Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g10554.t1
Gene name
Locationscaffold_121:49186..50493
Strand+
Gene length (bp)1307
Transcript length (bp)1131
Coding sequence length (bp)1131
Protein length (aa) 377

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01755 Glyco_transf_25 Glycosyltransferase family 25 (LPS biosynthesis protein) 2.5E-06 62 159

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 32 0.5

Transmembrane Domains

Domain # Start End Length
1 12 34 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g10554.t1
MIRGKSRFTKYIVAAFASYIILTLLFSGTGGKYWKQDWVRIARSTLEDRALEHIQNETLGFEHIYAIGLKERTDK
RDFLNLAASIAGFRVEWIDGVHPEDMSEKALLNDNLLAPSEIGCWRAHMNALSNMVQNSYSTALILEDDADWDVN
IRQQLREFARGVRALTRNANTTKSAPYGTNWDILWVGGCASSAAPNETQFYAIPHDPTAPSVDHRGTWGGPLNSW
KEIYPETSTRFIYRADMGCCTYGYAVTKRGAERILAALAVDRLVAAVDNSMADMCGGKDGRSQIECYAPFPNIIG
TYKAAGLASKDSDIREGSDEWHEAQAWNLMYSTRLNIHRLVAGRDTVYAQYDEGFPWSRRVLNWKEFEYPRGYLV
S*
Coding >Ani_SJS100_1|g10554.t1
ATGATTCGGGGGAAATCCAGATTTACGAAATACATTGTCGCTGCATTCGCCAGTTATATTATTCTCACACTTCTA
TTCAGTGGCACTGGGGGAAAGTATTGGAAACAGGACTGGGTGAGAATCGCGCGGTCCACGCTGGAGGATCGGGCG
CTGGAGCATATTCAAAATGAGACGCTTGGGTTTGAACACATATATGCCATTGGGCTGAAAGAACGAACAGATAAG
CGCGATTTCCTTAACCTCGCTGCGTCAATAGCTGGGTTTCGGGTCGAATGGATAGATGGGGTACATCCAGAGGAC
ATGAGCGAGAAGGCTCTGCTCAACGATAACTTATTAGCACCATCCGAGATAGGATGCTGGCGCGCTCATATGAAC
GCTTTGAGCAATATGGTCCAAAACTCCTACTCGACTGCGCTTATCCTTGAAGACGACGCAGACTGGGACGTTAAC
ATTAGGCAGCAACTCCGCGAATTTGCCCGAGGGGTGCGCGCGTTAACCAGAAATGCTAATACGACCAAGAGCGCT
CCCTACGGCACCAACTGGGACATCCTCTGGGTGGGCGGATGCGCTTCATCTGCCGCTCCCAACGAGACCCAATTC
TATGCCATCCCGCATGACCCAACTGCCCCCAGTGTCGATCACCGTGGTACATGGGGCGGCCCCCTCAACTCATGG
AAAGAGATTTACCCTGAGACATCGACTCGTTTCATTTATCGGGCCGATATGGGCTGCTGCACCTATGGGTACGCG
GTGACAAAGCGAGGTGCGGAGAGAATCCTAGCAGCCTTAGCGGTCGACCGACTCGTGGCTGCAGTGGATAACTCC
ATGGCTGATATGTGTGGTGGTAAGGATGGCCGTTCGCAGATTGAGTGTTATGCGCCGTTTCCCAACATTATCGGG
ACGTACAAGGCGGCCGGTCTTGCTTCGAAGGATTCGGACATCCGTGAAGGCAGCGACGAATGGCACGAGGCACAG
GCCTGGAATCTCATGTATAGCACCCGATTGAATATTCATCGACTGGTGGCCGGTAGGGATACCGTATATGCGCAG
TATGATGAGGGTTTTCCTTGGTCGCGGCGCGTGTTGAATTGGAAGGAGTTCGAGTACCCCAGGGGTTATCTAGTT
TCTTGA
Transcript >Ani_SJS100_1|g10554.t1
ATGATTCGGGGGAAATCCAGATTTACGAAATACATTGTCGCTGCATTCGCCAGTTATATTATTCTCACACTTCTA
TTCAGTGGCACTGGGGGAAAGTATTGGAAACAGGACTGGGTGAGAATCGCGCGGTCCACGCTGGAGGATCGGGCG
CTGGAGCATATTCAAAATGAGACGCTTGGGTTTGAACACATATATGCCATTGGGCTGAAAGAACGAACAGATAAG
