Protein ID | Ani_SJS100_1|g10541.t1 |
Gene name | |
Location | scaffold_121:16949..18596 |
Strand | - |
Gene length (bp) | 1647 |
Transcript length (bp) | 1539 |
Coding sequence length (bp) | 1539 |
Protein length (aa) | 513 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00899 | ThiF | ThiF family | 6.9E-44 | 105 | 363 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 15 | 37 | 22 |
2 | 120 | 142 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g10541.t1 MASWIQRQGGSHQTQLAATAVISGAAVAGAIFGYQAFRRKEAVQRLKASIPDVNNQHHAEKLTEYGVAAATQLSK EDERSALLARRAQEGDYDDELILEQLARNRVFLSDEGLARLRSSYIIVVGCGGVGSHAVASLARSGVSKIRLIDF DQVTLSSLNRHALATLADVGTPKVHCIRKRLEQITPWVKFDCRNELFGGSVADNLLAPWAWDDHDKGRKPDYVLD CIDNITSKVELLHYCHSHSIPVISAMGAGCKSDPTRVTVGDISLSTDDPLSRSTRRRLKLLGVNTGIPVVFSTEK PGPGKATLLPLNEAEFSKGEVGELSVLPDFRARILPVLGTMPAVFGYTVANHVICDISGYPMDYSVGGKGRDKLY DGVLAALQGTLERLARAEYGPSLVGLRLPISKDDVGYLVDEIFRGKSVVSGLPSRISLVPWKRPDRGFGPDPEWM KQGQTFVPLELKDLVCMTKDEATRHEKEVLLGGKKLEEVYDVKTIETVQKRQQEMEFHEQYR* |
Coding | >Ani_SJS100_1|g10541.t1 ATGGCGTCCTGGATCCAACGCCAGGGTGGATCTCATCAGACACAACTTGCAGCTACAGCCGTGATTTCGGGAGCT GCGGTCGCAGGTGCGATCTTTGGCTACCAGGCATTCAGACGAAAGGAAGCAGTACAGCGCCTCAAGGCGTCCATA CCGGATGTTAACAACCAACACCATGCGGAGAAGCTCACAGAATACGGTGTCGCGGCTGCAACGCAGCTGAGCAAG GAAGATGAAAGGAGTGCGCTTCTTGCTCGGAGGGCGCAGGAAGGAGACTATGATGATGAGCTCATCCTCGAACAA CTCGCCAGAAACCGTGTCTTTCTATCTGATGAGGGCCTCGCGAGACTCCGCTCGTCATACATAATCGTGGTCGGA TGCGGAGGAGTCGGGTCGCATGCCGTTGCATCCCTCGCCCGCTCGGGTGTTTCCAAGATCCGCTTGATCGATTTT GATCAGGTTACGCTTTCCTCATTGAACCGACACGCTCTTGCGACGCTGGCCGACGTCGGAACGCCGAAGGTACAT TGCATTCGCAAGAGACTGGAGCAGATCACACCATGGGTAAAATTCGACTGCCGGAACGAACTATTCGGGGGATCC GTCGCCGACAATCTTCTTGCGCCCTGGGCTTGGGACGATCATGATAAAGGACGCAAGCCCGACTATGTGCTCGAC TGCATCGACAACATTACGTCCAAGGTGGAGCTTCTTCACTATTGTCATTCACACTCAATTCCCGTGATTTCGGCA ATGGGAGCAGGATGCAAGTCAGATCCTACGCGCGTTACGGTCGGTGATATCTCACTCAGCACGGATGACCCGTTG TCGCGGAGCACTCGTCGGCGCCTGAAGTTGTTGGGAGTGAATACAGGCATTCCTGTTGTTTTCTCTACTGAGAAG