Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g10536.t1
Gene name
Location	scaffold_120:76948..77923
Strand	+
Gene length (bp)	975
Transcript length (bp)	975
Coding sequence length (bp)	975
Protein length (aa)	325

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00505	HMG_box	HMG (high mobility group) box	9.0E-11	87	155

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 58	0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
HMG

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g10536.t1 MDKTDADQTKPEPWCQDNRVRRSNRAVAMTRNGQVEHATLKLNLDLPCPLSELANGTPHIPVRDMCAWVDRPVEP RHQEALQRHGKIPRPMNSFMLYRLAYSDRAKYWLAHDDHQAISILTGRSWKMEPPHIRKQYKTLAVMEKQKHAEA HPEYRFSPSKKKKRSRTARARSQELVLRSEAFPKVSRSSQPHAWSNLLNNDRVSGPSTEPFLAEEETLLKSIPSN PDSFGPLQSATSVWWQGTTYSQMASAEQNSTGTQPYFPVVTGQPGIPDSACFVPQSGSTGLEAVNGQSALLPLSV SKETCKVDEELLMEGTQRVATVGQ*
Coding	>Ani_SJS100_1\|g10536.t1 ATGGATAAGACCGATGCGGACCAGACAAAGCCAGAGCCTTGGTGTCAGGACAACAGAGTCCGACGGTCGAATCGC GCCGTAGCTATGACAAGGAACGGCCAAGTCGAGCACGCAACGTTGAAGCTCAATCTAGACCTGCCATGCCCACTC AGCGAATTGGCCAACGGCACGCCGCACATCCCGGTTAGAGACATGTGCGCCTGGGTCGACCGCCCGGTCGAGCCA CGCCACCAGGAGGCTCTACAACGGCATGGCAAGATTCCACGTCCGATGAACTCATTCATGCTGTACCGGCTGGCG TACAGTGATCGAGCAAAGTACTGGCTCGCCCACGATGATCATCAGGCCATCTCCATCCTCACCGGACGGAGCTGG AAGATGGAACCCCCCCACATCCGTAAGCAGTACAAGACGCTCGCGGTGATGGAGAAACAAAAGCATGCTGAAGCG CACCCGGAGTATCGGTTCTCGCCGTCAAAAAAGAAGAAACGATCGCGGACTGCAAGAGCCCGTTCTCAGGAATTG GTGTTGCGTTCGGAGGCGTTCCCCAAAGTCAGCCGAAGTTCTCAGCCTCATGCTTGGTCTAATTTGTTGAACAAT GACCGCGTCAGTGGACCCTCCACAGAACCATTCCTTGCTGAAGAGGAAACTCTCCTCAAAAGCATTCCATCGAAT CCAGATAGTTTTGGACCATTGCAAAGTGCCACCTCGGTGTGGTGGCAGGGGACAACCTACTCTCAGATGGCCTCT GCTGAGCAAAATTCCACGGGCACTCAGCCTTATTTTCCTGTCGTCACGGGCCAGCCGGGGATACCGGACTCTGCT TGCTTCGTTCCCCAGTCTGGATCCACTGGACTCGAAGCTGTCAATGGACAGTCTGCTTTACTGCCACTGTCTGTT TCGAAAGAGACTTGTAAGGTTGACGAAGAATTGCTTATGGAAGGGACGCAGCGGGTTGCAACTGTAGGCCAGTAA
