Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1059.t1
Gene name
Locationscaffold_003:735873..736404
Strand+
Gene length (bp)531
Transcript length (bp)468
Coding sequence length (bp)468
Protein length (aa) 156

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01679 Pmp3 Proteolipid membrane potential modulator 2.2E-18 5 53

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0005575 cellular_component No
GO:0110165 cellular anatomical entity No
GO:0031224 intrinsic component of membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 6 25 19
2 32 54 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1059.t1
MCGSDIFLAILAVFFPPVSVWIKVGICTADSIINLALCCLGYVPGLLHAWYIILKYPEPDYDDPSYEPLPGDAEN
GRVTYYYVSHQPIQHPSQRGYGTLPPQQPQAANAPPQNRQPTPNHSQEQAQAGSSSQEHHDSRPPPTYAEAVKGD
HKVQD*
Coding >Ani_SJS100_1|g1059.t1
ATGTGTGGTTCAGACATCTTTCTAGCGATTCTCGCGGTTTTCTTTCCCCCAGTCTCGGTGTGGATCAAAGTAGGC
ATTTGCACGGCCGATTCCATCATCAACCTTGCTCTCTGCTGCCTTGGCTACGTGCCCGGGCTTTTACACGCCTGG
TACATTATACTCAAGTACCCCGAACCAGATTACGATGACCCTAGCTACGAGCCTCTCCCTGGCGATGCGGAAAAC
GGTCGCGTAACATATTACTATGTTTCCCACCAGCCGATCCAGCATCCCTCCCAGAGGGGCTATGGTACTTTGCCG
CCACAACAGCCCCAAGCAGCAAACGCCCCGCCACAGAACCGGCAGCCTACTCCGAATCACTCTCAGGAACAAGCC
CAAGCTGGCAGCAGCAGCCAGGAACATCATGATAGTCGCCCACCTCCTACCTATGCTGAGGCCGTGAAGGGAGAC
CATAAAGTGCAGGACTGA
Transcript >Ani_SJS100_1|g1059.t1
ATGTGTGGTTCAGACATCTTTCTAGCGATTCTCGCGGTTTTCTTTCCCCCAGTCTCGGTGTGGATCAAAGTAGGC
ATTTGCACGGCCGATTCCATCATCAACCTTGCTCTCTGCTGCCTTGGCTACGTGCCCGGGCTTTTACACGCCTGG
TACATTATACTCAAGTACCCCGAACCAGATTACGATGACCCTAGCTACGAGCCTCTCCCTGGCGATGCGGAAAAC
GGTCGCGTAACATATTACTATGTTTCCCACCAGCCGATCCAGCATCCCTCCCAGAGGGGCTATGGTACTTTGCCG
CCACAACAGCCCCAAGCAGCAAACGCCCCGCCACAGAACCGGCAGCCTACTCCGAATCACTCTCAGGAACAAGCC
CAAGCTGGCAGCAGCAGCCAGGAACATCATGATAGTCGCCCACCTCCTACCTATGCTGAGGCCGTGAAGGGAGAC
CATAAAGTGCAGGACTGA
Gene >Ani_SJS100_1|g1059.t1
ATGTGTGGTTCAGACATCTTTCTAGCGATTCTCGCGGTTTTCTTTCCCCCAGTCTCGGGTGAGTATTGATCGCAC
ATTGAATTGCATTTGCGAGAGGACGCATGCTAACCGACTGGCTCAGTGTGGATCAAAGTAGGCATTTGCACGGCC
GATTCCATCATCAACCTTGCTCTCTGCTGCCTTGGCTACGTGCCCGGGCTTTTACACGCCTGGTACATTATACTC
AAGTACCCCGAACCAGATTACGATGACCCTAGCTACGAGCCTCTCCCTGGCGATGCGGAAAACGGTCGCGTAACA
TATTACTATGTTTCCCACCAGCCGATCCAGCATCCCTCCCAGAGGGGCTATGGTACTTTGCCGCCACAACAGCCC
CAAGCAGCAAACGCCCCGCCACAGAACCGGCAGCCTACTCCGAATCACTCTCAGGAACAAGCCCAAGCTGGCAGC
AGCAGCCAGGAACATCATGATAGTCGCCCACCTCCTACCTATGCTGAGGCCGTGAAGGGAGACCATAAAGTGCAG
GACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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