© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10556.t1 |
| Gene name | |
| Location | scaffold_121:53285..54456 |
| Strand | + |
| Gene length (bp) | 1171 |
| Transcript length (bp) | 1116 |
| Coding sequence length (bp) | 1116 |
| Protein length (aa) | 372 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04488 | Gly_transf_sug | Glycosyltransferase sugar-binding region containing DXD motif | 1.1E-11 | 96 | 175 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 26 | 45 | 19 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| GT32 | 3.5E-18 | 98 | 176 |
| Orthofinder run ID | 3 |
| Orthogroup | 878 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10556.t1 MILQSSSRGSCLQWLTSQFNRRRFQLSFALAIVLLLSYLFHLDVLPTNYETPFKDHYARTLSARDLLARPLSQDL TTIPKLIHQTWFPAGSNMSDDAQTWVRTMRSQNADWEYVLWDDETNRMLVEQYFPWFLTDYNRLPKEIHRADVVR NLYMYLFGGMYADVDTEALRPVEPLFTSHFTTLAKHNQILSSGPRKNDHDCTQRGFVGHMAHKEGLDGPAAVPNG WMASPPGHPFWLLPVIHVIENPNGNGDGSVESLTGPGALGTMLHKYYEDFKDSSVRTHVCRTVRRWSPAWDLYCG PEGSEEEVGAKADKMVVLPRQQIYPYSWADDKHPACLAAWGNPDFNPDECKRWIDVDEWPSYFITYCTHSW* |
| Coding | >Ani_SJS100_1|g10556.t1 ATGATACTTCAATCATCTTCTCGAGGATCCTGCCTCCAATGGCTCACATCCCAATTTAACCGGCGTCGATTTCAG CTCTCGTTCGCTCTTGCCATTGTTCTTCTCCTCTCCTACCTCTTCCATCTTGATGTCCTCCCAACGAACTATGAG ACCCCCTTCAAAGACCACTATGCTCGCACCCTTTCAGCACGAGACCTTCTCGCCCGTCCGCTCTCTCAAGACCTT ACCACCATCCCTAAGCTTATCCATCAGACGTGGTTTCCTGCCGGTAGCAATATGAGCGACGATGCCCAAACCTGG GTACGGACAATGCGCTCTCAAAATGCAGATTGGGAGTATGTACTCTGGGATGACGAGACGAATCGGATGCTTGTC GAACAGTACTTCCCTTGGTTCCTGACAGATTACAACCGTCTCCCCAAGGAGATCCATCGAGCAGATGTGGTGCGC AACCTCTACATGTATCTCTTCGGAGGAATGTACGCCGACGTCGACACAGAAGCTCTCCGACCCGTTGAGCCCCTC TTCACCAGCCATTTCACCACCCTCGCCAAGCACAATCAAATCCTCTCCTCAGGGCCGCGCAAGAACGACCATGAC TGCACGCAGCGCGGATTTGTCGGCCACATGGCACACAAAGAAGGACTGGATGGCCCCGCCGCCGTCCCTAATGGT TGGATGGCATCACCCCCCGGCCACCCTTTTTGGCTCCTGCCTGTAATCCACGTGATTGAGAACCCCAACGGGAAT GGCGATGGATCTGTCGAGTCACTCACGGGGCCTGGGGCACTCGGTACTATGCTACACAAGTATTACGAGGACTTT AAGGATAGTTCGGTGCGGACGCATGTGTGTCGAACGGTGCGGCGGTGGTCACCTGCGTGGGATTTGTACTGTGGA CCGGAGGGCAGTGAGGAAGAGGTTGGGGCAAAAGCTGATAAGATGGTGGTGCTACCGCGACAGCAGATCTATCCG TATAGCTGGGCGGATGATAAGCATCCGGCATGTCTGGCAGCATGGGGAAACCCGGACTTCAATCCGGATGAGTGT AAGCGGTGGATTGATGTGGATGAGTGGCCGAGTTATTTCATTACATATTGTACGCATTCGTGGTGA |
