Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g10524.t1
Gene name
Locationscaffold_120:12945..15006
Strand-
Gene length (bp)2061
Transcript length (bp)2061
Coding sequence length (bp)2061
Protein length (aa) 687

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00078 RVT_1 Reverse transcriptase (RNA-dependent DNA polymerase) 6.4E-32 404 655
PF14529 Exo_endo_phos_2 Endonuclease-reverse transcriptase 1.4E-24 14 123
PF03372 Exo_endo_phos Endonuclease/Exonuclease/phosphatase family 3.9E-06 23 120

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g10524.t1
MHKAFEASSAHDVLTKIRQTIQRNTEPGNRAVKLILAGDFNRHHPAWSHREVHHRFAAHADELINFFHNLELQWC
LSPGETTFWALNKPGTTSVLDLTLTNDMNRLVKCQLYHDNYGSDHRGTYSEWSLHPEQAKKPKPKRAYSRADWTR
VGQTILREINQYPRIQTNRDLDHAVENLIQTTTAALDRHVPVQAPCPYSKRWFTPELKTQQVEANQARRKWQDGC
ATWGSDHPNTKSMFEIMREKRRKWTRAVEKAKATHWKVFLDKAGEGQIWKAATYMRPRDAYMSIPAIQVSTEEIA
DNQRKAEAFLETFFPKMSEPESEEVSPAEELPWEPITEEEIYRSLRVAKGTTAPGRDGIPTLVWKHLWTFLKGTI
TTIFTRSVDLGYYPRKWKQTRIIVLRKPGKPDYSVPGAYRPISLLNTLGKLLEAVIARRLSYWAEKYKLLPDTQF
GGRPGRNTEQALLVLANAVDRAWVRSRVVTLIAFDLKGAFNGVNKATLDARLRAKGVPSKARLWIYSFMQNREAS
VTLEDFETDSTPLENAALAQGSPLSPILFGFYNSDLVDQPVNSNGGASAFIDDYFRWRTSSSVEENIKKIQEEDI
PRIEQWARRTGASFAAEKTELIHLTRRKPAQGKGEITMNGKVIKPADTAKLLGVIFDTEMRWKEHVQHAVKQATK
RIIALSGLRHL*
Coding >Ani_SJS100_1|g10524.t1
ATGCACAAAGCCTTTGAAGCGAGCAGCGCCCACGATGTCCTAACGAAAATCCGACAAACCATCCAACGAAACACA
GAACCAGGCAATCGCGCCGTCAAATTAATTCTGGCGGGAGATTTCAACCGCCACCACCCGGCATGGAGCCACCGC
GAAGTACATCACCGCTTCGCAGCACATGCGGACGAACTGATCAACTTCTTCCACAACTTGGAGCTGCAATGGTGC
CTGAGCCCCGGCGAAACGACATTCTGGGCACTCAACAAACCGGGCACCACGTCAGTTTTAGACCTTACACTAACC
AACGATATGAACAGGCTGGTCAAGTGCCAACTATATCACGATAATTATGGATCAGACCATAGAGGAACGTACTCC
GAATGGAGTCTCCACCCGGAGCAAGCGAAAAAGCCCAAACCAAAACGAGCCTACAGCCGTGCAGACTGGACTCGC
GTAGGCCAAACCATACTGAGGGAGATAAACCAGTACCCGAGAATCCAGACAAACAGAGATCTAGACCATGCGGTT
GAAAACCTGATTCAAACTACGACAGCAGCTCTGGACCGACACGTACCAGTACAGGCACCATGCCCATACTCAAAA
