Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g10535.t1
Gene name
Locationscaffold_120:58911..60281
Strand-
Gene length (bp)1370
Transcript length (bp)1092
Coding sequence length (bp)1092
Protein length (aa) 364

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 50 72 22
3 92 114 22
4 124 141 17
5 206 228 22
6 238 260 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g10535.t1
MTVSHPKDVLNTVNFVTQCLCIPIISVFVLLRFSVRIYYKQLVGVEDWSCLIAWVLFMGYCGIAIAVGHYGGGYH
IDDVSAAHQILFRKFCYVATVLYCLMALFVKITLLFILIRIFSPYRSKILFIYVLLGCLCIYYIVAEVVKTRICD
PVPSYCTLDPKASCLNQQAALIADSVISVVTDFIILVLPLPLTWSLQMSRTKKLRVIGMLSAGGLATAFSLYRLV
LVLREGSSRDQTIVFLIVILSGNAEGGVAMICACLPTINILINKLRKKECSSQRYYAPESSVNLDKLKGGSMRYS
LGNFQYADGTESVSDQSHLITLAGMVDMAGGGDWGIHKTVDVSQTVVVVDGGNNENHHHISFH*
Coding >Ani_SJS100_1|g10535.t1
ATGACCGTCAGCCATCCCAAGGATGTTTTGAACACCGTCAATTTTGTCACACAATGTTTGTGTATTCCGATCATT
AGCGTATTCGTCCTCTTGCGGTTCTCCGTCCGCATCTACTACAAGCAGCTTGTAGGCGTCGAAGACTGGTCCTGC
CTGATAGCATGGGTGCTGTTCATGGGATATTGTGGGATTGCTATTGCCGTCGGTCACTATGGCGGAGGCTACCAC
ATCGATGATGTCTCTGCAGCACACCAGATACTCTTTCGCAAGTTCTGTTACGTCGCCACCGTTCTCTACTGCCTC
ATGGCCCTCTTCGTCAAGATCACGCTACTGTTCATCCTCATCCGTATCTTCAGTCCTTATCGTTCCAAGATCCTC
TTTATCTACGTCCTCCTGGGCTGCCTGTGCATATACTACATTGTCGCCGAGGTCGTTAAGACCCGCATCTGTGAC
CCCGTCCCAAGCTACTGTACGCTCGATCCTAAGGCGTCCTGCCTCAACCAACAGGCTGCGCTGATTGCAGACTCG
GTCATCAGTGTGGTGACGGACTTCATCATTCTGGTTTTGCCTCTGCCACTCACCTGGTCGTTGCAAATGTCTCGA
ACTAAGAAATTGCGGGTTATTGGCATGCTGTCGGCGGGTGGCCTGGCCACGGCGTTCAGTCTATACCGATTGGTT
CTAGTCTTGCGTGAGGGTAGTTCCAGGGACCAGACGATTGTCTTTCTAATCGTGATTTTGTCAGGAAACGCCGAA
GGAGGCGTGGCTATGATCTGCGCTTGTCTGCCCACCATCAACATTCTTATCAACAAGCTTCGCAAAAAGGAGTGC
AGCTCTCAGCGCTATTACGCACCGGAGTCATCCGTTAATCTGGATAAGCTCAAAGGTGGCAGCATGCGATACTCG
CTTGGGAATTTCCAATATGCCGATGGCACTGAGTCCGTCTCGGACCAGTCACATCTGATTACTCTTGCCGGAATG
GTTGATATGGCGGGTGGCGGTGACTGGGGGATTCACAAAACGGTGGATGTGTCCCAGACGGTGGTGGTAGTTGAC
GGTGGTAATAATGAGAATCACCATCACATCAGTTTTCACTGA
Transcript >Ani_SJS100_1|g10535.t1
ATGACCGTCAGCCATCCCAAGGATGTTTTGAACACCGTCAATTTTGTCACACAATGTTTGTGTATTCCGATCATT
AGCGTATTCGTCCTCTTGCGGTTCTCCGTCCGCATCTACTACAAGCAGCTTGTAGGCGTCGAAGACTGGTCCTGC
CTGATAGCATGGGTGCTGTTCATGGGATATTGTGGGATTGCTATTGCCGTCGGTCACTATGGCGGAGGCTACCAC
ATCGATGATGTCTCTGCAGCACACCAGATACTCTTTCGCAAGTTCTGTTACGTCGCCACCGTTCTCTACTGCCTC
ATGGCCCTCTTCGTCAAGATCACGCTACTGTTCATCCTCATCCGTATCTTCAGTCCTTATCGTTCCAAGATCCTC