| Transcript | >Ani_SJS100_1|g10556.t1 ATGATACTTCAATCATCTTCTCGAGGATCCTGCCTCCAATGGCTCACATCCCAATTTAACCGGCGTCGATTTCAG CTCTCGTTCGCTCTTGCCATTGTTCTTCTCCTCTCCTACCTCTTCCATCTTGATGTCCTCCCAACGAACTATGAG ACCCCCTTCAAAGACCACTATGCTCGCACCCTTTCAGCACGAGACCTTCTCGCCCGTCCGCTCTCTCAAGACCTT ACCACCATCCCTAAGCTTATCCATCAGACGTGGTTTCCTGCCGGTAGCAATATGAGCGACGATGCCCAAACCTGG GTACGGACAATGCGCTCTCAAAATGCAGATTGGGAGTATGTACTCTGGGATGACGAGACGAATCGGATGCTTGTC GAACAGTACTTCCCTTGGTTCCTGACAGATTACAACCGTCTCCCCAAGGAGATCCATCGAGCAGATGTGGTGCGC AACCTCTACATGTATCTCTTCGGAGGAATGTACGCCGACGTCGACACAGAAGCTCTCCGACCCGTTGAGCCCCTC TTCACCAGCCATTTCACCACCCTCGCCAAGCACAATCAAATCCTCTCCTCAGGGCCGCGCAAGAACGACCATGAC TGCACGCAGCGCGGATTTGTCGGCCACATGGCACACAAAGAAGGACTGGATGGCCCCGCCGCCGTCCCTAATGGT TGGATGGCATCACCCCCCGGCCACCCTTTTTGGCTCCTGCCTGTAATCCACGTGATTGAGAACCCCAACGGGAAT GGCGATGGATCTGTCGAGTCACTCACGGGGCCTGGGGCACTCGGTACTATGCTACACAAGTATTACGAGGACTTT AAGGATAGTTCGGTGCGGACGCATGTGTGTCGAACGGTGCGGCGGTGGTCACCTGCGTGGGATTTGTACTGTGGA CCGGAGGGCAGTGAGGAAGAGGTTGGGGCAAAAGCTGATAAGATGGTGGTGCTACCGCGACAGCAGATCTATCCG TATAGCTGGGCGGATGATAAGCATCCGGCATGTCTGGCAGCATGGGGAAACCCGGACTTCAATCCGGATGAGTGT AAGCGGTGGATTGATGTGGATGAGTGGCCGAGTTATTTCATTACATATTGTACGCATTCGTGGTGA |
| Gene | >Ani_SJS100_1|g10556.t1 ATGATACTTCAATCATCTTCTCGAGGATCCTGCCTCCAATGGCTCACATCCCAATTTAACCGGCGTCGATTTCAG CTCTCGTTCGCTCTTGCCATTGTTCTTCTCCTCTCCTACCTCTTCCATCTTGATGTCCTCCCAACGAACTATGAG ACCCCCTTCAAAGACCACTATGCTCGCACCCTTTCAGCACGAGACCTTCTCGCCCGTCCGCTCTCTCAAGACCTT ACCACCATCCCTAAGCTTATCCATCAGACGTGGTTTCCTGCCGGTAGCAATATGAGCGACGATGCCCAAACCTGG GTACGGACAATGCGCTCTCAAAATGCAGATTGGGAGTATGTACTCTGGGATGACGAGACGAATCGGATGCTTGTC GAACAGTACTTCCCTTGGTTCCTGACAGATTACAACCGTCTCCCCAAGGAGATCCATCGAGCAGATGTGGTGCGC AACCTCTACATGTATCTCTTCGGAGGGTAGGTCACCACCGCAACCATAACCCTCGGATTAGCTGACAGTGATGAT CTACAGAATGTACGCCGACGTCGACACAGAAGCTCTCCGACCCGTTGAGCCCCTCTTCACCAGCCATTTCACCAC CCTCGCCAAGCACAATCAAATCCTCTCCTCAGGGCCGCGCAAGAACGACCATGACTGCACGCAGCGCGGATTTGT CGGCCACATGGCACACAAAGAAGGACTGGATGGCCCCGCCGCCGTCCCTAATGGTTGGATGGCATCACCCCCCGG CCACCCTTTTTGGCTCCTGCCTGTAATCCACGTGATTGAGAACCCCAACGGGAATGGCGATGGATCTGTCGAGTC ACTCACGGGGCCTGGGGCACTCGGTACTATGCTACACAAGTATTACGAGGACTTTAAGGATAGTTCGGTGCGGAC GCATGTGTGTCGAACGGTGCGGCGGTGGTCACCTGCGTGGGATTTGTACTGTGGACCGGAGGGCAGTGAGGAAGA GGTTGGGGCAAAAGCTGATAAGATGGTGGTGCTACCGCGACAGCAGATCTATCCGTATAGCTGGGCGGATGATAA GCATCCGGCATGTCTGGCAGCATGGGGAAACCCGGACTTCAATCCGGATGAGTGTAAGCGGTGGATTGATGTGGA TGAGTGGCCGAGTTATTTCATTACATATTGTACGCATTCGTGGTGA |