Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1062.t1
Gene name
Locationscaffold_003:740885..741632
Strand-
Gene length (bp)747
Transcript length (bp)561
Coding sequence length (bp)561
Protein length (aa) 187

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00808 CBFD_NFYB_HMF Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1.5E-12 23 87

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Histone-like TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1062.t1
MPPKDKAAAEASSSREITGQSALPISRIKKIIQLDDDIVQCSSNATFVIAMATELFIQYLTEQGHNVVKSERKPR
KLIQYKDLATAVSRIDNLEFLSDVIPKTTTYKQFKEKRAKEKEPGPEKGQRTLNGNLPAAVEDKEELEEQQSLQP
VDDKPSRGSRPPTVTMMVDRTVDTSAGDQDVEMTDQ*
Coding >Ani_SJS100_1|g1062.t1
ATGCCGCCCAAGGACAAAGCTGCGGCGGAAGCATCGTCTTCCCGAGAGATCACAGGCCAGAGCGCACTTCCAATC
TCGCGGATCAAGAAGATTATTCAATTAGACGACGATATCGTACAATGTTCGAGCAACGCTACGTTTGTGATCGCC
ATGGCCACGGAGCTATTCATTCAATACCTTACCGAACAAGGACACAACGTTGTTAAATCCGAACGAAAGCCGCGC
AAGCTTATCCAATACAAGGACCTGGCTACGGCCGTATCACGCATCGACAACCTCGAATTTCTTTCCGACGTGATC
CCCAAAACCACGACCTATAAGCAGTTCAAGGAGAAACGGGCGAAGGAGAAGGAACCCGGACCCGAGAAGGGACAG
CGCACATTAAACGGCAATTTACCTGCAGCTGTCGAAGATAAAGAGGAACTTGAGGAACAACAAAGTCTACAGCCA
GTAGATGACAAACCTTCGAGGGGGTCTCGACCGCCAACGGTGACAATGATGGTGGATCGAACGGTTGATACATCT
GCTGGAGATCAGGATGTTGAGATGACGGACCAGTGA
Transcript >Ani_SJS100_1|g1062.t1
ATGCCGCCCAAGGACAAAGCTGCGGCGGAAGCATCGTCTTCCCGAGAGATCACAGGCCAGAGCGCACTTCCAATC
TCGCGGATCAAGAAGATTATTCAATTAGACGACGATATCGTACAATGTTCGAGCAACGCTACGTTTGTGATCGCC
ATGGCCACGGAGCTATTCATTCAATACCTTACCGAACAAGGACACAACGTTGTTAAATCCGAACGAAAGCCGCGC
AAGCTTATCCAATACAAGGACCTGGCTACGGCCGTATCACGCATCGACAACCTCGAATTTCTTTCCGACGTGATC
CCCAAAACCACGACCTATAAGCAGTTCAAGGAGAAACGGGCGAAGGAGAAGGAACCCGGACCCGAGAAGGGACAG
CGCACATTAAACGGCAATTTACCTGCAGCTGTCGAAGATAAAGAGGAACTTGAGGAACAACAAAGTCTACAGCCA
GTAGATGACAAACCTTCGAGGGGGTCTCGACCGCCAACGGTGACAATGATGGTGGATCGAACGGTTGATACATCT
GCTGGAGATCAGGATGTTGAGATGACGGACCAGTGA
Gene >Ani_SJS100_1|g1062.t1
ATGCCGCCCAAGGACAAAGCTGCGGCGGAAGCATCGTCTTCCCGAGAGATCACAGGCCAGAGCGCACTTCCAAGT
ATGTGGGAAGTTTTCTGGCTATAAGTGCAAGGCTAACATGAGCTGAAGTCTCGCGGATCAAGAAGATTATTCAAT
TAGACGACGATATCGTACAATGTTCGAGCAACGCTACGTTTGTGATCGCCATGGCCACGGTTCGTGACTACGATA
CTTCCTCCCCTCTTCAGTCAATATCGAGGCTATCAACACTCACATCTCTTTCACGAAATTAGGAGCTATTCATTC
AATACCTTACCGAACAAGGACACAACGTTGTTAAATCCGAACGAAAGCCGCGCAAGCTTATCCAATACAAGGACC
TGGGTTAGTGACCACTGGGCAAAGGGATGATAATATGAGTTACTGACGGATGGATATCCAGCTACGGCCGTATCA
CGCATCGACAACCTCGAATTTCTTTCCGACGTGATCCCCAAAACCACGACCTATAAGCAGTTCAAGGAGAAACGG
GCGAAGGAGAAGGAACCCGGACCCGAGAAGGGACAGCGCACATTAAACGGCAATTTACCTGCAGCTGTCGAAGAT
AAAGAGGAACTTGAGGAACAACAAAGTCTACAGCCAGTAGATGACAAACCTTCGAGGGGGTCTCGACCGCCAACG
GTGACAATGATGGTGGATCGAACGGTTGATACATCTGCTGGAGATCAGGATGTTGAGATGACGGACCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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