Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1054.t1
Gene name
Locationscaffold_003:716306..718162
Strand+
Gene length (bp)1856
Transcript length (bp)1677
Coding sequence length (bp)1677
Protein length (aa) 559

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00295 Glyco_hydro_28 Glycosyl hydrolases family 28 2.2E-28 145 369

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0004650 polygalacturonase activity Yes
GO:0003824 catalytic activity No
GO:0016787 hydrolase activity No
GO:0008150 biological_process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0071704 organic substance metabolic process No
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds No
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1054.t1
MLLDKLSVLSFLGLAPIFAAAQLSGSVGPLTSASTKAATKTCNVLDYGAKADKSTDLGAPLASAFADCKSGGLVY
VPSGDYALSTWARLSGGEAWALQIDGIIYRTGTDGGNMIYIEHSSDFELFSSTSEGAMQGLGYEFHADDNWSGPR
LLRLYEVTDFSVHDFILVDSPSFHFSLDTCTNGEIYNMAIRGGNHGGLDGIDVWSNNIWVHDVEVTNKDECVTVK
SPSKNILIESIYCNWSGGCGMGSFGSDTNVSDITYRNIYTWSSNNMMLIKSNGGSGFVENVLLENFIGHGNAYSL
DIDSYWASMSAVDGDGVQLSNITVKNWKGTEAYGAERGPVKVVCADGAPCYDITIEDFAMWTEEGDSQWYSCESA
YGSGYCLQDSDDHVSYSVTTSTVSSAPSGYSATSMAADLTTDFGSTVSIPIPTIPTSFYPGATPYSALMANSAST
AAASSIASHATVHSSSASVAASVPSAVAPSESIPAATSAVVSSAAAIAPSPAVGAQEGSTTSAPSFAAPSGAGNS
PQGPTGASGFGEKGQQGEQGEQGEQGEQGVCYV*
Coding >Ani_SJS100_1|g1054.t1
ATGCTTCTCGACAAGCTCTCTGTTCTCTCTTTCCTGGGCCTGGCGCCCATCTTTGCTGCTGCGCAGCTCTCCGGT
TCCGTGGGACCGCTGACATCCGCGTCCACCAAGGCAGCTACCAAGACTTGCAACGTTTTGGACTACGGTGCTAAG
GCGGATAAGTCTACTGATCTGGGCGCGCCGTTGGCATCTGCCTTCGCTGACTGCAAGTCTGGCGGTCTCGTCTAT
GTCCCCTCTGGTGACTATGCTCTCTCCACTTGGGCGAGGTTGAGCGGTGGTGAGGCATGGGCTCTGCAGATCGAT
GGAATCATCTACCGTACTGGCACGGACGGCGGCAACATGATCTATATCGAGCACTCTAGCGACTTCGAACTTTTC
AGTAGCACCTCCGAAGGTGCCATGCAGGGTCTGGGCTACGAGTTCCATGCCGATGATAACTGGAGCGGCCCTCGT
CTGCTGCGACTCTATGAAGTTACTGACTTCTCGGTCCACGATTTCATCCTGGTTGACTCTCCCTCTTTCCACTTC
TCTCTCGACACTTGCACCAATGGCGAAATCTACAACATGGCAATCCGCGGCGGTAACCATGGTGGTCTGGATGGT
ATTGATGTCTGGAGTAACAACATCTGGGTCCACGATGTCGAGGTGACGAACAAGGACGAGTGTGTCACAGTCAAG
AGCCCATCGAAGAACATCCTCATTGAGAGCATCTACTGCAACTGGAGTGGTGGCTGTGGTATGGGCTCGTTTGGC
TCTGATACCAATGTTAGCGACATCACTTACCGCAACATCTACACCTGGAGCTCGAACAACATGATGTTGATCAAG
AGCAACGGAGGTAGCGGCTTCGTCGAGAATGTCCTCCTCGAGAACTTCATTGGACACGGCAACGCTTACTCTCTG
