© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10597.t1 |
| Gene name | |
| Location | scaffold_123:44586..46492 |
| Strand | + |
| Gene length (bp) | 1906 |
| Transcript length (bp) | 1419 |
| Coding sequence length (bp) | 1419 |
| Protein length (aa) | 473 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00955 | HCO3_cotransp | HCO3- transporter family | 2.0E-39 | 36 | 206 |
| PF00955 | HCO3_cotransp | HCO3- transporter family | 1.0E-25 | 238 | 452 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0006820 | anion transport | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0006811 | ion transport | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 64 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 66 | 88 | 22 |
| 2 | 108 | 130 | 22 |
| 3 | 143 | 165 | 22 |
| 4 | 175 | 194 | 19 |
| 5 | 211 | 228 | 17 |
| 6 | 263 | 280 | 17 |
| 7 | 301 | 323 | 22 |
| 8 | 392 | 414 | 22 |
| 9 | 447 | 469 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10597.t1 MSRTSFHDMEPLERKKTEVTYTYEGVRGWKGVRFLRPFRGMYHDVRRRLPYYWSDIKDAWNYRTIASIVRMYFVN ILPAIAYTMDMYRRTGEFYGINEGLFSSALAAMVFSILGAQPLTVVGITGLISLFNYTIYDIVNIYNPSIYPNFM CWTAIWAAIFHWIVAVCNLCDYMRYVTVFSSEAFGMYVGIIYCIKGLEELINEFATQGRDAGYLAYTLFWVGFAH FPGNLKSTHIGFLPISRAFYPTQDRGWLLHFWDLEAKWIFTALPFGFLTMLLFYYDHNISSLTAQARHFPLKKPS GFHWDFFLLGCTTFIAGIIGIPMPNGLVPQAPVHTDSLTVYETTLRVIPTEEGEGAEIRRPIVNAKAVIEQRISH FVMGLAIIGTMTGPLLIMLHTMPTAVFAGVFFTVGWGSIESDGMVQKTVFLMRENRFVQRDEPLLTVRKRKILLF IVLQGIGVTATVAISQTIAAIG* |
| Coding | >Ani_SJS100_1|g10597.t1 ATGTCGCGCACATCGTTTCATGACATGGAGCCCCTGGAGAGGAAGAAAACGGAAGTGACGTACACCTACGAAGGC GTGCGCGGATGGAAAGGCGTGCGCTTCCTACGACCTTTCCGCGGAATGTATCATGATGTGCGAAGAAGGCTACCC TACTACTGGAGTGATATCAAAGATGCTTGGAACTATCGCACTATCGCCAGTATTGTGCGGATGTATTTCGTCAAC ATCCTGCCCGCTATCGCCTATACGATGGACATGTACCGTCGCACGGGAGAGTTTTATGGCATCAATGAGGGCCTC TTCTCTTCGGCTCTGGCGGCCATGGTGTTCAGCATCTTGGGAGCACAACCGCTGACTGTCGTTGGTATTACGGGT CTGATCTCTCTTTTCAATTACACAATCTATGATATTGTAAACATTTACAATCCGTCCATATATCCCAACTTCATG TGTTGGACGGCCATCTGGGCGGCTATTTTCCACTGGATAGTGGCCGTGTGTAATCTGTGTGATTACATGCGGTAT GTAACGGTTTTCTCTAGCGAAGCCTTCGGCATGTATGTGGGCATTATTTATTGCATCAAGGGATTGGAAGAGTTG