Transcript	>Ani_SJS100_1\|g10536.t1 ATGGATAAGACCGATGCGGACCAGACAAAGCCAGAGCCTTGGTGTCAGGACAACAGAGTCCGACGGTCGAATCGC GCCGTAGCTATGACAAGGAACGGCCAAGTCGAGCACGCAACGTTGAAGCTCAATCTAGACCTGCCATGCCCACTC AGCGAATTGGCCAACGGCACGCCGCACATCCCGGTTAGAGACATGTGCGCCTGGGTCGACCGCCCGGTCGAGCCA CGCCACCAGGAGGCTCTACAACGGCATGGCAAGATTCCACGTCCGATGAACTCATTCATGCTGTACCGGCTGGCG TACAGTGATCGAGCAAAGTACTGGCTCGCCCACGATGATCATCAGGCCATCTCCATCCTCACCGGACGGAGCTGG AAGATGGAACCCCCCCACATCCGTAAGCAGTACAAGACGCTCGCGGTGATGGAGAAACAAAAGCATGCTGAAGCG CACCCGGAGTATCGGTTCTCGCCGTCAAAAAAGAAGAAACGATCGCGGACTGCAAGAGCCCGTTCTCAGGAATTG GTGTTGCGTTCGGAGGCGTTCCCCAAAGTCAGCCGAAGTTCTCAGCCTCATGCTTGGTCTAATTTGTTGAACAAT GACCGCGTCAGTGGACCCTCCACAGAACCATTCCTTGCTGAAGAGGAAACTCTCCTCAAAAGCATTCCATCGAAT CCAGATAGTTTTGGACCATTGCAAAGTGCCACCTCGGTGTGGTGGCAGGGGACAACCTACTCTCAGATGGCCTCT GCTGAGCAAAATTCCACGGGCACTCAGCCTTATTTTCCTGTCGTCACGGGCCAGCCGGGGATACCGGACTCTGCT TGCTTCGTTCCCCAGTCTGGATCCACTGGACTCGAAGCTGTCAATGGACAGTCTGCTTTACTGCCACTGTCTGTT TCGAAAGAGACTTGTAAGGTTGACGAAGAATTGCTTATGGAAGGGACGCAGCGGGTTGCAACTGTAGGCCAGTAA
Gene	>Ani_SJS100_1\|g10536.t1 ATGGATAAGACCGATGCGGACCAGACAAAGCCAGAGCCTTGGTGTCAGGACAACAGAGTCCGACGGTCGAATCGC GCCGTAGCTATGACAAGGAACGGCCAAGTCGAGCACGCAACGTTGAAGCTCAATCTAGACCTGCCATGCCCACTC AGCGAATTGGCCAACGGCACGCCGCACATCCCGGTTAGAGACATGTGCGCCTGGGTCGACCGCCCGGTCGAGCCA CGCCACCAGGAGGCTCTACAACGGCATGGCAAGATTCCACGTCCGATGAACTCATTCATGCTGTACCGGCTGGCG TACAGTGATCGAGCAAAGTACTGGCTCGCCCACGATGATCATCAGGCCATCTCCATCCTCACCGGACGGAGCTGG AAGATGGAACCCCCCCACATCCGTAAGCAGTACAAGACGCTCGCGGTGATGGAGAAACAAAAGCATGCTGAAGCG CACCCGGAGTATCGGTTCTCGCCGTCAAAAAAGAAGAAACGATCGCGGACTGCAAGAGCCCGTTCTCAGGAATTG GTGTTGCGTTCGGAGGCGTTCCCCAAAGTCAGCCGAAGTTCTCAGCCTCATGCTTGGTCTAATTTGTTGAACAAT GACCGCGTCAGTGGACCCTCCACAGAACCATTCCTTGCTGAAGAGGAAACTCTCCTCAAAAGCATTCCATCGAAT CCAGATAGTTTTGGACCATTGCAAAGTGCCACCTCGGTGTGGTGGCAGGGGACAACCTACTCTCAGATGGCCTCT GCTGAGCAAAATTCCACGGGCACTCAGCCTTATTTTCCTGTCGTCACGGGCCAGCCGGGGATACCGGACTCTGCT TGCTTCGTTCCCCAGTCTGGATCCACTGGACTCGAAGCTGTCAATGGACAGTCTGCTTTACTGCCACTGTCTGTT TCGAAAGAGACTTGTAAGGTTGACGAAGAATTGCTTATGGAAGGGACGCAGCGGGTTGCAACTGTAGGCCAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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