTCATATGGCTGCAAGGTCCCAGCTGGTATCTTCGTGCCGTCAATGGCA ATCGGGGCGTCCTTTGGCCGGTTCGTCGGTATCCTCGTGCAGGCGTTGCACGAAGCGTATCCGAAGTCTCAATTC TTTGCGTCCTGCGAGCCGGATATTCCATGCATTACACCAGGAACATATGCTTTCCTGGGGGCGGGCGCGGCTCTG AGTGGTATCATGCATTTGACGATCTCTGTGACGGTCATCATGTTCGAGTTGACGGGTGCTCTGAACTACATTCTT CCAACAATGATCGTCGTCGGCGTCACCAAAGCCGTCAGCGACTGCTTCGGCAAGGGCGGCATCGCCGACCGCATG ATCTGGTCCAACGGATTCCCATTCCTCGACAATAAAGAAGACCACGTCTTCAACGTGCCGGTCTCGCAAGCCATG ACATCGGACCCAGTCTCACTGCCCGCATCCGACTTTCCCGTCCGCGAAGCCGAGCACCTACTAAGCGACAACAAA TACCAAGGCTTCCCGATCGTTGACGACCGGACCCGGAAGACACTCGTCGGATACATCGGCCGCACGGAGCTGCGA TATGCAATCAACCGCGCCAAAGCCGAGGGACCGCTATCGCCGACAGCAAAATGCCTATTCACTAAAGAAGCAGCC GAGGCATCAGTAACACGCAGGGCATCGACAGCATCACATCTCCACGTGCCGGAGACCTTCGACGACATCCAGACG AACACAGGGGCCGACTACGTCGATTTTAGCCGGTACGCGGACCACACGCCGCTGACAGTACATCCTCGTCTCGCC CTGGAGACGGTAATGGAGATCTTCAAGAAGATGGGACCGCGCGTCATCCTGGTCGAGCATCGCGGTCGTCTGATG GGCCTGGTCACCGTCAAGGACTGCCTGAAGTACCAGTTCAAGGTTGAAGCCGAGGAACAGGCGCTGGCGGCGACT AGTCCGCCCCAACTAGCTCTGGGGGGAGGGGGCGGACGGAGTGGTGGTGACACGTTAGAAGAGCGGCTGTGGAAC CTCCTCCAGCGCATCGGGTCTTTACTGCCGTGGCAGAGGCCACCACCACAGCAGCAGCAGCAGCAACAACAACGA CAACAACAACAATCCAGACGACGAGACACCACAGCTCCAGAGCATCACAGAGATGCAGAGACCACAGCCAACGAA GCAGACGAGGAAGACGCAATGCTGGAGTTAGAAGAGCGCTAA |
| Transcript | >Ani_SJS100_1|g1063.t1 ATGCCTGTCTCACCCTCTTCGGCTCGTCCGCCTCCCCTCTCGTCTGAGCGTCGGAATTGGAGGAGGTTATCAGGC TTATCTGTCGTCTCACCGATCCACGAGCGCCCGACCCCGGAAAATGGTCAGCCCTCCGCGATCACCGAGGAGATC AGCGAAATTAAGCGCTACGAAGATTTTACAACCATCGACTGGGTGCAAGATGCGGTTCATGAACAGGCACGTCGG AGAGCCAAGCGACGAGATGGATCTGGGTTTTGGGACCAGGAAGGGACCTTTGGTTGGAGACGCAAAGTGCGCGAA TCCTACGATGCTGGTCAGGCGTGGCTGGTTATTACAATTGTGGGGGCGGCCATTGGGTTGATCTCAGCGATTCTG AACATCATCACAGAGTGGCTGTCTGACGTCAAGCTGGGGCATTGTACGACTGCGTTTTATCTCAATGAACAGTTT TGTTGTTGGGGTGCTGAAGGAGGGTGTCCGGAGTGGAGGCCTTGGACCTCTTACTGGATCGTGAACTACTTCATC TACATCTTTTACGCTGTACTATTTGCGTTCGTCGCCGCAAGCCTCGTCAAATCGTTCGCGCCGTATGCCGCAGGT TCCGGCATTTCCGAGATAAAGTGTATAATTGCGGGGTTTGTGATGAAGGGATTCTTGGGCGCATGGACATTGCTG ATCAAGTCGATCGCACTACCGCTGGCCATTGCATCTGGTCTGTCCGTGGGGAAAGAGGGTCCGAGTGTGCACTTC GCTGTGTGTACGGGGAACGTGATATCGCGGTTCTTCAGCAAATACAAGCAGAACGCATCCAAGACGAGGGAGGTC TTGACGGCAACAGCAGCGGCCGGAGTGGCAGTTGCATTTGGCAGTCCCATTGGTGGGGTGCTCTTTTCTCTCGAG GAAGTGGCATCGTACTTCCCCCTCAAGACTTTATGGCGCAGTTACTTTTGTGCCTTGGTTGCGACTGGTGTGCTG