CGCTGGTTCACTCCCGAACTCAAGACCCAGCAAGTGGAAGCCAACCAAGCCCGAAGAAAGTGGCAAGATGGATGT
GCTACCTGGGGATCTGACCACCCAAATACCAAGTCCATGTTTGAGATAATGCGCGAGAAGAGAAGAAAGTGGACG
AGAGCCGTGGAAAAAGCAAAGGCAACCCACTGGAAAGTGTTCTTGGACAAAGCAGGCGAAGGCCAGATATGGAAA
GCAGCCACCTACATGCGCCCGCGAGACGCCTATATGAGCATCCCAGCAATCCAAGTGAGTACTGAGGAAATTGCT
GATAACCAACGCAAGGCGGAAGCATTTCTTGAAACCTTCTTCCCGAAGATGTCCGAACCGGAAAGTGAAGAAGTC
AGCCCGGCTGAAGAACTACCATGGGAGCCGATCACCGAGGAGGAGATCTACCGATCACTCCGAGTCGCAAAGGGG
ACTACAGCCCCGGGCCGAGACGGAATCCCGACCCTGGTCTGGAAACATCTCTGGACGTTTCTGAAGGGAACTATT
ACTACTATCTTTACGAGATCGGTGGATCTGGGATACTACCCGAGAAAATGGAAACAGACGCGCATCATCGTCCTC
CGCAAGCCCGGCAAGCCGGATTACTCAGTGCCGGGAGCGTACCGGCCGATCTCCCTGCTCAACACACTGGGAAAG
TTGCTGGAAGCCGTCATAGCCCGAAGACTCTCATACTGGGCAGAAAAATACAAGCTACTTCCCGACACTCAGTTT
GGAGGTAGACCAGGACGAAACACTGAACAAGCCCTGCTGGTGCTCGCCAACGCAGTTGATCGAGCATGGGTCCGA
TCCAGGGTAGTTACTCTGATTGCGTTTGACCTAAAAGGTGCCTTTAACGGGGTCAACAAGGCCACTCTCGATGCG
CGACTTCGCGCGAAAGGGGTGCCATCCAAAGCCCGACTGTGGATCTACAGTTTCATGCAGAATCGAGAAGCCAGT
GTGACACTAGAGGACTTTGAGACAGACAGCACTCCCCTAGAAAATGCAGCGCTAGCCCAAGGATCTCCCCTATCA
CCAATCCTATTTGGATTCTATAATTCAGATCTGGTGGATCAACCGGTAAACAGCAACGGCGGGGCGTCAGCATTC
ATTGACGATTACTTTCGCTGGCGAACCAGTTCCTCGGTAGAGGAGAATATCAAAAAGATTCAGGAAGAGGACATC
CCGCGGATCGAGCAGTGGGCACGGAGGACCGGCGCGTCGTTTGCAGCCGAGAAAACCGAGCTGATTCACCTCACA
CGTCGCAAACCAGCCCAGGGCAAGGGCGAGATAACTATGAACGGTAAAGTGATCAAACCAGCGGACACGGCCAAA
CTCCTGGGGGTCATCTTCGACACAGAGATGCGATGGAAAGAACATGTACAACACGCGGTTAAGCAGGCAACCAAA
AGGATTATCGCCCTGAGCGGGCTCCGACACCTTTGA
Transcript >Ani_SJS100_1|g10524.t1
ATGCACAAAGCCTTTGAAGCGAGCAGCGCCCACGATGTCCTAACGAAAATCCGACAAACCATCCAACGAAACACA
GAACCAGGCAATCGCGCCGTCAAATTAATTCTGGCGGGAGATTTCAACCGCCACCACCCGGCATGGAGCCACCGC
GAAGTACATCACCGCTTCGCAGCACATGCGGACGAACTGATCAACTTCTTCCACAACTTGGAGCTGCAATGGTGC
CTGAGCCCCGGCGAAACGACATTCTGGGCACTCAACAAACCGGGCACCACGTCAGTTTTAGACCTTACACTAACC
AACGATATGAACAGGCTGGTCAAGTGCCAACTATATCACGATAATTATGGATCAGACCATAGAGGAACGTACTCC
GAATGGAGTCTCCACCCGGAGCAAGCGAAAAAGCCCAAACCAAAACGAGCCTACAGCCGTGCAGACTGGACTCGC