GATATCGACAGCTACTGGGCCAGTATGAGCGCGGTGGACGGCGATGGTGTCCAGCTGAGCAACATCACCGTGAAG
AACTGGAAGGGAACCGAAGCTTACGGTGCTGAGCGTGGTCCTGTCAAGGTGGTCTGTGCTGATGGTGCCCCTTGC
TACGACATTACCATTGAGGACTTCGCCATGTGGACCGAGGAGGGTGATAGTCAGTGGTACTCTTGTGAGAGTGCT
TATGGCAGCGGATACTGCCTTCAGGACAGCGATGACCACGTCTCTTACTCGGTCACCACTTCTACAGTCAGCTCC
GCTCCCTCGGGCTACTCTGCGACCTCCATGGCCGCCGATCTGACCACTGACTTCGGCTCTACTGTCTCTATCCCC
ATCCCGACCATCCCTACCTCTTTCTACCCGGGTGCCACCCCCTACAGTGCTCTGATGGCCAACAGCGCTTCTACT
GCCGCTGCTTCTTCCATTGCCAGCCATGCCACTGTCCATAGCAGCAGCGCTTCCGTTGCTGCTTCTGTGCCCAGC
GCTGTCGCCCCTAGCGAGAGCATCCCCGCCGCCACTTCCGCCGTGGTATCCAGCGCTGCTGCCATTGCCCCCAGC
CCCGCTGTGGGTGCCCAGGAGGGGTCTACCACCTCCGCTCCCAGCTTTGCTGCCCCCAGTGGTGCTGGAAACTCT
CCCCAGGGTCCCACCGGAGCTTCTGGATTCGGCGAAAAGGGCCAGCAGGGTGAGCAGGGTGAACAGGGCGAACAG
GGCGAGCAGGGTGTCTGCTACGTGTAA
Transcript >Ani_SJS100_1|g1054.t1
ATGCTTCTCGACAAGCTCTCTGTTCTCTCTTTCCTGGGCCTGGCGCCCATCTTTGCTGCTGCGCAGCTCTCCGGT
TCCGTGGGACCGCTGACATCCGCGTCCACCAAGGCAGCTACCAAGACTTGCAACGTTTTGGACTACGGTGCTAAG
GCGGATAAGTCTACTGATCTGGGCGCGCCGTTGGCATCTGCCTTCGCTGACTGCAAGTCTGGCGGTCTCGTCTAT
GTCCCCTCTGGTGACTATGCTCTCTCCACTTGGGCGAGGTTGAGCGGTGGTGAGGCATGGGCTCTGCAGATCGAT
GGAATCATCTACCGTACTGGCACGGACGGCGGCAACATGATCTATATCGAGCACTCTAGCGACTTCGAACTTTTC
AGTAGCACCTCCGAAGGTGCCATGCAGGGTCTGGGCTACGAGTTCCATGCCGATGATAACTGGAGCGGCCCTCGT
CTGCTGCGACTCTATGAAGTTACTGACTTCTCGGTCCACGATTTCATCCTGGTTGACTCTCCCTCTTTCCACTTC
TCTCTCGACACTTGCACCAATGGCGAAATCTACAACATGGCAATCCGCGGCGGTAACCATGGTGGTCTGGATGGT
ATTGATGTCTGGAGTAACAACATCTGGGTCCACGATGTCGAGGTGACGAACAAGGACGAGTGTGTCACAGTCAAG
AGCCCATCGAAGAACATCCTCATTGAGAGCATCTACTGCAACTGGAGTGGTGGCTGTGGTATGGGCTCGTTTGGC
TCTGATACCAATGTTAGCGACATCACTTACCGCAACATCTACACCTGGAGCTCGAACAACATGATGTTGATCAAG
AGCAACGGAGGTAGCGGCTTCGTCGAGAATGTCCTCCTCGAGAACTTCATTGGACACGGCAACGCTTACTCTCTG
GATATCGACAGCTACTGGGCCAGTATGAGCGCGGTGGACGGCGATGGTGTCCAGCTGAGCAACATCACCGTGAAG
AACTGGAAGGGAACCGAAGCTTACGGTGCTGAGCGTGGTCCTGTCAAGGTGGTCTGTGCTGATGGTGCCCCTTGC
TACGACATTACCATTGAGGACTTCGCCATGTGGACCGAGGAGGGTGATAGTCAGTGGTACTCTTGTGAGAGTGCT
TATGGCAGCGGATACTGCCTTCAGGACAGCGATGACCACGTCTCTTACTCGGTCACCACTTCTACAGTCAGCTCC
GCTCCCTCGGGCTACTCTGCGACCTCCATGGCCGCCGATCTGACCACTGACTTCGGCTCTACTGTCTCTATCCCC
ATCCCGACCATCCCTACCTCTTTCTACCCGGGTGCCACCCCCTACAGTGCTCTGATGGCCAACAGCGCTTCTACT
GCCGCTGCTTCTTCCATTGCCAGCCATGCCACTGTCCATAGCAGCAGCGCTTCCGTTGCTGCTTCTGTGCCCAGC