CCCGGCCCTGGAAAAGCTACTCTTCTCCCATTGAACGAAGCAGAATTTAGTAAGGGTGAGGTTGGTGAGCTTAGT GTGTTGCCCGATTTCCGGGCGCGAATCCTCCCTGTGTTGGGAACAATGCCTGCAGTGTTTGGCTACACCGTGGCG AATCACGTCATCTGCGATATCTCCGGCTATCCGATGGACTACAGCGTGGGTGGAAAGGGTCGTGACAAGTTGTAC GATGGAGTCTTGGCAGCCTTGCAGGGAACGCTCGAGCGCTTGGCCCGGGCGGAGTATGGACCTAGCCTTGTCGGG CTTCGCCTTCCTATCAGCAAGGATGATGTTGGATATTTGGTCGATGAGATCTTCCGCGGCAAGAGTGTGGTCAGT GGCCTGCCCAGTCGAATCAGTCTCGTTCCCTGGAAGCGCCCTGACAGAGGATTCGGACCTGATCCGGAGTGGATG AAGCAGGGACAGACATTTGTTCCGCTTGAGTTGAAGGATTTAGTGTGTATGACCAAAGATGAAGCTACGCGCCAT GAAAAGGAAGTGCTTCTGGGTGGCAAGAAGCTGGAGGAGGTATACGATGTCAAGACGATTGAAACGGTGCAGAAG CGCCAACAGGAGATGGAGTTTCACGAGCAATATCGCTAA |
Transcript | >Ani_SJS100_1|g10541.t1 ATGGCGTCCTGGATCCAACGCCAGGGTGGATCTCATCAGACACAACTTGCAGCTACAGCCGTGATTTCGGGAGCT GCGGTCGCAGGTGCGATCTTTGGCTACCAGGCATTCAGACGAAAGGAAGCAGTACAGCGCCTCAAGGCGTCCATA CCGGATGTTAACAACCAACACCATGCGGAGAAGCTCACAGAATACGGTGTCGCGGCTGCAACGCAGCTGAGCAAG GAAGATGAAAGGAGTGCGCTTCTTGCTCGGAGGGCGCAGGAAGGAGACTATGATGATGAGCTCATCCTCGAACAA CTCGCCAGAAACCGTGTCTTTCTATCTGATGAGGGCCTCGCGAGACTCCGCTCGTCATACATAATCGTGGTCGGA TGCGGAGGAGTCGGGTCGCATGCCGTTGCATCCCTCGCCCGCTCGGGTGTTTCCAAGATCCGCTTGATCGATTTT GATCAGGTTACGCTTTCCTCATTGAACCGACACGCTCTTGCGACGCTGGCCGACGTCGGAACGCCGAAGGTACAT TGCATTCGCAAGAGACTGGAGCAGATCACACCATGGGTAAAATTCGACTGCCGGAACGAACTATTCGGGGGATCC GTCGCCGACAATCTTCTTGCGCCCTGGGCTTGGGACGATCATGATAAAGGACGCAAGCCCGACTATGTGCTCGAC TGCATCGACAACATTACGTCCAAGGTGGAGCTTCTTCACTATTGTCATTCACACTCAATTCCCGTGATTTCGGCA ATGGGAGCAGGATGCAAGTCAGATCCTACGCGCGTTACGGTCGGTGATATCTCACTCAGCACGGATGACCCGTTG TCGCGGAGCACTCGTCGGCGCCTGAAGTTGTTGGGAGTGAATACAGGCATTCCTGTTGTTTTCTCTACTGAGAAG CCCGGCCCTGGAAAAGCTACTCTTCTCCCATTGAACGAAGCAGAATTTAGTAAGGGTGAGGTTGGTGAGCTTAGT GTGTTGCCCGATTTCCGGGCGCGAATCCTCCCTGTGTTGGGAACAATGCCTGCAGTGTTTGGCTACACCGTGGCG AATCACGTCATCTGCGATATCTCCGGCTATCCGATGGACTACAGCGTGGGTGGAAAGGGTCGTGACAAGTTGTAC GATGGAGTCTTGGCAGCCTTGCAGGGAACGCTCGAGCGCTTGGCCCGGGCGGAGTATGGACCTAGCCTTGTCGGG CTTCGCCTTCCTATCAGCAAGGATGATGTTGGATATTTGGTCGATGAGATCTTCCGCGGCAAGAGTGTGGTCAGT GGCCTGCCCAGTCGAATCAGTCTCGTTCCCTGGAAGCGCCCTGACAGAGGATTCGGACCTGATCCGGAGTGGATG AAGCAGGGACAGACATTTGTTCCGCTTGAGTTGAAGGATTTAGTGTGTATGACCAAAGATGAAGCTACGCGCCAT GAAAAGGAAGTGCTTCTGGGTGGCAAGAAGCTGGAGGAGGTATACGATGTCAAGACGATTGAAACGGTGCAGAAG CGCCAACAGGAGATGGAGTTTCACGAGCAATATCGCTAA |
