Protein ID | Ani_SJS100_1|g1060.t1 |
Gene name | |
Location | scaffold_003:736985..738550 |
Strand | + |
Gene length (bp) | 1565 |
Transcript length (bp) | 1494 |
Coding sequence length (bp) | 1494 |
Protein length (aa) | 498 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05546 | She9_MDM33 | She9 / Mdm33 family | 4.1E-88 | 152 | 345 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 299 | 321 | 22 |
2 | 472 | 494 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g1060.t1 MQSMPLLLRQSFKSTLNLTRTTRPVQRRPLLPAVGPNSLYPAPRNFSICLQCQFRTQSSLYSSDSLKDGKPAEQP KEDASPVIALPAGNANLEADAGSQQQAPPAAAEAGESTQSQQQQQQQQQEEKSEANGKGWGDGGLPSYIEQRRSQ FTKRFSDVMDNLQSNIFVAGQRLNDLTGYSAIEMLKKEIHRQEERLRTARLQVRTAKDAYAAAINNRSTSQREVN ELLQRKHAWSPTDLERFTHLYRNDHTNEVAEHEAQEALSQAEHEAEEAAAQLSKSILSRYHEEQVWSDKIRQMST WGTWGLMGVNVLLFLIFQIAVEPWRRKRLVKGFEEKVIEAIEKEKALDRIQIVTAQNQMAQESSTTSTASTATPE TAETAETAEPSASPADEPIADTDAIVTIESTEPEVFSSDPADAEPPANTIVSKPTPDNIREYIKFQLARVSPLLE SLRQYLHDLFSDRQVVLTQRDLSTVALQSAAAGAAVIGMLSMIIRQR* |
Coding | >Ani_SJS100_1|g1060.t1 ATGCAGTCTATGCCATTGCTGCTCAGGCAGTCCTTCAAATCAACTCTCAACCTCACCCGAACAACCCGCCCAGTC CAACGACGACCGCTCCTGCCCGCCGTTGGACCGAACTCTCTTTACCCTGCACCGCGGAACTTCTCCATCTGCCTG CAATGTCAATTCCGAACCCAGTCCTCGCTTTACTCGTCTGATTCCCTCAAAGACGGGAAGCCTGCTGAGCAGCCG AAAGAAGATGCAAGCCCAGTCATAGCTCTTCCCGCAGGGAACGCAAATCTAGAAGCCGATGCGGGGAGTCAGCAA CAGGCTCCTCCCGCTGCTGCGGAGGCGGGCGAAAGTACACAAAGCCAGCAGCAGCAGCAGCAGCAGCAGCAAGAA GAGAAGAGCGAGGCCAATGGAAAGGGATGGGGAGATGGAGGGCTTCCATCCTACATAGAGCAACGCAGGTCACAA TTCACAAAGCGGTTCAGTGATGTGATGGACAACCTGCAGTCCAACATTTTCGTGGCAGGACAGCGATTGAATGAT CTTACGGGCTATTCGGCGATCGAAATGTTGAAGAAGGAGATTCACAGACAAGAGGAGCGACTCCGCACCGCCCGC CTCCAAGTCCGCACAGCGAAAGATGCCTACGCAGCTGCCATCAACAACCGATCGACCTCCCAGCGCGAAGTCAAT GAGCTTCTCCAGCGCAAACATGCCTGGTCCCCCACTGACCTGGAACGATTCACCCACCTCTACCGCAACGACCAC ACCAACGAAGTAGCCGAGCACGAAGCACAGGAGGCTTTGAGCCAGGCCGAACACGAGGCCGAAGAGGCCGCTGCA CAATTGAGCAAGAGCATTTTGTCCCGGTATCACGAGGAACAAGTCTGGTCGGACAAGATCCGCCAAATGAGTACT