CGCGATTTCCTTAACCTCGCTGCGTCAATAGCTGGGTTTCGGGTCGAATGGATAGATGGGGTACATCCAGAGGAC
ATGAGCGAGAAGGCTCTGCTCAACGATAACTTATTAGCACCATCCGAGATAGGATGCTGGCGCGCTCATATGAAC
GCTTTGAGCAATATGGTCCAAAACTCCTACTCGACTGCGCTTATCCTTGAAGACGACGCAGACTGGGACGTTAAC
ATTAGGCAGCAACTCCGCGAATTTGCCCGAGGGGTGCGCGCGTTAACCAGAAATGCTAATACGACCAAGAGCGCT
CCCTACGGCACCAACTGGGACATCCTCTGGGTGGGCGGATGCGCTTCATCTGCCGCTCCCAACGAGACCCAATTC
TATGCCATCCCGCATGACCCAACTGCCCCCAGTGTCGATCACCGTGGTACATGGGGCGGCCCCCTCAACTCATGG
AAAGAGATTTACCCTGAGACATCGACTCGTTTCATTTATCGGGCCGATATGGGCTGCTGCACCTATGGGTACGCG
GTGACAAAGCGAGGTGCGGAGAGAATCCTAGCAGCCTTAGCGGTCGACCGACTCGTGGCTGCAGTGGATAACTCC
ATGGCTGATATGTGTGGTGGTAAGGATGGCCGTTCGCAGATTGAGTGTTATGCGCCGTTTCCCAACATTATCGGG
ACGTACAAGGCGGCCGGTCTTGCTTCGAAGGATTCGGACATCCGTGAAGGCAGCGACGAATGGCACGAGGCACAG
GCCTGGAATCTCATGTATAGCACCCGATTGAATATTCATCGACTGGTGGCCGGTAGGGATACCGTATATGCGCAG
TATGATGAGGGTTTTCCTTGGTCGCGGCGCGTGTTGAATTGGAAGGAGTTCGAGTACCCCAGGGGTTATCTAGTT
TCTTGA
Gene >Ani_SJS100_1|g10554.t1
ATGATTCGGGGGAAATCCAGATTTACGAAATACATTGTCGCTGCATTCGCCAGTTATATTATTCTCACACTTCTA
TTCAGTGGCACTGGGGGAAAGTATTGGAAACAGGACTGGGTGAGAATCGCGCGGTCCACGCTGGAGGATCGGGCG
CTGGAGCATATTCAAAATGAGACGCTTGGGGTTTGTTCTTTTTCATATTTTTCGATGATGCCCGTTACATATTTG
CTGATAGTCTTCGACAGTTTGAACACATATATGCCATTGGGCTGAAAGAACGAACAGATAAGCGCGATTTCCTTA
ACCTCGCTGCGTCAATAGCTGGGTTTCGGGTCGAATGGATAGATGGGGTACATCCAGAGGACATGAGCGAGAAGG
CTCTGCTCAACGTATGCTGCTTTGTGCCTAGGACTTTGCGCCTAATTAACACGGTTTTTAGGATAACTTATTAGC
ACCATCCGAGATAGGATGCTGGCGCGCTCATATGAACGCTTTGAGCAAGTCAGTCTGCTCCTTTGTCAATGCGGC
AACCCTACTGATATAAGCTGACATTCTCATGATATAGTATGGTCCAAAACTCCTACTCGACTGCGCTTATCCTTG
AAGACGACGCAGACTGGGACGTTAACATTAGGCAGCAACTCCGCGAATTTGCCCGAGGGGTGCGCGCGTTAACCA
GAAATGCTAATACGACCAAGAGCGCTCCCTACGGCACCAACTGGGACATCCTCTGGGTGGGCGGATGCGCTTCAT
CTGCCGCTCCCAACGAGACCCAATTCTATGCCATCCCGCATGACCCAACTGCCCCCAGTGTCGATCACCGTGGTA
CATGGGGCGGCCCCCTCAACTCATGGAAAGAGATTTACCCTGAGACATCGACTCGTTTCATTTATCGGGCCGATA
TGGGCTGCTGCACCTATGGGTACGCGGTGACAAAGCGAGGTGCGGAGAGAATCCTAGCAGCCTTAGCGGTCGACC
GACTCGTGGCTGCAGTGGATAACTCCATGGCTGATATGTGTGGTGGTAAGGATGGCCGTTCGCAGATTGAGTGTT
ATGCGCCGTTTCCCAACATTATCGGGACGTACAAGGCGGCCGGTCTTGCTTCGAAGGATTCGGACATCCGTGAAG
GCAGCGACGAATGGCACGAGGCACAGGCCTGGAATCTCATGTATAGCACCCGATTGAATATTCATCGACTGGTGG
CCGGTAGGGATACCGTATATGCGCAGTATGATGAGGGTTTTCCTTGGTCGCGGCGCGTGTTGAATTGGAAGGAGT
TCGAGTACCCCAGGGGTTATCTAGTTTCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail