Protein ID | Ani_SJS100_1|g10557.t1 |
Gene name | |
Location | scaffold_121:55876..58702 |
Strand | + |
Gene length (bp) | 2826 |
Transcript length (bp) | 1623 |
Coding sequence length (bp) | 1623 |
Protein length (aa) | 541 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 9.1E-45 | 304 | 539 |
PF00106 | adh_short | short chain dehydrogenase | 1.2E-43 | 299 | 492 |
PF03151 | TPT | Triose-phosphate Transporter family | 1.2E-19 | 20 | 300 |
PF08659 | KR | KR domain | 7.4E-09 | 301 | 465 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 11 | 33 | 22 |
2 | 43 | 65 | 22 |
3 | 85 | 107 | 22 |
4 | 112 | 134 | 22 |
5 | 141 | 163 | 22 |
6 | 199 | 221 | 22 |
7 | 234 | 256 | 22 |
8 | 261 | 283 | 22 |
9 | 296 | 318 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g10557.t1 MTILDLPAKEASVWPVTLGILSWVFWSNLTILFNKWVIESTEFRYPIILTTWHLVFATLATQLLARTTTMLDGRK KIRMDGRTYVRMIIPIGILYSGSLVCSNIVYLYLNVSFIQMLKACGPIVTLLTSWAWHVKTPSLESFLNILLIAF SVALAVAGEVQFSWLGVTYQLASLVFDANRLVMIQILLSDEGQKMDPLVTLYYSAPVCAFTNFMIAFYTELRGFS WSVIGETGVGVLVANATVGFMLNVSIFVLIGKTSGLTMTLVSVPKNILLIVCSVVIWGTQITPLQMLNDIGGRLA LITGASGGIGAACARQLAAKDVHLALTYSSNPTTITTLQQELQTQHPTLLITIHQVDVSSPGQITTLFTEIQAQH SNRTPDILISNAGYGKRVPQVWDITTEEFDYTLTVNLRASFLLVKGVVEHMKAQRWGRIIFMSSIAGYGGGINGC HYAASKAGLTGMMKNLATRLAEYNISVNDVAPAMIGDTGMIPNAEAIPEVASTIPLGRLGLPEEVANVVTMLVGT GYMTGQSLLLAGGLK* |
Coding | >Ani_SJS100_1|g10557.t1 ATGACGATTCTGGATCTTCCGGCCAAGGAGGCTTCAGTATGGCCTGTTACCCTGGGCATTCTATCGTGGGTGTTT TGGTCGAATTTGACCATTTTATTCAATAAATGGGTTATTGAATCTACTGAATTCCGGTACCCAATCATCCTAACA ACATGGCATCTCGTCTTCGCAACCCTAGCCACTCAACTTCTTGCCCGAACCACCACCATGCTCGACGGTCGCAAG AAAATCCGCATGGACGGCCGAACCTACGTCCGCATGATCATTCCCATCGGCATTCTCTACAGCGGTAGTCTCGTC TGCAGCAACATCGTCTACCTCTACCTGAATGTTTCCTTTATCCAGATGCTCAAAGCATGCGGCCCAATAGTAACC CTCCTCACCAGCTGGGCCTGGCACGTCAAAACCCCCTCGCTCGAATCCTTCCTCAACATCCTCCTCATCGCCTTC AGTGTCGCCCTCGCTGTCGCCGGCGAAGTCCAATTCTCCTGGCTCGGCGTCACCTACCAACTCGCCAGTCTTGTC