GCTGTCGCCCCTAGCGAGAGCATCCCCGCCGCCACTTCCGCCGTGGTATCCAGCGCTGCTGCCATTGCCCCCAGC
CCCGCTGTGGGTGCCCAGGAGGGGTCTACCACCTCCGCTCCCAGCTTTGCTGCCCCCAGTGGTGCTGGAAACTCT
CCCCAGGGTCCCACCGGAGCTTCTGGATTCGGCGAAAAGGGCCAGCAGGGTGAGCAGGGTGAACAGGGCGAACAG
GGCGAGCAGGGTGTCTGCTACGTGTAA
Gene >Ani_SJS100_1|g1054.t1
ATGCTTCTCGACAAGCTCTCTGTTCTCTCTTTCCTGGGCCTGGCGCCCATCTTTGCTGCTGCGCAGCTCTCCGGT
TCCGTGGGACCGCTGACATCCGCGTCCACCAAGGCAGCTACCAAGACTTGCAACGTTTTGGACTACGGTGCTAAG
GCGGATAAGTCTACTGATCTGGGCGCGCCGTTGGCATCTGCCTTCGCTGACTGCAAGTCTGGCGGTCTCGTCTAT
GTCCCCTCTGGTGACTATGCTCTCTCCACTTGGGCGAGGTTGAGCGGTGGTGAGGCATGGGCTCTGCAGATCGAT
GGAATCATCTACCGTACTGGCACGGACGGCGGCAACATGATCTATATCGAGCACTCTAGCGACTTCGAACTTTTC
AGTAGCACCTCCGAAGGTGCCATGCAGGGTCTGGGCTACGAGTTCCATGCCGATGATAACTGGAGCGGCCCTCGT
CTGCTGCGACTCTATGAAGTTACTGACTTCTCGGTCCACGATTTCATCCTGGTTGACTCTCCCTCTTTCCACTTC
TCTCTCGACACTTGCACCAATGGCGAAATCTACAACATGGCAATCCGCGGCGGTAACCATGGTGGTCTGGATGGT
ATTGATGTCTGGAGTAACAACATCTGGGTCCACGATGTGAGTACCGAAGAGCATAACGTTTCCATACAGGTTATT
AATTAGTCCGATAGGTCGAGGTGACGAACAAGGACGAGTGTGTCACAGTCAAGGTAAGACCCTGATGAGTGCCCG
AGCAGGAAGCTTCAGGCTAACAATCAATAATAGAGCCCATCGAAGAACATCCTCATTGAGAGCATCTACTGCAAC
TGGAGTGGTGGCTGTGGTATGGGCTCGTTTGGCTCTGATACCAATGTTAGCGACATCACTTACCGCAACATCTAC
ACCTGGAGCTCGAACAACATGATGTTGATCAAGAGCAACGGAGGTAGCGGCTTCGTCGAGAATGTCCTCCTCGAG
AACTTCATTGGTGAGTGATATCTTATGCAAAATTATTGGTCTTGACGGGACTAACCGAGGACTCTTTCTGTTGGT
AAACAGGACACGGCAACGCTTACTCTCTGGATATCGACAGCTACTGGGCCAGTATGAGCGCGGTGGACGGCGATG
GTGTCCAGCTGAGCAACATCACCGTGAAGAACTGGAAGGGAACCGAAGCTTACGGTGCTGAGCGTGGTCCTGTCA
AGGTGGTCTGTGCTGATGGTGCCCCTTGCTACGACATTACCATTGAGGACTTCGCCATGTGGACCGAGGAGGGTG
ATAGTCAGTGGTACTCTTGTGAGAGTGCTTATGGCAGCGGATACTGCCTTCAGGACAGCGATGACCACGTCTCTT
ACTCGGTCACCACTTCTACAGTCAGCTCCGCTCCCTCGGGCTACTCTGCGACCTCCATGGCCGCCGATCTGACCA
CTGACTTCGGCTCTACTGTCTCTATCCCCATCCCGACCATCCCTACCTCTTTCTACCCGGGTGCCACCCCCTACA
GTGCTCTGATGGCCAACAGCGCTTCTACTGCCGCTGCTTCTTCCATTGCCAGCCATGCCACTGTCCATAGCAGCA
GCGCTTCCGTTGCTGCTTCTGTGCCCAGCGCTGTCGCCCCTAGCGAGAGCATCCCCGCCGCCACTTCCGCCGTGG
TATCCAGCGCTGCTGCCATTGCCCCCAGCCCCGCTGTGGGTGCCCAGGAGGGGTCTACCACCTCCGCTCCCAGCT
TTGCTGCCCCCAGTGGTGCTGGAAACTCTCCCCAGGGTCCCACCGGAGCTTCTGGATTCGGCGAAAAGGGCCAGC
AGGGTGAGCAGGGTGAACAGGGCGAACAGGGCGAGCAGGGTGTCTGCTACGTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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