GTAGGCCAAACCATACTGAGGGAGATAAACCAGTACCCGAGAATCCAGACAAACAGAGATCTAGACCATGCGGTT
GAAAACCTGATTCAAACTACGACAGCAGCTCTGGACCGACACGTACCAGTACAGGCACCATGCCCATACTCAAAA
CGCTGGTTCACTCCCGAACTCAAGACCCAGCAAGTGGAAGCCAACCAAGCCCGAAGAAAGTGGCAAGATGGATGT
GCTACCTGGGGATCTGACCACCCAAATACCAAGTCCATGTTTGAGATAATGCGCGAGAAGAGAAGAAAGTGGACG
AGAGCCGTGGAAAAAGCAAAGGCAACCCACTGGAAAGTGTTCTTGGACAAAGCAGGCGAAGGCCAGATATGGAAA
GCAGCCACCTACATGCGCCCGCGAGACGCCTATATGAGCATCCCAGCAATCCAAGTGAGTACTGAGGAAATTGCT
GATAACCAACGCAAGGCGGAAGCATTTCTTGAAACCTTCTTCCCGAAGATGTCCGAACCGGAAAGTGAAGAAGTC
AGCCCGGCTGAAGAACTACCATGGGAGCCGATCACCGAGGAGGAGATCTACCGATCACTCCGAGTCGCAAAGGGG
ACTACAGCCCCGGGCCGAGACGGAATCCCGACCCTGGTCTGGAAACATCTCTGGACGTTTCTGAAGGGAACTATT
ACTACTATCTTTACGAGATCGGTGGATCTGGGATACTACCCGAGAAAATGGAAACAGACGCGCATCATCGTCCTC
CGCAAGCCCGGCAAGCCGGATTACTCAGTGCCGGGAGCGTACCGGCCGATCTCCCTGCTCAACACACTGGGAAAG
TTGCTGGAAGCCGTCATAGCCCGAAGACTCTCATACTGGGCAGAAAAATACAAGCTACTTCCCGACACTCAGTTT
GGAGGTAGACCAGGACGAAACACTGAACAAGCCCTGCTGGTGCTCGCCAACGCAGTTGATCGAGCATGGGTCCGA
TCCAGGGTAGTTACTCTGATTGCGTTTGACCTAAAAGGTGCCTTTAACGGGGTCAACAAGGCCACTCTCGATGCG
CGACTTCGCGCGAAAGGGGTGCCATCCAAAGCCCGACTGTGGATCTACAGTTTCATGCAGAATCGAGAAGCCAGT
GTGACACTAGAGGACTTTGAGACAGACAGCACTCCCCTAGAAAATGCAGCGCTAGCCCAAGGATCTCCCCTATCA
CCAATCCTATTTGGATTCTATAATTCAGATCTGGTGGATCAACCGGTAAACAGCAACGGCGGGGCGTCAGCATTC
ATTGACGATTACTTTCGCTGGCGAACCAGTTCCTCGGTAGAGGAGAATATCAAAAAGATTCAGGAAGAGGACATC
CCGCGGATCGAGCAGTGGGCACGGAGGACCGGCGCGTCGTTTGCAGCCGAGAAAACCGAGCTGATTCACCTCACA
CGTCGCAAACCAGCCCAGGGCAAGGGCGAGATAACTATGAACGGTAAAGTGATCAAACCAGCGGACACGGCCAAA
CTCCTGGGGGTCATCTTCGACACAGAGATGCGATGGAAAGAACATGTACAACACGCGGTTAAGCAGGCAACCAAA
AGGATTATCGCCCTGAGCGGGCTCCGACACCTTTGA
Gene >Ani_SJS100_1|g10524.t1
ATGCACAAAGCCTTTGAAGCGAGCAGCGCCCACGATGTCCTAACGAAAATCCGACAAACCATCCAACGAAACACA
GAACCAGGCAATCGCGCCGTCAAATTAATTCTGGCGGGAGATTTCAACCGCCACCACCCGGCATGGAGCCACCGC
GAAGTACATCACCGCTTCGCAGCACATGCGGACGAACTGATCAACTTCTTCCACAACTTGGAGCTGCAATGGTGC