TTCGACGCCAACCGTCTTGTCATGATCCAGATCCTGCTGTCAGACGAGGGCCAGAAAATGGACCCCCTTGTGACT TTGTACTATTCTGCACCGGTGTGCGCCTTCACCAACTTCATGATTGCGTTTTATACTGAGCTGCGCGGGTTCAGT TGGAGTGTGATTGGGGAGACTGGGGTCGGGGTTTTGGTTGCGAACGCTACGGTGGGGTTCATGTTGAATGTGTCG ATTTTTGTTTTGATCGGAAAGACATCCGGTTTGACCATGACACTGGTTAGTGTGCCGAAGAACATCCTGTTGATT GTCTGTTCTGTGGTGATCTGGGGCACGCAGATCACTCCGCTTCAGATGCTAAATGACATCGGTGGCCGATTGGCC CTCATCACCGGCGCCTCAGGAGGAATCGGTGCCGCCTGCGCCCGTCAACTAGCCGCCAAAGATGTGCACCTAGCC CTCACCTACTCATCCAATCCCACAACCATAACCACCCTTCAACAAGAACTCCAAACCCAACACCCCACCCTCCTC ATCACAATCCATCAAGTCGACGTCTCCTCCCCCGGCCAAATAACTACCCTTTTCACCGAGATCCAAGCCCAACAC AGCAACCGCACCCCAGACATCCTCATCTCCAATGCCGGGTACGGCAAACGCGTCCCGCAAGTATGGGACATCACG ACAGAGGAATTTGACTACACTCTGACCGTGAATCTGCGGGCCTCCTTCCTGCTCGTCAAAGGGGTAGTCGAGCAC ATGAAGGCGCAGCGCTGGGGGCGGATTATCTTCATGTCGTCGATTGCGGGGTATGGAGGCGGCATTAATGGGTGT CATTATGCGGCATCGAAGGCAGGGTTGACGGGCATGATGAAGAACTTGGCAACGAGGTTAGCAGAGTACAATATT AGTGTCAATGATGTTGCGCCGGCGATGATTGGAGATACGGGAATGATTCCTAATGCCGAGGCAATTCCGGAGGTG GCAAGCACGATACCCCTGGGGAGGCTGGGATTGCCGGAGGAGGTTGCTAATGTTGTCACTATGTTAGTGGGGACG GGGTATATGACGGGGCAGAGTTTGCTGTTAGCGGGAGGATTGAAATAA |
Transcript | >Ani_SJS100_1|g10557.t1 ATGACGATTCTGGATCTTCCGGCCAAGGAGGCTTCAGTATGGCCTGTTACCCTGGGCATTCTATCGTGGGTGTTT TGGTCGAATTTGACCATTTTATTCAATAAATGGGTTATTGAATCTACTGAATTCCGGTACCCAATCATCCTAACA ACATGGCATCTCGTCTTCGCAACCCTAGCCACTCAACTTCTTGCCCGAACCACCACCATGCTCGACGGTCGCAAG AAAATCCGCATGGACGGCCGAACCTACGTCCGCATGATCATTCCCATCGGCATTCTCTACAGCGGTAGTCTCGTC TGCAGCAACATCGTCTACCTCTACCTGAATGTTTCCTTTATCCAGATGCTCAAAGCATGCGGCCCAATAGTAACC CTCCTCACCAGCTGGGCCTGGCACGTCAAAACCCCCTCGCTCGAATCCTTCCTCAACATCCTCCTCATCGCCTTC AGTGTCGCCCTCGCTGTCGCCGGCGAAGTCCAATTCTCCTGGCTCGGCGTCACCTACCAACTCGCCAGTCTTGTC TTCGACGCCAACCGTCTTGTCATGATCCAGATCCTGCTGTCAGACGAGGGCCAGAAAATGGACCCCCTTGTGACT TTGTACTATTCTGCACCGGTGTGCGCCTTCACCAACTTCATGATTGCGTTTTATACTGAGCTGCGCGGGTTCAGT TGGAGTGTGATTGGGGAGACTGGGGTCGGGGTTTTGGTTGCGAACGCTACGGTGGGGTTCATGTTGAATGTGTCG