GCGGTTATGAATCCATTCCGGACAGGGCAACTAGTCATGTTCCAGGTGCAATATGACCGTACCTGGCACTTCTTC GAACTGATATTCTTCGTCTTAATTGGTGTCTTTGGTGGCTTGTACGGTGCCTTTGTGATCAAGTGGAACCTTCGG GTGCAAGCGTTCAGGAAGAAGTACCTGTCGCAGCATGCCATCATGGAATCAGTTGTCCTAGCCGGAATCACGGCC ATTCTATGCTACCCGAATATGTTCCTGAAGATCAACATGACGGAGATGATGGAGATCCTTTTCCGGGAATGCGAG GGAGGGCACGACTATAACGGCCTGTGCGAGGCTAAGAACCGCTGGTCTATGGTGATGTCGCTGGCCGTAGCTACC ATTCTTCGCATCTTCTTGGTCATCATCTCATATGGCTGCAAGGTCCCAGCTGGTATCTTCGTGCCGTCAATGGCA ATCGGGGCGTCCTTTGGCCGGTTCGTCGGTATCCTCGTGCAGGCGTTGCACGAAGCGTATCCGAAGTCTCAATTC TTTGCGTCCTGCGAGCCGGATATTCCATGCATTACACCAGGAACATATGCTTTCCTGGGGGCGGGCGCGGCTCTG AGTGGTATCATGCATTTGACGATCTCTGTGACGGTCATCATGTTCGAGTTGACGGGTGCTCTGAACTACATTCTT CCAACAATGATCGTCGTCGGCGTCACCAAAGCCGTCAGCGACTGCTTCGGCAAGGGCGGCATCGCCGACCGCATG ATCTGGTCCAACGGATTCCCATTCCTCGACAATAAAGAAGACCACGTCTTCAACGTGCCGGTCTCGCAAGCCATG ACATCGGACCCAGTCTCACTGCCCGCATCCGACTTTCCCGTCCGCGAAGCCGAGCACCTACTAAGCGACAACAAA TACCAAGGCTTCCCGATCGTTGACGACCGGACCCGGAAGACACTCGTCGGATACATCGGCCGCACGGAGCTGCGA TATGCAATCAACCGCGCCAAAGCCGAGGGACCGCTATCGCCGACAGCAAAATGCCTATTCACTAAAGAAGCAGCC GAGGCATCAGTAACACGCAGGGCATCGACAGCATCACATCTCCACGTGCCGGAGACCTTCGACGACATCCAGACG AACACAGGGGCCGACTACGTCGATTTTAGCCGGTACGCGGACCACACGCCGCTGACAGTACATCCTCGTCTCGCC CTGGAGACGGTAATGGAGATCTTCAAGAAGATGGGACCGCGCGTCATCCTGGTCGAGCATCGCGGTCGTCTGATG GGCCTGGTCACCGTCAAGGACTGCCTGAAGTACCAGTTCAAGGTTGAAGCCGAGGAACAGGCGCTGGCGGCGACT AGTCCGCCCCAACTAGCTCTGGGGGGAGGGGGCGGACGGAGTGGTGGTGACACGTTAGAAGAGCGGCTGTGGAAC CTCCTCCAGCGCATCGGGTCTTTACTGCCGTGGCAGAGGCCACCACCACAGCAGCAGCAGCAGCAACAACAACGA CAACAACAACAATCCAGACGACGAGACACCACAGCTCCAGAGCATCACAGAGATGCAGAGACCACAGCCAACGAA GCAGACGAGGAAGACGCAATGCTGGAGTTAGAAGAGCGCTAA |
| Gene | >Ani_SJS100_1|g1063.t1 ATGCCTGTCTCACCCTCTTCGGCTCGTCCGCCTCCCCTCTCGTCTGAGCGTCGGAATTGGAGGAGGTTATCAGGC TTATCTGTCGTCTCACCGATCCACGAGCGCCCGACCCCGGAAAATGGTCAGCCCTCCGCGATCACCGAGGAGATC AGCGAAATTAAGCGCTACGAAGATTTTACAACCATCGACTGGGTGCAAGATGCGGTTCATGAACAGGCACGTCGG AGAGCCAAGCGACGAGATGGATCTGGGTTTTGGGACCAGGAAGGGACCTTTGGTTGGAGACGCAAAGTGCGCGAA TCCTACGATGCTGGTCAGGCGTGGCTGGTTATTACAATTGTGGGGGCGGCCATTGGGTTGATCTCAGCGATTCTG AACATCATCACAGAGTGGCTGTCTGACGTCAAGCTGGGGCATTGTACGACTGCGTTTTATCTCAATGAACAGTTT TGTTGTTGGGGTGCTGAAGGAGGTATGTCGGACTGGTGGTGCGATCGCCCCTCGCTGTCTGAGCTGATGGTTCTT TGTTTTCAGGGTGTCCGGAGTGGAGGCCTTGGACCTCTTACTGGATCGTGAACTACTTCATCTACATCTTTTACG CTGTATGGCTGTCCACTCTGCTCGTTCTGAATGAATGGAGCTGACCTCGATAGGTACTATTTGCGTTCGTCGCCG