Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g10543.t1
Gene name
Locationscaffold_121:21403..21928
Strand+
Gene length (bp)525
Transcript length (bp)420
Coding sequence length (bp)420
Protein length (aa) 140

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00085 Thioredoxin Thioredoxin 1.3E-27 50 135
PF13098 Thioredoxin_2 Thioredoxin-like domain 2.9E-06 51 130

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g10543.t1
MELSRIILAIAVYLVLRFIRTRFFGNNTGSTMSHGKVIEVDNPVIFKALTSNGPVVVDFFATWCGPCKAVAPVVG
KLSETYTNVRFIQVDVDKVRSVAQELEVRAMPTFVLYKDGQLQEKRVVGGNMKELEAAIKEITA*
Coding >Ani_SJS100_1|g10543.t1
ATGGAGCTTTCCCGCATTATCCTCGCCATCGCCGTCTACCTTGTCCTCCGCTTCATCCGTACTCGCTTCTTCGGC
AACAACACCGGATCCACCATGTCTCACGGAAAGGTTATTGAGGTTGATAACCCTGTTATCTTCAAGGCGCTTACC
TCCAACGGTCCCGTGGTCGTCGACTTCTTCGCAACCTGGTGCGGTCCGTGCAAGGCCGTGGCGCCAGTGGTCGGC
AAGCTCAGCGAAACCTACACCAATGTGCGCTTCATTCAGGTCGACGTTGATAAGGTCCGTTCGGTGGCGCAGGAA
CTGGAGGTGCGCGCTATGCCCACTTTCGTCCTGTACAAGGATGGCCAGCTGCAGGAGAAGCGCGTCGTGGGTGGA
AACATGAAGGAGCTGGAGGCAGCCATCAAGGAAATTACTGCATAA
Transcript >Ani_SJS100_1|g10543.t1
ATGGAGCTTTCCCGCATTATCCTCGCCATCGCCGTCTACCTTGTCCTCCGCTTCATCCGTACTCGCTTCTTCGGC
AACAACACCGGATCCACCATGTCTCACGGAAAGGTTATTGAGGTTGATAACCCTGTTATCTTCAAGGCGCTTACC
TCCAACGGTCCCGTGGTCGTCGACTTCTTCGCAACCTGGTGCGGTCCGTGCAAGGCCGTGGCGCCAGTGGTCGGC
AAGCTCAGCGAAACCTACACCAATGTGCGCTTCATTCAGGTCGACGTTGATAAGGTCCGTTCGGTGGCGCAGGAA
CTGGAGGTGCGCGCTATGCCCACTTTCGTCCTGTACAAGGATGGCCAGCTGCAGGAGAAGCGCGTCGTGGGTGGA
AACATGAAGGAGCTGGAGGCAGCCATCAAGGAAATTACTGCATAA
Gene >Ani_SJS100_1|g10543.t1
ATGGAGCTTTCCCGCATTATCCTCGCCATCGCCGTCTACCTTGGTAAGCCATACAGACAGTCTCCCGTCTACCTG
CTTACTGACCCCGTACAGTCCTCCGCTTCATCCGTACTCGCTTCTTCGGCAACAACACCGGATCCACCATGTCTC
ACGGAAAGGTTATTGAGGTTGATAAGTGAGCCTTCCTAGCTCTGCTCCGTAACGTGTAAACTGAGAACTGACCGG
TCTAGCCCTGTTATCTTCAAGGCGCTTACCTCCAACGGTCCCGTGGTCGTCGACTTCTTCGCAACCTGGTGCGGT
CCGTGCAAGGCCGTGGCGCCAGTGGTCGGCAAGCTCAGCGAAACCTACACCAATGTGCGCTTCATTCAGGTCGAC
GTTGATAAGGTCCGTTCGGTGGCGCAGGAACTGGAGGTGCGCGCTATGCCCACTTTCGTCCTGTACAAGGATGGC
CAGCTGCAGGAGAAGCGCGTCGTGGGTGGAAACATGAAGGAGCTGGAGGCAGCCATCAAGGAAATTACTGCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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