ATTTTTGTTTTGATCGGAAAGACATCCGGTTTGACCATGACACTGGTTAGTGTGCCGAAGAACATCCTGTTGATT GTCTGTTCTGTGGTGATCTGGGGCACGCAGATCACTCCGCTTCAGATGCTAAATGACATCGGTGGCCGATTGGCC CTCATCACCGGCGCCTCAGGAGGAATCGGTGCCGCCTGCGCCCGTCAACTAGCCGCCAAAGATGTGCACCTAGCC CTCACCTACTCATCCAATCCCACAACCATAACCACCCTTCAACAAGAACTCCAAACCCAACACCCCACCCTCCTC ATCACAATCCATCAAGTCGACGTCTCCTCCCCCGGCCAAATAACTACCCTTTTCACCGAGATCCAAGCCCAACAC AGCAACCGCACCCCAGACATCCTCATCTCCAATGCCGGGTACGGCAAACGCGTCCCGCAAGTATGGGACATCACG ACAGAGGAATTTGACTACACTCTGACCGTGAATCTGCGGGCCTCCTTCCTGCTCGTCAAAGGGGTAGTCGAGCAC ATGAAGGCGCAGCGCTGGGGGCGGATTATCTTCATGTCGTCGATTGCGGGGTATGGAGGCGGCATTAATGGGTGT CATTATGCGGCATCGAAGGCAGGGTTGACGGGCATGATGAAGAACTTGGCAACGAGGTTAGCAGAGTACAATATT AGTGTCAATGATGTTGCGCCGGCGATGATTGGAGATACGGGAATGATTCCTAATGCCGAGGCAATTCCGGAGGTG GCAAGCACGATACCCCTGGGGAGGCTGGGATTGCCGGAGGAGGTTGCTAATGTTGTCACTATGTTAGTGGGGACG GGGTATATGACGGGGCAGAGTTTGCTGTTAGCGGGAGGATTGAAATAA |
Gene | >Ani_SJS100_1|g10557.t1 ATGACGATTCTGGATCTTCCGGCCAAGGAGGCTTCAGTATGGCCTGTTACCCTGGGCATTCTGTATGTAGTCACC AGTCAGCCAGAATAACCAGCGTTAACCATTGGATGTAGATCGTGGGTGTTTTGGTCGAATTTGACCATTTTATTC AATAAATGGGTTATTGAATCTACTGAATTCCGTACGTGAATCTTTCTACTTCACTGTACTCATCATGGACATGAA CTTCCTACTAACGTATCCCAGGGTACCGTGAGTCTCTCTGTATTAGGTGAACAATTCCATCAATACAGTCTAATC ACCGACACATCTCCGCAGCAATCATCCTAACAACATGGCATCTCGTCTTCGCAACCCTAGCCACTCAACTTCTTG CCCGAACCACCACCATGCTCGACGGTCGCAAGAAAATCCGCATGGACGGCCGAACCTACGTCCGCATGATCATTC CCATCGGCATTCTCTACAGCGGTAGTCTCGTCTGCAGCAACATCGTCTACCTCTACCTGAATGTTTCCTTTATCC AGATGCTCAAAGTAAGCCCACCCCCACCATTCACTATCCCCTCAACCCCCAATATAAATTTTCAATACTAAGGAA AGCAAAACAGGCATGCGGCCCAATAGTAACCCTCCTCACCAGCTGGGCCTGGCACGTCAAAACCCCCTCGCTCGA ATCCTTCCTCAACATCCTCCTCATCGCCTTCAGTGTCGCCCTCGCTGTCGCCGGCGAAGTCCAATTCTCCTGGCT CGGCGTCACCTACCAACTCGCCAGTCTTGTCTTCGACGCCAACCGTCTTGTCATGATCCAGATCCTGCTGTCAGA CGAGGGCCAGAAAATGGACCCCCTTGTGACTTTGTACTATTCTGCACCGGTGTGCGCCTTCACCAACTTCATGAT TGCGTTTTATACTGAGCTGCGCGGGTTCAGTTGGAGTGTGATTGGGGAGACTGGGGTCGGGGTTTTGGTTGCGAA