Protein ID | Ani_SJS100_1|g10554.t1 |
Gene name | |
Location | scaffold_121:49186..50493 |
Strand | + |
Gene length (bp) | 1307 |
Transcript length (bp) | 1131 |
Coding sequence length (bp) | 1131 |
Protein length (aa) | 377 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01755 | Glyco_transf_25 | Glycosyltransferase family 25 (LPS biosynthesis protein) | 2.5E-06 | 62 | 159 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 32 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 12 | 34 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g10554.t1 MIRGKSRFTKYIVAAFASYIILTLLFSGTGGKYWKQDWVRIARSTLEDRALEHIQNETLGFEHIYAIGLKERTDK RDFLNLAASIAGFRVEWIDGVHPEDMSEKALLNDNLLAPSEIGCWRAHMNALSNMVQNSYSTALILEDDADWDVN IRQQLREFARGVRALTRNANTTKSAPYGTNWDILWVGGCASSAAPNETQFYAIPHDPTAPSVDHRGTWGGPLNSW KEIYPETSTRFIYRADMGCCTYGYAVTKRGAERILAALAVDRLVAAVDNSMADMCGGKDGRSQIECYAPFPNIIG TYKAAGLASKDSDIREGSDEWHEAQAWNLMYSTRLNIHRLVAGRDTVYAQYDEGFPWSRRVLNWKEFEYPRGYLV S* |
Coding | >Ani_SJS100_1|g10554.t1 ATGATTCGGGGGAAATCCAGATTTACGAAATACATTGTCGCTGCATTCGCCAGTTATATTATTCTCACACTTCTA TTCAGTGGCACTGGGGGAAAGTATTGGAAACAGGACTGGGTGAGAATCGCGCGGTCCACGCTGGAGGATCGGGCG CTGGAGCATATTCAAAATGAGACGCTTGGGTTTGAACACATATATGCCATTGGGCTGAAAGAACGAACAGATAAG CGCGATTTCCTTAACCTCGCTGCGTCAATAGCTGGGTTTCGGGTCGAATGGATAGATGGGGTACATCCAGAGGAC ATGAGCGAGAAGGCTCTGCTCAACGATAACTTATTAGCACCATCCGAGATAGGATGCTGGCGCGCTCATATGAAC GCTTTGAGCAATATGGTCCAAAACTCCTACTCGACTGCGCTTATCCTTGAAGACGACGCAGACTGGGACGTTAAC ATTAGGCAGCAACTCCGCGAATTTGCCCGAGGGGTGCGCGCGTTAACCAGAAATGCTAATACGACCAAGAGCGCT CCCTACGGCACCAACTGGGACATCCTCTGGGTGGGCGGATGCGCTTCATCTGCCGCTCCCAACGAGACCCAATTC TATGCCATCCCGCATGACCCAACTGCCCCCAGTGTCGATCACCGTGGTACATGGGGCGGCCCCCTCAACTCATGG AAAGAGATTTACCCTGAGACATCGACTCGTTTCATTTATCGGGCCGATATGGGCTGCTGCACCTATGGGTACGCG GTGACAAAGCGAGGTGCGGAGAGAATCCTAGCAGCCTTAGCGGTCGACCGACTCGTGGCTGCAGTGGATAACTCC ATGGCTGATATGTGTGGTGGTAAGGATGGCCGTTCGCAGATTGAGTGTTATGCGCCGTTTCCCAACATTATCGGG ACGTACAAGGCGGCCGGTCTTGCTTCGAAGGATTCGGACATCCGTGAAGGCAGCGACGAATGGCACGAGGCACAG GCCTGGAATCTCATGTATAGCACCCGATTGAATATTCATCGACTGGTGGCCGGTAGGGATACCGTATATGCGCAG TATGATGAGGGTTTTCCTTGGTCGCGGCGCGTGTTGAATTGGAAGGAGTTCGAGTACCCCAGGGGTTATCTAGTT TCTTGA |