TTTATCTACGTCCTCCTGGGCTGCCTGTGCATATACTACATTGTCGCCGAGGTCGTTAAGACCCGCATCTGTGAC
CCCGTCCCAAGCTACTGTACGCTCGATCCTAAGGCGTCCTGCCTCAACCAACAGGCTGCGCTGATTGCAGACTCG
GTCATCAGTGTGGTGACGGACTTCATCATTCTGGTTTTGCCTCTGCCACTCACCTGGTCGTTGCAAATGTCTCGA
ACTAAGAAATTGCGGGTTATTGGCATGCTGTCGGCGGGTGGCCTGGCCACGGCGTTCAGTCTATACCGATTGGTT
CTAGTCTTGCGTGAGGGTAGTTCCAGGGACCAGACGATTGTCTTTCTAATCGTGATTTTGTCAGGAAACGCCGAA
GGAGGCGTGGCTATGATCTGCGCTTGTCTGCCCACCATCAACATTCTTATCAACAAGCTTCGCAAAAAGGAGTGC
AGCTCTCAGCGCTATTACGCACCGGAGTCATCCGTTAATCTGGATAAGCTCAAAGGTGGCAGCATGCGATACTCG
CTTGGGAATTTCCAATATGCCGATGGCACTGAGTCCGTCTCGGACCAGTCACATCTGATTACTCTTGCCGGAATG
GTTGATATGGCGGGTGGCGGTGACTGGGGGATTCACAAAACGGTGGATGTGTCCCAGACGGTGGTGGTAGTTGAC
GGTGGTAATAATGAGAATCACCATCACATCAGTTTTCACTGA
Gene >Ani_SJS100_1|g10535.t1
ATGACCGTCAGCCATCCCAAGGATGTTTTGAACACCGTCAATTTTGTCACACAATGTTTGTGTATTCCGATCATT
AGCGTATTCGTCCTCTTGCGGTTCTCCGTCCGCATCTACTACAAGCAGCTTGTAGGCGTCGAAGACTGTACGTCT
GCCTTTTATCTTCCTGCGTAGGATTTTATATTAACTTCTTCAGGGTCCTGCCTGATAGCATGGGTGCGTCGAGGA
TGCAGATGTTTTATCAGTACAGCGAACTGACTATGACAGGTGCTGTTCATGGGATATTGTGGGATTGCTATTGCC
GGTACGCTTCATTCATTCATTCCCCACAACTCTCGGCTAATTCTAGAATGCGTAGTCGGTCACTATGGCGGAGGC
TACCACATCGATGATGTCTCTGCAGCACACCAGATACTCTTTCGCAAGGTATAGACGTTCCACCATCGAACCAGC
ACCATATCTACGTGAGCTAATAGCAGATTGAGCCAGTTCTGTTACGTCGCCACCGTTCTCTACTGCCTCATGGCC
CTCTTCGTCAAGATCACGCTACTGTTCATCCTCATCCGTATCTTCAGTCCTTATCGTTCCAAGATCCTCTTTATC
TACGTCCTCCTGGGCTGCCTGTGCATATACTACATTGTCGCCGAGGTCGTTAAGACCCGCATCTGTGACCCCGTC
CCAAGCTACTGTACGCTCGATCCTAAGGCGTCCTGCCTCAACCAACAGGCTGCGCTGATTGCAGACTCGGTCATC
AGTGTGGTGACGGACTTCATCATTCTGGTTTTGCCTCTGCCACTCACCTGGTCGTTGCAAATGTCTCGAACTAAG
AAATTGCGGGTTATTGGCATGCTGTCGGCGGGTGGCCTGGCCACGGCGTTCAGTCTATACCGATTGGTTCTAGTC
TTGCGTGAGGGTAGTTCCAGGGACCAGACGATTGTCTTTCTAATCGTGATTTTGTCAGGGTAAGTTCTGAGCCAT
GCCGTTGTTGTTTTATCAATGCCTCGGGCTAATTACGGTTCAGAAACGCCGAAGGAGGCGTGGCTATGATCTGCG
CTTGTCTGCCCACCATCAACATTCTTATCAACAAGCTTCGCAAAAAGGAGTGCAGCTCTCAGCGCTATTACGCAC
CGGAGTCATCCGTTAATCTGGATAAGCTCAAAGGTGGCAGCATGCGATACTCGCTTGGGAATTTCCAATATGCCG
ATGGCACTGAGTCCGTCTCGGACCAGTCACATCTGATTACTCTTGCCGGAATGGTTGATATGGCGGGTGGCGGTG
ACTGGGGGATTCACAAAACGGTGGATGTGTCCCAGACGGTGGTGGTAGTTGACGGTGGTAATAATGAGAATCACC
ATCACATCAGTTTTCACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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