CGCTACGGTGGGGTTCATGTTGAATGTGTCGATTTTTGTTTTGGTATGTATATTTCCTTCCTTTCTGGTTGGTGG TCAGGTGGTGAATGTGCGTGGATGCTAATGAGTATGAATATGTATAGATCGGAAAGACATCCGGTTTGACCATGA CACTGGTTAGTGTGCCGAAGAACATCCTGTTGATTGTCTGTTCTGTGGTGATCTGGGGCACGCAGATCACTCCGC TTCAGATGGTGGGGTATGCTATTGCGCTGTTGGGGTTGTTGTATTATTCTCTGGGGTGGGCGACTATTAGGGGGG CATATGATGCTGGGTATGTCAGGTTGGTTGGAAGGCAAGCGGAGAGGATGAAGGAGGAGGAGGATGTATAGAGAG GATTGTGTGCAGTTGTTTGATGACTTTTATCTTGGTGTTGTTGTGTGAGGGTTTTAGATCGGTGCCTAGTGAGGT ATGTAATATACGATAATATCATACTCAAGTGTTTTGATTTCATTCGAATCATAATACCGAATCAACTTCCAGGGA CTACATTCTTGGGCTCATATCAGCAAAGCAGAAGTCTCGGATCATCGGTGTGGATAACTCGCTCAGACGATAAAG CACCGCGCAAAGAGAAAGCTATAAAGCACAGTACTACAGCCGCCTCTCAGTAGGTACTTGTACGCATTATAAAAA CACTAAGTAGGGTTATGGCTGCTCTCGTCCAGGTTTACGGCTATTTACCAATTCGAAGCATTATAGCCCCCTTGG ATTTTATGGATATGTGCCTCTGCGTATATAGCCGGCTAACTCTTGCGATTTCACTAGAAAGCGTATTTCGGCGCT GCACCGTCGGAACAATGCCCGGGGAGTGGATCGGGAATGTCGCGGGGTTGGGACCGGAATTGCGCCGACCAGCGG GGAAAGACTTTAGGAGCAAGCAGTTCTACTATATCTATCATCCTTTCCCAGAAACCCCAATACTAATACTTGAGC AGTTACATCTTTCCCATCCTCAAGTCTCATCACCAAACTCACCATGGACCAGCTAAATGACATCGGTGGCCGATT GGCCCTCATCACCGGCGCCTCAGGAGGGTAAACTCTCTTCCACTCTCATCCATACCACAATTGAAACCAACACAT CCATGATTAACAAACGATGACTATAGAATCGGTGCCGCCTGCGCCCGTCAACTAGCCGCCAAAGATGTGCACCTA GCCCTCACCTACTCATCCAATCCCACAACCATAACCACCCTTCAACAAGAACTCCAAACCCAACACCCCACCCTC CTCATCACAATCCATCAAGTCGACGTCTCCTCCCCCGGCCAAATAACTACCCTTTTCACCGAGATCCAAGCCCAA CACAGCAACCGCACCCCAGACATCCTCATCTCCAATGCCGGGTACGGCAAACGCGTCCCGCAAGTATGGGACATC ACGACAGAGGAATTTGACTACACTCTGACCGTGAATCTGCGGGCCTCCTTCCTGCTCGTCAAAGGGGTAGTCGAG CACATGAAGGCGCAGCGCTGGGGGCGGATTATCTTCATGTCGTCGATTGCGGGGTATGGAGGCGGCATTAATGGG TGTCATTATGCGGCATCGAAGGCAGGGTTGACGGGCATGATGAAGAACTTGGCAACGAGGTTAGCAGAGTACAAT ATTAGTGTCAATGATGTTGCGCCGGCGATGATTGGAGATACGGGAATGATTCCTAATGCCGAGGCAATTCCGGAG GTGGCAAGCACGATACCCCTGGGGAGGCTGGGATTGCCGGAGGAGGTTGCTAATGTTGTCACTATGTTAGTGGGG ACGGGGTATATGACGGGGCAGAGTTTGCTGTTAGCGGGAGGATTGAAATAA |