CTGAGCCCCGGCGAAACGACATTCTGGGCACTCAACAAACCGGGCACCACGTCAGTTTTAGACCTTACACTAACC
AACGATATGAACAGGCTGGTCAAGTGCCAACTATATCACGATAATTATGGATCAGACCATAGAGGAACGTACTCC
GAATGGAGTCTCCACCCGGAGCAAGCGAAAAAGCCCAAACCAAAACGAGCCTACAGCCGTGCAGACTGGACTCGC
GTAGGCCAAACCATACTGAGGGAGATAAACCAGTACCCGAGAATCCAGACAAACAGAGATCTAGACCATGCGGTT
GAAAACCTGATTCAAACTACGACAGCAGCTCTGGACCGACACGTACCAGTACAGGCACCATGCCCATACTCAAAA
CGCTGGTTCACTCCCGAACTCAAGACCCAGCAAGTGGAAGCCAACCAAGCCCGAAGAAAGTGGCAAGATGGATGT
GCTACCTGGGGATCTGACCACCCAAATACCAAGTCCATGTTTGAGATAATGCGCGAGAAGAGAAGAAAGTGGACG
AGAGCCGTGGAAAAAGCAAAGGCAACCCACTGGAAAGTGTTCTTGGACAAAGCAGGCGAAGGCCAGATATGGAAA
GCAGCCACCTACATGCGCCCGCGAGACGCCTATATGAGCATCCCAGCAATCCAAGTGAGTACTGAGGAAATTGCT
GATAACCAACGCAAGGCGGAAGCATTTCTTGAAACCTTCTTCCCGAAGATGTCCGAACCGGAAAGTGAAGAAGTC
AGCCCGGCTGAAGAACTACCATGGGAGCCGATCACCGAGGAGGAGATCTACCGATCACTCCGAGTCGCAAAGGGG
ACTACAGCCCCGGGCCGAGACGGAATCCCGACCCTGGTCTGGAAACATCTCTGGACGTTTCTGAAGGGAACTATT
ACTACTATCTTTACGAGATCGGTGGATCTGGGATACTACCCGAGAAAATGGAAACAGACGCGCATCATCGTCCTC
CGCAAGCCCGGCAAGCCGGATTACTCAGTGCCGGGAGCGTACCGGCCGATCTCCCTGCTCAACACACTGGGAAAG
TTGCTGGAAGCCGTCATAGCCCGAAGACTCTCATACTGGGCAGAAAAATACAAGCTACTTCCCGACACTCAGTTT
GGAGGTAGACCAGGACGAAACACTGAACAAGCCCTGCTGGTGCTCGCCAACGCAGTTGATCGAGCATGGGTCCGA
TCCAGGGTAGTTACTCTGATTGCGTTTGACCTAAAAGGTGCCTTTAACGGGGTCAACAAGGCCACTCTCGATGCG
CGACTTCGCGCGAAAGGGGTGCCATCCAAAGCCCGACTGTGGATCTACAGTTTCATGCAGAATCGAGAAGCCAGT
GTGACACTAGAGGACTTTGAGACAGACAGCACTCCCCTAGAAAATGCAGCGCTAGCCCAAGGATCTCCCCTATCA
CCAATCCTATTTGGATTCTATAATTCAGATCTGGTGGATCAACCGGTAAACAGCAACGGCGGGGCGTCAGCATTC
ATTGACGATTACTTTCGCTGGCGAACCAGTTCCTCGGTAGAGGAGAATATCAAAAAGATTCAGGAAGAGGACATC
CCGCGGATCGAGCAGTGGGCACGGAGGACCGGCGCGTCGTTTGCAGCCGAGAAAACCGAGCTGATTCACCTCACA
CGTCGCAAACCAGCCCAGGGCAAGGGCGAGATAACTATGAACGGTAAAGTGATCAAACCAGCGGACACGGCCAAA
CTCCTGGGGGTCATCTTCGACACAGAGATGCGATGGAAAGAACATGTACAACACGCGGTTAAGCAGGCAACCAAA
AGGATTATCGCCCTGAGCGGGCTCCGACACCTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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