© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10575.t1 |
| Gene name | |
| Location | scaffold_122:34950..36111 |
| Strand | - |
| Gene length (bp) | 1161 |
| Transcript length (bp) | 975 |
| Coding sequence length (bp) | 975 |
| Protein length (aa) | 325 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03619 | Solute_trans_a | Organic solute transporter Ostalpha | 1.4E-47 | 1 | 227 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 24 | 46 | 22 |
| 2 | 78 | 100 | 22 |
| 3 | 120 | 142 | 22 |
| 4 | 162 | 184 | 22 |
| 5 | 199 | 221 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10575.t1 MRICNLIPSYQVLSYISICFPNSYIYLQGFTEVLQGVALYAFLMLLCDYMAPDDTSKVKFFSSLETKRQWQPKKK RNGLAFLSLTWYSVLQYPIITWITAVTQVVTQSLHVYCLESNAPHFAHVWIEVITSLSTSVALNAIIQFYMNMKG YMTEHKPLLKLMAFKLIVGLIFLEKILFLILTGTKVLRYPASMTYIDTLMGLPTMLICLQMVPLSFLVLHAYRTK PYEIPNSVRGLRPQAYQALESDGHEETLLRGMPKHYQGGPWGLRAWAIYLNPLVLFQDVHSAYLMIHNARALQKV QEREEQEQEEMTRYETRYDPGERR* |
| Coding | >Ani_SJS100_1|g10575.t1 ATGCGAATCTGCAATCTCATTCCCTCCTATCAAGTTCTATCTTACATCTCAATCTGCTTTCCGAACTCTTACATC TACCTACAAGGGTTCACCGAGGTGCTCCAGGGCGTGGCGCTATACGCCTTTCTTATGCTACTCTGCGATTACATG GCCCCTGATGATACGAGCAAAGTCAAGTTCTTTTCTTCTCTTGAGACGAAAAGGCAGTGGCAGCCGAAGAAGAAA AGGAACGGTCTTGCATTCCTGAGTTTGACTTGGTACTCGGTGCTTCAATATCCAATAATCACCTGGATTACCGCT GTCACCCAAGTGGTGACCCAGTCATTACATGTCTACTGCCTCGAGAGTAATGCACCTCATTTCGCTCATGTATGG ATCGAAGTGATTACCTCGCTGTCAACCTCAGTAGCCCTCAACGCCATCATCCAATTCTACATGAACATGAAAGGA TACATGACAGAGCACAAGCCACTGCTCAAGCTGATGGCTTTCAAATTGATCGTTGGATTGATCTTTCTAGAGAAG ATCCTCTTCCTCATCCTCACCGGAACAAAAGTCCTCAGATACCCTGCCTCAATGACCTACATAGACACCTTGATG GGCCTTCCGACCATGCTCATCTGCCTGCAGATGGTGCCGCTCTCCTTCCTGGTCCTCCACGCCTACCGCACAAAG CCGTACGAGATCCCGAACTCAGTACGCGGCTTGCGACCCCAAGCATACCAGGCTCTCGAGTCTGACGGCCACGAG GAGACTTTGTTGAGAGGCATGCCGAAACATTATCAGGGCGGACCTTGGGGATTGCGTGCCTGGGCTATTTACTTG AACCCGCTTGTGCTGTTCCAGGATGTCCATTCAGCTTATCTCATGATACATAATGCGCGGGCTTTGCAGAAGGTT CAAGAGAGGGAAGAACAGGAGCAGGAGGAGATGACGAGATATGAGACGAGATATGACCCTGGGGAGAGGAGGTGA |
