© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10529.t1 |
| Gene name | |
| Location | scaffold_120:23783..25163 |
| Strand | - |
| Gene length (bp) | 1380 |
| Transcript length (bp) | 1380 |
| Coding sequence length (bp) | 1380 |
| Protein length (aa) | 460 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02537 | CRCB | CrcB-like protein, Camphor Resistance (CrcB) | 6.2E-13 | 98 | 210 |
| PF02537 | CRCB | CrcB-like protein, Camphor Resistance (CrcB) | 6.1E-22 | 327 | 441 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0005575 | cellular_component | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0031224 | intrinsic component of membrane | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 60 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 93 | 112 | 19 |
| 2 | 122 | 141 | 19 |
| 3 | 178 | 200 | 22 |
| 4 | 240 | 262 | 22 |
| 5 | 287 | 306 | 19 |
| 6 | 321 | 343 | 22 |
| 7 | 350 | 372 | 22 |
| 8 | 392 | 414 | 22 |
| 9 | 426 | 448 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10529.t1 MRPVGSQDSRPGASQAPQDGGNLNEVAAPPPVYDPSEKSLRLNDYLENQPERSSQLRPRGTRDATDDTQSPDEDP QEKHSTRRRISKFMQTEYVVSYLILFSMIGTLLRLVIECLTFYPGTPVNTSVLWANVGGSMVMGFLSEDQELFQF ESVVSSFPGHVRNDPSQRAAHLKAHKKTVPLFIGLTAGFCGSLTSFSTFIRDVYLALANKPAVPSGPYHDVSLFL SGSPGLKSPNGGFSFMAIIAVLFTEIGLSLAGLFLGAHIAIALSQWTPSLPQEWLRKYLDPLTVILAWLSWILVI LLVILLPKHPGAATLWNPSIWRGPILFSLAFAPVGCLARFYVSLKLNGRIVGFPLGTFAVNIGGTMVLGMAYSIQ HAAVSTSRLTIGGITGCQVLQGIMDGFCGCLTTVSTWVLELSDLRRRHAYVYGGVSVAVALCFLVVEIGSLQWTR GLSTPACLR* |
| Coding | >Ani_SJS100_1|g10529.t1 ATGCGACCGGTCGGTTCGCAGGATAGTCGTCCTGGGGCATCCCAGGCGCCTCAGGATGGAGGCAATCTCAATGAA GTCGCTGCCCCTCCTCCTGTTTACGATCCCTCGGAGAAATCGCTACGGCTGAACGACTACCTGGAAAACCAACCC GAACGCAGCTCCCAGCTCCGTCCCCGAGGCACCAGAGATGCAACCGATGATACGCAGAGCCCGGACGAAGATCCC CAAGAAAAACACTCTACACGTAGACGCATCTCGAAGTTCATGCAGACGGAATATGTCGTGTCCTACCTGATTCTA TTTTCGATGATCGGTACTTTGCTCCGATTGGTCATCGAGTGCCTCACGTTTTACCCAGGGACCCCAGTCAACACC