ATCAACGAGTTCGCCACCCAAGGTCGCGATGCAGGCTACTTGGCCTACACGCTCTTCTGGGTAGGTTTCGCGCAT TTCCCAGGAAACCTGAAGTCAACTCATATTGGGTTTCTGCCGATCTCGCGTGCCTTCTATCCTACCCAAGACCGA GGCTGGCTCCTTCATTTCTGGGATCTTGAGGCCAAATGGATATTCACTGCCTTGCCGTTTGGGTTTTTGACCATG CTCCTGTTCTACTACGACCACAATATCAGCAGTCTGACCGCTCAGGCGCGCCACTTCCCGCTGAAGAAGCCCTCC GGGTTTCACTGGGACTTCTTTCTATTGGGTTGCACCACCTTCATTGCAGGCATCATAGGAATTCCTATGCCAAAT GGTCTTGTTCCACAGGCTCCAGTCCACACGGACTCCCTAACGGTCTACGAGACGACCCTCCGGGTGATTCCAACC GAGGAAGGGGAAGGTGCCGAGATTCGTCGACCCATCGTCAATGCGAAAGCGGTTATTGAGCAGCGTATCTCCCAC TTTGTCATGGGGCTGGCTATTATTGGTACAATGACCGGCCCCTTACTGATTATGCTACATACAATGCCCACTGCT GTCTTCGCAGGTGTTTTCTTCACTGTTGGCTGGGGCTCCATAGAATCGGATGGAATGGTGCAAAAAACCGTCTTT CTCATGCGTGAGAACCGGTTCGTTCAGCGAGACGAGCCTCTACTAACGGTCCGGAAGCGGAAGATCTTGCTCTTT ATCGTACTTCAAGGGATCGGTGTTACTGCAACCGTGGCTATCTCCCAGACTATCGCTGCTATCGGTTAG |
| Transcript | >Ani_SJS100_1|g10597.t1 ATGTCGCGCACATCGTTTCATGACATGGAGCCCCTGGAGAGGAAGAAAACGGAAGTGACGTACACCTACGAAGGC GTGCGCGGATGGAAAGGCGTGCGCTTCCTACGACCTTTCCGCGGAATGTATCATGATGTGCGAAGAAGGCTACCC TACTACTGGAGTGATATCAAAGATGCTTGGAACTATCGCACTATCGCCAGTATTGTGCGGATGTATTTCGTCAAC ATCCTGCCCGCTATCGCCTATACGATGGACATGTACCGTCGCACGGGAGAGTTTTATGGCATCAATGAGGGCCTC TTCTCTTCGGCTCTGGCGGCCATGGTGTTCAGCATCTTGGGAGCACAACCGCTGACTGTCGTTGGTATTACGGGT CTGATCTCTCTTTTCAATTACACAATCTATGATATTGTAAACATTTACAATCCGTCCATATATCCCAACTTCATG TGTTGGACGGCCATCTGGGCGGCTATTTTCCACTGGATAGTGGCCGTGTGTAATCTGTGTGATTACATGCGGTAT GTAACGGTTTTCTCTAGCGAAGCCTTCGGCATGTATGTGGGCATTATTTATTGCATCAAGGGATTGGAAGAGTTG ATCAACGAGTTCGCCACCCAAGGTCGCGATGCAGGCTACTTGGCCTACACGCTCTTCTGGGTAGGTTTCGCGCAT TTCCCAGGAAACCTGAAGTCAACTCATATTGGGTTTCTGCCGATCTCGCGTGCCTTCTATCCTACCCAAGACCGA GGCTGGCTCCTTCATTTCTGGGATCTTGAGGCCAAATGGATATTCACTGCCTTGCCGTTTGGGTTTTTGACCATG CTCCTGTTCTACTACGACCACAATATCAGCAGTCTGACCGCTCAGGCGCGCCACTTCCCGCTGAAGAAGCCCTCC GGGTTTCACTGGGACTTCTTTCTATTGGGTTGCACCACCTTCATTGCAGGCATCATAGGAATTCCTATGCCAAAT GGTCTTGTTCCACAGGCTCCAGTCCACACGGACTCCCTAACGGTCTACGAGACGACCCTCCGGGTGATTCCAACC GAGGAAGGGGAAGGTGCCGAGATTCGTCGACCCATCGTCAATGCGAAAGCGGTTATTGAGCAGCGTATCTCCCAC TTTGTCATGGGGCTGGCTATTATTGGTACAATGACCGGCCCCTTACTGATTATGCTACATACAATGCCCACTGCT GTCTTCGCAGGTGTTTTCTTCACTGTTGGCTGGGGCTCCATAGAATCGGATGGAATGGTGCAAAAAACCGTCTTT CTCATGCGTGAGAACCGGTTCGTTCAGCGAGACGAGCCTCTACTAACGGTCCGGAAGCGGAAGATCTTGCTCTTT ATCGTACTTCAAGGGATCGGTGTTACTGCAACCGTGGCTATCTCCCAGACTATCGCTGCTATCGGTTAG |