Transcript | >Ani_SJS100_1|g10554.t1 ATGATTCGGGGGAAATCCAGATTTACGAAATACATTGTCGCTGCATTCGCCAGTTATATTATTCTCACACTTCTA TTCAGTGGCACTGGGGGAAAGTATTGGAAACAGGACTGGGTGAGAATCGCGCGGTCCACGCTGGAGGATCGGGCG CTGGAGCATATTCAAAATGAGACGCTTGGGTTTGAACACATATATGCCATTGGGCTGAAAGAACGAACAGATAAG CGCGATTTCCTTAACCTCGCTGCGTCAATAGCTGGGTTTCGGGTCGAATGGATAGATGGGGTACATCCAGAGGAC ATGAGCGAGAAGGCTCTGCTCAACGATAACTTATTAGCACCATCCGAGATAGGATGCTGGCGCGCTCATATGAAC GCTTTGAGCAATATGGTCCAAAACTCCTACTCGACTGCGCTTATCCTTGAAGACGACGCAGACTGGGACGTTAAC ATTAGGCAGCAACTCCGCGAATTTGCCCGAGGGGTGCGCGCGTTAACCAGAAATGCTAATACGACCAAGAGCGCT CCCTACGGCACCAACTGGGACATCCTCTGGGTGGGCGGATGCGCTTCATCTGCCGCTCCCAACGAGACCCAATTC TATGCCATCCCGCATGACCCAACTGCCCCCAGTGTCGATCACCGTGGTACATGGGGCGGCCCCCTCAACTCATGG AAAGAGATTTACCCTGAGACATCGACTCGTTTCATTTATCGGGCCGATATGGGCTGCTGCACCTATGGGTACGCG GTGACAAAGCGAGGTGCGGAGAGAATCCTAGCAGCCTTAGCGGTCGACCGACTCGTGGCTGCAGTGGATAACTCC ATGGCTGATATGTGTGGTGGTAAGGATGGCCGTTCGCAGATTGAGTGTTATGCGCCGTTTCCCAACATTATCGGG ACGTACAAGGCGGCCGGTCTTGCTTCGAAGGATTCGGACATCCGTGAAGGCAGCGACGAATGGCACGAGGCACAG GCCTGGAATCTCATGTATAGCACCCGATTGAATATTCATCGACTGGTGGCCGGTAGGGATACCGTATATGCGCAG TATGATGAGGGTTTTCCTTGGTCGCGGCGCGTGTTGAATTGGAAGGAGTTCGAGTACCCCAGGGGTTATCTAGTT TCTTGA |
Gene | >Ani_SJS100_1|g10554.t1 ATGATTCGGGGGAAATCCAGATTTACGAAATACATTGTCGCTGCATTCGCCAGTTATATTATTCTCACACTTCTA TTCAGTGGCACTGGGGGAAAGTATTGGAAACAGGACTGGGTGAGAATCGCGCGGTCCACGCTGGAGGATCGGGCG CTGGAGCATATTCAAAATGAGACGCTTGGGGTTTGTTCTTTTTCATATTTTTCGATGATGCCCGTTACATATTTG CTGATAGTCTTCGACAGTTTGAACACATATATGCCATTGGGCTGAAAGAACGAACAGATAAGCGCGATTTCCTTA ACCTCGCTGCGTCAATAGCTGGGTTTCGGGTCGAATGGATAGATGGGGTACATCCAGAGGACATGAGCGAGAAGG CTCTGCTCAACGTATGCTGCTTTGTGCCTAGGACTTTGCGCCTAATTAACACGGTTTTTAGGATAACTTATTAGC ACCATCCGAGATAGGATGCTGGCGCGCTCATATGAACGCTTTGAGCAAGTCAGTCTGCTCCTTTGTCAATGCGGC AACCCTACTGATATAAGCTGACATTCTCATGATATAGTATGGTCCAAAACTCCTACTCGACTGCGCTTATCCTTG AAGACGACGCAGACTGGGACGTTAACATTAGGCAGCAACTCCGCGAATTTGCCCGAGGGGTGCGCGCGTTAACCA GAAATGCTAATACGACCAAGAGCGCTCCCTACGGCACCAACTGGGACATCCTCTGGGTGGGCGGATGCGCTTCAT CTGCCGCTCCCAACGAGACCCAATTCTATGCCATCCCGCATGACCCAACTGCCCCCAGTGTCGATCACCGTGGTA CATGGGGCGGCCCCCTCAACTCATGGAAAGAGATTTACCCTGAGACATCGACTCGTTTCATTTATCGGGCCGATA TGGGCTGCTGCACCTATGGGTACGCGGTGACAAAGCGAGGTGCGGAGAGAATCCTAGCAGCCTTAGCGGTCGACC GACTCGTGGCTGCAGTGGATAACTCCATGGCTGATATGTGTGGTGGTAAGGATGGCCGTTCGCAGATTGAGTGTT ATGCGCCGTTTCCCAACATTATCGGGACGTACAAGGCGGCCGGTCTTGCTTCGAAGGATTCGGACATCCGTGAAG GCAGCGACGAATGGCACGAGGCACAGGCCTGGAATCTCATGTATAGCACCCGATTGAATATTCATCGACTGGTGG CCGGTAGGGATACCGTATATGCGCAGTATGATGAGGGTTTTCCTTGGTCGCGGCGCGTGTTGAATTGGAAGGAGT TCGAGTACCCCAGGGGTTATCTAGTTTCTTGA |