Gene | >Ani_SJS100_1|g10541.t1 ATGGCGTCCTGGATCCAACGCCAGGGTGGATCTCATCAGACACAACTTGCAGCTACAGCCGTGATTTCGGGAGCT GCGGTCGCAGGTGCGATCTTTGGCTACCAGGCATTCAGACGAAAGGAAGCAGTACAGCGCCTCAAGGCGTCCATA CCGGATGTTAACAACCAACACCATGCGGAGAAGGTATTCTAGGATCTTCTGATCGTGATATGTTAGATTTGGCTA ATTCATAAGAAGCTCACAGAATACGGTGTCGCGGCTGCAACGCAGCTGAGCAAGGAAGATGAAAGGAGTGCGCTT CTTGCTCGGAGGGCGCAGGAAGGAGACTATGATGATGGTACTGGCTACTTTTTGAGATACTTGCCATTATGCTAA CTCAATCTCTGTATAGAGCTCATCCTCGAACAACTCGCCAGAAACCGTGTCTTTCTATCTGATGAGGGCCTCGCG AGACTCCGCTCGTCATACATAATCGTGGTCGGATGCGGAGGAGTCGGGTCGCATGCCGTTGCATCCCTCGCCCGC TCGGGTGTTTCCAAGATCCGCTTGATCGATTTTGATCAGGTTACGCTTTCCTCATTGAACCGACACGCTCTTGCG ACGCTGGCCGACGTCGGAACGCCGAAGGTACATTGCATTCGCAAGAGACTGGAGCAGATCACACCATGGGTAAAA TTCGACTGCCGGAACGAACTATTCGGGGGATCCGTCGCCGACAATCTTCTTGCGCCCTGGGCTTGGGACGATCAT GATAAAGGACGCAAGCCCGACTATGTGCTCGACTGCATCGACAACATTACGTCCAAGGTGGAGCTTCTTCACTAT TGTCATTCACACTCAATTCCCGTGATTTCGGCAATGGGAGCAGGATGCAAGTCAGATCCTACGCGCGTTACGGTC GGTGATATCTCACTCAGCACGGATGACCCGTTGTCGCGGAGCACTCGTCGGCGCCTGAAGTTGTTGGGAGTGAAT ACAGGCATTCCTGTTGTTTTCTCTACTGAGAAGCCCGGCCCTGGAAAAGCTACTCTTCTCCCATTGAACGAAGCA GAATTTAGTAAGGGTGAGGTTGGTGAGCTTAGTGTGTTGCCCGATTTCCGGGCGCGAATCCTCCCTGTGTTGGGA ACAATGCCTGCAGTGTTTGGCTACACCGTGGCGAATCACGTCATCTGCGATATCTCCGGCTATCCGATGGACTAC AGCGTGGGTGGAAAGGGTCGTGACAAGTTGTACGATGGAGTCTTGGCAGCCTTGCAGGGAACGCTCGAGCGCTTG GCCCGGGCGGAGTATGGACCTAGCCTTGTCGGGCTTCGCCTTCCTATCAGCAAGGATGATGTTGGATATTTGGTC GATGAGATCTTCCGCGGCAAGAGTGTGGTCAGTGGCCTGCCCAGTCGAATCAGTCTCGTTCCCTGGAAGCGCCCT GACAGAGGATTCGGACCTGATCCGGAGTGGATGAAGCAGGGACAGACATTTGTTCCGCTTGAGTTGAAGGATTTA GTGTGTATGACCAAAGATGAAGCTACGCGCCATGAAAAGGAAGTGCTTCTGGGTGGCAAGAAGCTGGAGGAGGTA TACGATGTCAAGACGATTGAAACGGTGCAGAAGCGCCAACAGGAGATGGAGTTTCACGAGCAATATCGCTAA |