AGTGTTCTGTGGGCGAACGTCGGGGGCAGCATGGTTATGGGTTTTCTCAGCGAGGACCAAGAGTTGTTCCAGTTT GAAAGTGTCGTCTCGAGTTTTCCTGGGCATGTTAGAAACGACCCCTCGCAGCGTGCCGCACATCTGAAAGCCCAC AAAAAGACTGTGCCCTTGTTCATCGGGCTTACCGCCGGCTTCTGTGGTAGTCTTACTTCCTTCTCGACCTTCATC CGCGACGTCTATCTAGCACTGGCGAATAAACCAGCGGTCCCAAGCGGGCCCTACCACGATGTCTCTTTGTTCTTA TCGGGTTCTCCCGGGTTGAAATCTCCAAATGGCGGATTCAGCTTCATGGCAATTATCGCTGTTCTCTTCACTGAG ATTGGCCTCTCGTTGGCCGGTCTTTTCCTCGGAGCTCATATTGCTATTGCTCTATCGCAATGGACGCCCAGTTTG CCCCAGGAATGGCTGCGGAAATATTTGGATCCCCTCACCGTCATACTGGCCTGGTTATCGTGGATCCTTGTCATC CTGCTCGTTATCCTCCTCCCCAAACACCCCGGAGCAGCCACACTATGGAATCCAAGTATATGGCGCGGGCCAATT CTCTTCTCCCTAGCATTCGCACCAGTAGGATGCCTAGCCCGCTTCTATGTCTCCCTCAAACTCAACGGTCGGATT GTGGGGTTCCCACTGGGAACATTTGCAGTTAATATAGGAGGCACCATGGTGCTTGGAATGGCATATTCCATACAA CATGCTGCAGTGAGCACCTCACGACTAACTATAGGAGGCATTACCGGTTGTCAGGTCTTACAAGGTATCATGGAC GGTTTTTGCGGGTGCCTGACAACAGTCAGTACCTGGGTTCTGGAACTGTCCGATTTGCGCCGCCGACACGCTTAT GTTTACGGGGGTGTCAGTGTGGCAGTTGCCTTGTGCTTCCTGGTCGTGGAAATCGGGAGCTTACAGTGGACTCGT GGTCTCTCTACACCTGCATGTTTACGGTGA |
| Transcript | >Ani_SJS100_1|g10529.t1 ATGCGACCGGTCGGTTCGCAGGATAGTCGTCCTGGGGCATCCCAGGCGCCTCAGGATGGAGGCAATCTCAATGAA GTCGCTGCCCCTCCTCCTGTTTACGATCCCTCGGAGAAATCGCTACGGCTGAACGACTACCTGGAAAACCAACCC GAACGCAGCTCCCAGCTCCGTCCCCGAGGCACCAGAGATGCAACCGATGATACGCAGAGCCCGGACGAAGATCCC CAAGAAAAACACTCTACACGTAGACGCATCTCGAAGTTCATGCAGACGGAATATGTCGTGTCCTACCTGATTCTA TTTTCGATGATCGGTACTTTGCTCCGATTGGTCATCGAGTGCCTCACGTTTTACCCAGGGACCCCAGTCAACACC AGTGTTCTGTGGGCGAACGTCGGGGGCAGCATGGTTATGGGTTTTCTCAGCGAGGACCAAGAGTTGTTCCAGTTT GAAAGTGTCGTCTCGAGTTTTCCTGGGCATGTTAGAAACGACCCCTCGCAGCGTGCCGCACATCTGAAAGCCCAC AAAAAGACTGTGCCCTTGTTCATCGGGCTTACCGCCGGCTTCTGTGGTAGTCTTACTTCCTTCTCGACCTTCATC CGCGACGTCTATCTAGCACTGGCGAATAAACCAGCGGTCCCAAGCGGGCCCTACCACGATGTCTCTTTGTTCTTA TCGGGTTCTCCCGGGTTGAAATCTCCAAATGGCGGATTCAGCTTCATGGCAATTATCGCTGTTCTCTTCACTGAG ATTGGCCTCTCGTTGGCCGGTCTTTTCCTCGGAGCTCATATTGCTATTGCTCTATCGCAATGGACGCCCAGTTTG CCCCAGGAATGGCTGCGGAAATATTTGGATCCCCTCACCGTCATACTGGCCTGGTTATCGTGGATCCTTGTCATC