| Gene | >Ani_SJS100_1|g10597.t1 ATGTCGCGCACATCGTTTCATGACATGGAGCCCCTGGAGAGGAAGAAAACGGAAGTGACGTACACCTACGAAGGC GTGCGCGGATGGAAAGGCGTGCGCTTCCTACGACCTTTCCGCGGAATGTATCATGATGTGCGAAGAAGGCTACCC TACTACTGGAGTGATATCAAAGATGCTTGGAACTATCGCACTATCGCCAGTATTGTGCGGATGTATTTCGTCAAG TATGCCATCCACACCACTCCTTGATGAAGGCGAACCGGATCGGTGCTGGCTTACTAACTGTGCGCCAGCATCCTG CCCGCTATCGCCTATACGATGGACATGTACCGTCGCACGGGAGAGTTTTATGGCATCAATGAGGGCCTCTTCTCT TCGGCTCTGGCGGCCATGGTGTTCAGCATCTTGGGAGCACAACCGCTGACTGTCGTTGGTATTACGGGTCTGATC TCTCTTTTCAATTACACAATCTATGATATTGTAAACATTTACAATCCGTCCATATATCCCAACTTCATGTGTTGG ACGGCCATCTGGGCGGCTATTTTCCACTGGATAGTGGCCGTGTGTAATCTGTGTGATTACATGCGGTATGTAACG GTTTTCTCTAGCGAAGCCTTCGGCATGTATGTGGGCATTATTTATTGCAGTAAGTTCCCACTCCTCGTGTTTCGC CCCACATTCTAACCCGCATCACAGTCAAGGGATTGGAAGAGTTGATCAACGAGTTCGCCACCCAAGGTCGCGATG CAGGCTACTTGGCCTGTATGATTGCCATCCTGTATTTCTTGACGATCTATGCGCTTGAGAAATTAGGCTCCAGTG CCATTTAGAAGCCTTCCATCCGGGGCTTGCTAGCTGATTACGTATATCCGGTAAGTTGGCCCCTACACTGTCACA CGGATGGCGCCTTCTGTTCTCTCTCCCATTGTTACCTGTCATCGCAGCCACATTTTCGGTTTGAAGCCAGGTCGG CTAATTGATGCAGCTAGACACGCTCTTCTGGGTAGGTTTCGCGCATTTCCCAGGAAACCTGAAGTCAACTCATAT TGGGTTTCTGCCGATCTCGCGTGCCTTCTATCCTACCCAAGACCGAGGCTGGCTCCTTCATTTCTGGGATCTTGA GGCCAAATGGATATTCACTGCCTTGCCGTTTGGGTTTTTGACCATGCTCCTGTTCTACTACGACCACGTAAGTGT TCCGACCATCATCTGACCACCGAAGACTCCTGACGCAGCAACATGGATTCCGGGAGGGGCTAACCCTCATCCTTG TACAGAATATCAGCAGTCTGACCGCTCAGGCGCGCCACTTCCCGCTGAAGAAGCCCTCCGGGTTTCACTGGGACT TCTTTCTATTGGGTTGCACCACCTTCATTGCAGGCATCATAGGAATTCCTATGCCAAATGGTCTTGTTCCACAGG TACTGTTCCTAATTTGCTCCCCATGATAAAGAGACAGACTGATTCAGTGCAGGCTCCAGTCCACACGGACTCCCT AACGGTCTACGAGACGACCCTCCGGGTGATTCCAACCGAGGAAGGGGAAGGTGCCGAGATTCGTCGACCCATCGT CAATGCGAAAGCGGTTATTGAGCAGCGTATCTCCCACTTTGTCATGGGGCTGGCTATTATTGGTACAATGACCGG CCCCTTACTGATTATGCTACATACAATGCCCACTGCTGTCTTCGCAGGTGTTTTCTTCACTGTTGGCTGGGGCTC CATAGAATCGGATGGAATGGTGCAAAAAACCGTCTTTCTCATGCGTGAGAACCGGTTCGTTCAGCGAGACGAGCC TCTACTAACGGTCCGGAAGCGGAAGATCTTGCTCTTTATCGTACTTCAAGGGATCGGTGTTACTGCAACCGTGGC TATCTCCCAGACTATCGCTGCTATCGGTTAG |