TGGGGTACCTGGGGCCTGATGGGCGTCAACGTTCTTCTGTTCCTGATATTTCAAATCGCCGTGGAACCCTGGCGT CGCAAGAGACTCGTCAAGGGCTTCGAAGAGAAGGTCATCGAAGCCATTGAGAAGGAAAAGGCGCTTGATCGCATT CAGATCGTGACTGCTCAGAACCAGATGGCGCAGGAATCGTCTACTACATCTACCGCCTCTACAGCGACTCCTGAG ACCGCTGAGACCGCTGAGACCGCAGAACCATCTGCCTCTCCCGCAGATGAGCCAATCGCTGATACCGATGCAATC GTCACGATTGAGAGCACCGAACCAGAGGTATTTAGTTCGGATCCAGCTGATGCCGAACCGCCAGCCAATACCATA GTCAGCAAACCCACCCCTGACAATATCCGGGAGTATATCAAATTCCAGCTCGCGCGCGTCTCTCCCCTCTTAGAA TCCTTGCGCCAATATCTCCACGATCTCTTCAGTGACCGCCAAGTCGTGCTCACGCAACGAGACCTCTCTACTGTT GCTCTGCAAAGCGCTGCTGCTGGTGCGGCGGTGATCGGCATGTTGTCGATGATTATTCGGCAACGGTGA |
Transcript | >Ani_SJS100_1|g1060.t1 ATGCAGTCTATGCCATTGCTGCTCAGGCAGTCCTTCAAATCAACTCTCAACCTCACCCGAACAACCCGCCCAGTC CAACGACGACCGCTCCTGCCCGCCGTTGGACCGAACTCTCTTTACCCTGCACCGCGGAACTTCTCCATCTGCCTG CAATGTCAATTCCGAACCCAGTCCTCGCTTTACTCGTCTGATTCCCTCAAAGACGGGAAGCCTGCTGAGCAGCCG AAAGAAGATGCAAGCCCAGTCATAGCTCTTCCCGCAGGGAACGCAAATCTAGAAGCCGATGCGGGGAGTCAGCAA CAGGCTCCTCCCGCTGCTGCGGAGGCGGGCGAAAGTACACAAAGCCAGCAGCAGCAGCAGCAGCAGCAGCAAGAA GAGAAGAGCGAGGCCAATGGAAAGGGATGGGGAGATGGAGGGCTTCCATCCTACATAGAGCAACGCAGGTCACAA TTCACAAAGCGGTTCAGTGATGTGATGGACAACCTGCAGTCCAACATTTTCGTGGCAGGACAGCGATTGAATGAT CTTACGGGCTATTCGGCGATCGAAATGTTGAAGAAGGAGATTCACAGACAAGAGGAGCGACTCCGCACCGCCCGC CTCCAAGTCCGCACAGCGAAAGATGCCTACGCAGCTGCCATCAACAACCGATCGACCTCCCAGCGCGAAGTCAAT GAGCTTCTCCAGCGCAAACATGCCTGGTCCCCCACTGACCTGGAACGATTCACCCACCTCTACCGCAACGACCAC ACCAACGAAGTAGCCGAGCACGAAGCACAGGAGGCTTTGAGCCAGGCCGAACACGAGGCCGAAGAGGCCGCTGCA CAATTGAGCAAGAGCATTTTGTCCCGGTATCACGAGGAACAAGTCTGGTCGGACAAGATCCGCCAAATGAGTACT TGGGGTACCTGGGGCCTGATGGGCGTCAACGTTCTTCTGTTCCTGATATTTCAAATCGCCGTGGAACCCTGGCGT CGCAAGAGACTCGTCAAGGGCTTCGAAGAGAAGGTCATCGAAGCCATTGAGAAGGAAAAGGCGCTTGATCGCATT CAGATCGTGACTGCTCAGAACCAGATGGCGCAGGAATCGTCTACTACATCTACCGCCTCTACAGCGACTCCTGAG ACCGCTGAGACCGCTGAGACCGCAGAACCATCTGCCTCTCCCGCAGATGAGCCAATCGCTGATACCGATGCAATC