CTGCTCGTTATCCTCCTCCCCAAACACCCCGGAGCAGCCACACTATGGAATCCAAGTATATGGCGCGGGCCAATT CTCTTCTCCCTAGCATTCGCACCAGTAGGATGCCTAGCCCGCTTCTATGTCTCCCTCAAACTCAACGGTCGGATT GTGGGGTTCCCACTGGGAACATTTGCAGTTAATATAGGAGGCACCATGGTGCTTGGAATGGCATATTCCATACAA CATGCTGCAGTGAGCACCTCACGACTAACTATAGGAGGCATTACCGGTTGTCAGGTCTTACAAGGTATCATGGAC GGTTTTTGCGGGTGCCTGACAACAGTCAGTACCTGGGTTCTGGAACTGTCCGATTTGCGCCGCCGACACGCTTAT GTTTACGGGGGTGTCAGTGTGGCAGTTGCCTTGTGCTTCCTGGTCGTGGAAATCGGGAGCTTACAGTGGACTCGT GGTCTCTCTACACCTGCATGTTTACGGTGA |
| Gene | >Ani_SJS100_1|g10529.t1 ATGCGACCGGTCGGTTCGCAGGATAGTCGTCCTGGGGCATCCCAGGCGCCTCAGGATGGAGGCAATCTCAATGAA GTCGCTGCCCCTCCTCCTGTTTACGATCCCTCGGAGAAATCGCTACGGCTGAACGACTACCTGGAAAACCAACCC GAACGCAGCTCCCAGCTCCGTCCCCGAGGCACCAGAGATGCAACCGATGATACGCAGAGCCCGGACGAAGATCCC CAAGAAAAACACTCTACACGTAGACGCATCTCGAAGTTCATGCAGACGGAATATGTCGTGTCCTACCTGATTCTA TTTTCGATGATCGGTACTTTGCTCCGATTGGTCATCGAGTGCCTCACGTTTTACCCAGGGACCCCAGTCAACACC AGTGTTCTGTGGGCGAACGTCGGGGGCAGCATGGTTATGGGTTTTCTCAGCGAGGACCAAGAGTTGTTCCAGTTT GAAAGTGTCGTCTCGAGTTTTCCTGGGCATGTTAGAAACGACCCCTCGCAGCGTGCCGCACATCTGAAAGCCCAC AAAAAGACTGTGCCCTTGTTCATCGGGCTTACCGCCGGCTTCTGTGGTAGTCTTACTTCCTTCTCGACCTTCATC CGCGACGTCTATCTAGCACTGGCGAATAAACCAGCGGTCCCAAGCGGGCCCTACCACGATGTCTCTTTGTTCTTA TCGGGTTCTCCCGGGTTGAAATCTCCAAATGGCGGATTCAGCTTCATGGCAATTATCGCTGTTCTCTTCACTGAG ATTGGCCTCTCGTTGGCCGGTCTTTTCCTCGGAGCTCATATTGCTATTGCTCTATCGCAATGGACGCCCAGTTTG CCCCAGGAATGGCTGCGGAAATATTTGGATCCCCTCACCGTCATACTGGCCTGGTTATCGTGGATCCTTGTCATC CTGCTCGTTATCCTCCTCCCCAAACACCCCGGAGCAGCCACACTATGGAATCCAAGTATATGGCGCGGGCCAATT CTCTTCTCCCTAGCATTCGCACCAGTAGGATGCCTAGCCCGCTTCTATGTCTCCCTCAAACTCAACGGTCGGATT GTGGGGTTCCCACTGGGAACATTTGCAGTTAATATAGGAGGCACCATGGTGCTTGGAATGGCATATTCCATACAA CATGCTGCAGTGAGCACCTCACGACTAACTATAGGAGGCATTACCGGTTGTCAGGTCTTACAAGGTATCATGGAC GGTTTTTGCGGGTGCCTGACAACAGTCAGTACCTGGGTTCTGGAACTGTCCGATTTGCGCCGCCGACACGCTTAT GTTTACGGGGGTGTCAGTGTGGCAGTTGCCTTGTGCTTCCTGGTCGTGGAAATCGGGAGCTTACAGTGGACTCGT GGTCTCTCTACACCTGCATGTTTACGGTGA |