| Transcript | >Ani_SJS100_1|g10575.t1 ATGCGAATCTGCAATCTCATTCCCTCCTATCAAGTTCTATCTTACATCTCAATCTGCTTTCCGAACTCTTACATC TACCTACAAGGGTTCACCGAGGTGCTCCAGGGCGTGGCGCTATACGCCTTTCTTATGCTACTCTGCGATTACATG GCCCCTGATGATACGAGCAAAGTCAAGTTCTTTTCTTCTCTTGAGACGAAAAGGCAGTGGCAGCCGAAGAAGAAA AGGAACGGTCTTGCATTCCTGAGTTTGACTTGGTACTCGGTGCTTCAATATCCAATAATCACCTGGATTACCGCT GTCACCCAAGTGGTGACCCAGTCATTACATGTCTACTGCCTCGAGAGTAATGCACCTCATTTCGCTCATGTATGG ATCGAAGTGATTACCTCGCTGTCAACCTCAGTAGCCCTCAACGCCATCATCCAATTCTACATGAACATGAAAGGA TACATGACAGAGCACAAGCCACTGCTCAAGCTGATGGCTTTCAAATTGATCGTTGGATTGATCTTTCTAGAGAAG ATCCTCTTCCTCATCCTCACCGGAACAAAAGTCCTCAGATACCCTGCCTCAATGACCTACATAGACACCTTGATG GGCCTTCCGACCATGCTCATCTGCCTGCAGATGGTGCCGCTCTCCTTCCTGGTCCTCCACGCCTACCGCACAAAG CCGTACGAGATCCCGAACTCAGTACGCGGCTTGCGACCCCAAGCATACCAGGCTCTCGAGTCTGACGGCCACGAG GAGACTTTGTTGAGAGGCATGCCGAAACATTATCAGGGCGGACCTTGGGGATTGCGTGCCTGGGCTATTTACTTG AACCCGCTTGTGCTGTTCCAGGATGTCCATTCAGCTTATCTCATGATACATAATGCGCGGGCTTTGCAGAAGGTT CAAGAGAGGGAAGAACAGGAGCAGGAGGAGATGACGAGATATGAGACGAGATATGACCCTGGGGAGAGGAGGTGA |
| Gene | >Ani_SJS100_1|g10575.t1 ATGCGAATCTGCAATCTCATTCCCTCCTATCAAGTTCTATCTTACATCTCAATCTGCTTTCCGAACTCTTACATC TACCTACAAGGGTTCACCGAGGTGCTCCAGGGCGTGGCGCTATACGCCTTTCTTATGCTACTCTGCGATTACATG GCCCCTGATGATACGAGCAAAGTCAAGTTCTTTTCTTCTCTTGAGACGAAAAGGCAGTGGCAGCCGAAGAAGAAA AGGAACGGTCTTGCATTCCTGAGTGTAAGTCTTTTGTTCACAGAATATGATGTAATAATCATTGCTGACCGGTTA TCTGACTCGAAGTTGACTTGGTACTCGGTGCTTCAATATCCAATAATCACCTGGATTACCGCTGTCACCCAAGTG GTGACCCAGTCATTACATGTCTACTGCCTCGAGAGTAATGCACCTCATTTCGCTCATGTATGGGTATGTACCATG TTAAAATCATTGATTGCGTCGCCGAATGGTCGCTTATTAACATCGCTAGATCGAAGTGATTACCTCGCTGTCAAC CTCAGTAGCCCTCAACGCCATCATCCAATTCTACATGAACATGAAAGGATACATGACAGAGCACAAGCCACTGCT CAAGCTGATGGCTTTCAAATTGATCGTTGGATTGATCTTTCTAGAGAAGGTATGCATTTACCTATCCCAAGCCAG ACACCTAATAAGCAGAAATATCTAACAATCACCCAGATCCTCTTCCTCATCCTCACCGGAACAAAAGTCCTCAGA TACCCTGCCTCAATGACCTACATAGACACCTTGATGGGCCTTCCGACCATGCTCATCTGCCTGCAGATGGTGCCG CTCTCCTTCCTGGTCCTCCACGCCTACCGCACAAAGCCGTACGAGATCCCGAACTCAGTACGCGGCTTGCGACCC CAAGCATACCAGGCTCTCGAGTCTGACGGCCACGAGGAGACTTTGTTGAGAGGCATGCCGAAACATTATCAGGGC GGACCTTGGGGATTGCGTGCCTGGGCTATTTACTTGAACCCGCTTGTGCTGTTCCAGGATGTCCATTCAGCTTAT CTCATGATACATAATGCGCGGGCTTTGCAGAAGGTTCAAGAGAGGGAAGAACAGGAGCAGGAGGAGATGACGAGA TATGAGACGAGATATGACCCTGGGGAGAGGAGGTGA |