GTCACGATTGAGAGCACCGAACCAGAGGTATTTAGTTCGGATCCAGCTGATGCCGAACCGCCAGCCAATACCATA GTCAGCAAACCCACCCCTGACAATATCCGGGAGTATATCAAATTCCAGCTCGCGCGCGTCTCTCCCCTCTTAGAA TCCTTGCGCCAATATCTCCACGATCTCTTCAGTGACCGCCAAGTCGTGCTCACGCAACGAGACCTCTCTACTGTT GCTCTGCAAAGCGCTGCTGCTGGTGCGGCGGTGATCGGCATGTTGTCGATGATTATTCGGCAACGGTGA |
Gene | >Ani_SJS100_1|g1060.t1 ATGCAGTCTATGCCATTGCTGCTCAGGCAGTCCTTCAAATCAACTCTCAACCTCACCCGAACAACCCGCCCAGTC CAACGACGACCGCTCCTGCCCGCCGTTGGACCGAACTCTCTTTACCCTGCACCGCGGAACTTCTCCATCTGCCTG CAATGTCAATTCCGAACCCAGTCCTCGCTTTACTCGTCTGATTCCCTCAAAGACGGGAAGCCTGCTGAGCAGCCG AAAGAAGATGCAAGCCCAGTCATAGCTCTTCCCGCAGGGAACGCAAATCTAGAAGCCGATGCGGGGAGTCAGCAA CAGGCTCCTCCCGCTGCTGCGGAGGCGGGCGAAAGTACACAAAGCCAGCAGCAGCAGCAGCAGCAGCAGCAAGAA GAGAAGAGCGAGGCCAATGGAAAGGGATGGGGAGATGGAGGGCTTCCATCCTACATAGAGCAACGCAGGTCACAA TTCACAAAGCGGTTCAGTGATGTGATGGACAACCTGCAGTCCAACATTTTCGTGGCAGGACAGCGATTGAATGAT CTTACGGGCTATTCGGCGATCGAAATGTTGAAGAAGGAGATTCACAGACAAGGTATGTGGCACCCATATTCCATA ACTTAATCATTAGAACTATTGTTTCTAACCTTTGACATGGGTGAATAGAGGAGCGACTCCGCACCGCCCGCCTCC AAGTCCGCACAGCGAAAGATGCCTACGCAGCTGCCATCAACAACCGATCGACCTCCCAGCGCGAAGTCAATGAGC TTCTCCAGCGCAAACATGCCTGGTCCCCCACTGACCTGGAACGATTCACCCACCTCTACCGCAACGACCACACCA ACGAAGTAGCCGAGCACGAAGCACAGGAGGCTTTGAGCCAGGCCGAACACGAGGCCGAAGAGGCCGCTGCACAAT TGAGCAAGAGCATTTTGTCCCGGTATCACGAGGAACAAGTCTGGTCGGACAAGATCCGCCAAATGAGTACTTGGG GTACCTGGGGCCTGATGGGCGTCAACGTTCTTCTGTTCCTGATATTTCAAATCGCCGTGGAACCCTGGCGTCGCA AGAGACTCGTCAAGGGCTTCGAAGAGAAGGTCATCGAAGCCATTGAGAAGGAAAAGGCGCTTGATCGCATTCAGA TCGTGACTGCTCAGAACCAGATGGCGCAGGAATCGTCTACTACATCTACCGCCTCTACAGCGACTCCTGAGACCG CTGAGACCGCTGAGACCGCAGAACCATCTGCCTCTCCCGCAGATGAGCCAATCGCTGATACCGATGCAATCGTCA CGATTGAGAGCACCGAACCAGAGGTATTTAGTTCGGATCCAGCTGATGCCGAACCGCCAGCCAATACCATAGTCA GCAAACCCACCCCTGACAATATCCGGGAGTATATCAAATTCCAGCTCGCGCGCGTCTCTCCCCTCTTAGAATCCT TGCGCCAATATCTCCACGATCTCTTCAGTGACCGCCAAGTCGTGCTCACGCAACGAGACCTCTCTACTGTTGCTC TGCAAAGCGCTGCTGCTGGTGCGGCGGTGATCGGCATGTTGTCGATGATTATTCGGCAACGGTGA |