CAAGCCTCGTCAAATCGTTCGCGCCGTATGCCGCAGGTTCCGGCATTTCCGAGATAAAGTGTATAATTGCGGGGT TTGTGATGAAGGGATTCTTGGGCGCATGGACATTGCTGATCAAGTCGATCGCACTACCGCTGGCCATTGCATCTG GTCTGTCCGTGGGGAAAGAGGGTCCGAGTGTGCACTTCGCTGTGTGTACGGGGAACGTGATATCGCGGTTCTTCA GCAAATACAAGCAGAACGCATCCAAGACGAGGGAGGTCTTGACGGCAACAGCAGCGGCCGGAGTGGCAGTTGCAT TTGGCAGTCCCATTGGTGGGGTGCTCTTTTCTCTCGAGGTATGGACAGCAGGGCCGATATGAAAGCTCTCACTGA TTAGCTGGCAGGAAGTGGCATCGTACTTCCCCCTCAAGACTTTATGGCGCAGTTACTTTTGTGCCTTGGTTGCGA CTGGTGTGCTGGCGGTATGTCTACCAAATGAATGCCTTGACTGGCTGTCGCTGACACAATGCAGGTTATGAATCC ATTCCGGACAGGGCAACTAGTCATGTTCCAGGTGCAATATGACCGTACCTGGCACTTCTTCGAACTGATATTCTT CGTCTTAATTGGTGTCTTTGGTGGCTTGTACGGTGCCTTTGTGATCAAGTGGAACCTTCGGGTGCAAGCGTTCAG GAAGAAGTACCTGTCGCAGCATGCCATCATGGAATCAGTTGTCCTAGCCGGAATCACGGCCATTCTATGCTACCC GAATATGTTCCTGAAGATCAACATGACGGAGATGATGGAGATCCTTTTCCGGGAATGCGAGGGAGGGCACGACTA TAACGGCCTGTGCGAGTAAGTGGCATCATTCGGTTGGCGCAACACGTACTCACCTATTATAGGGCTAAGAACCGC TGGTCTATGGTGATGTCGCTGGCCGTAGCTACCATTCTTCGCATCTTCTTGGTCATCATCTCATATGGCTGCAAG GTCCCAGCTGGTATCTTCGTGCCGTCAATGGCAATCGGGGCGTCCTTTGGCCGGTTCGTCGGTATCCTCGTGCAG GCGTTGCACGAAGCGTATCCGAAGTCTCAATTCTTTGCGTCCTGCGAGCCGGATATTCCATGCATTACACCAGGA ACATATGCTTTCCTGGGGGCGGGCGCGGCTCTGAGTGGTATCATGCATTTGACGATCTCTGTGACGGTCATCATG TTCGAGTTGACGGGTGCTCTGAACTACATTCTTCCAACAATGGTGCGTTTATTGCAAAACTATCCCCGTACTACC ACTAACTCATAACTAGATCGTCGTCGGCGTCACCAAAGCCGTCAGCGACTGCTTCGGCAAGGGCGGCATCGCCGA CCGCATGATCTGGTCCAACGGATTCCCATTCCTCGACAATAAAGAAGACCACGTCTTCAACGTGCCGGTCTCGCA AGCCATGACATCGGACCCAGTCTCACTGCCCGCATCCGACTTTCCCGTCCGCGAAGCCGAGCACCTACTAAGCGA CAACAAATACCAAGGCTTCCCGATCGTTGACGACCGGACCCGGAAGACACTCGTCGGATACATCGGCCGCACGGA GCTGCGATATGCAATCAACCGCGCCAAAGCCGAGGGACCGCTATCGCCGACAGCAAAATGCCTATTCACTAAAGA AGCAGCCGAGGCATCAGTAACACGCAGGGCATCGACAGCATCACATCTCCACGTGCCGGAGACCTTCGACGACAT CCAGACGAACACAGGGGCCGACTACGTCGATTTTAGCCGGTACGCGGACCACACGCCGCTGACAGTACATCCTCG TCTCGCCCTGGAGACGGTAATGGAGATCTTCAAGAAGATGGGACCGCGCGTCATCCTGGTCGAGCATCGCGGTCG TCTGATGGGCCTGGTCACCGTCAAGGACTGCCTGAAGTACCAGTTCAAGGTTGAAGCCGAGGAACAGGCGCTGGC GGCGACTAGTCCGCCCCAACTAGCTCTGGGGGGAGGGGGCGGACGGAGTGGTGGTGACACGTTAGAAGAGCGGCT GTGGAACCTCCTCCAGCGCATCGGGTCTTTACTGCCGTGGCAGAGGCCACCACCACAGCAGCAGCAGCAGCAACA ACAACGACAACAACAACAATCCAGACGACGAGACACCACAGCTCCAGAGCATCACAGAGATGCAGAGACCACAGC CAACGAAGCAGACGAGGAAGACGCAATGCTGGAGTTAGAAGAGCGCTAA |