© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10507.t1 |
| Gene name | |
| Location | scaffold_119:44673..45693 |
| Strand | - |
| Gene length (bp) | 1020 |
| Transcript length (bp) | 1020 |
| Coding sequence length (bp) | 1020 |
| Protein length (aa) | 340 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01040 | UbiA | UbiA prenyltransferase family | 3.1E-35 | 66 | 314 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | Yes |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0005575 | cellular_component | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 60 | 79 | 19 |
| 2 | 83 | 102 | 19 |
| 3 | 184 | 206 | 22 |
| 4 | 210 | 232 | 22 |
| 5 | 257 | 278 | 21 |
| 6 | 282 | 304 | 22 |
| 7 | 311 | 333 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10507.t1 METLTQRQTVHKVAITAHHEGVKAQTQPPVTNEMPIQGVAKLVPSSWVPYVQLMRLDRPGFLGFFMPTLMGLSAG ATLADPPIAPLDFFKSFLFFWFVTNFIRGAACTWNDNLDQEFDRQVPRTRCRPIARGAVSTTQGHIFTLAQVAIT AWILSHLPAQCHAYSLAMGVLHAIYPLCKRFMDFTPVFLGLPFSVTMILPAVGMGVDPFSAPAACLFMVEFIWTI IYETIYAHQDVQHDVQAGVKSMAVRYRHSTKIIASVLGVVMVGLMIAVGVLAGLSGIYFLVGCGGTALSLVVMIY SVDLTKPASCLYWFRMGFYIVGGSKSAGFLAQYLVDLLG* |
| Coding | >Ani_SJS100_1|g10507.t1 ATGGAAACCCTTACCCAGCGACAAACCGTGCACAAAGTGGCCATAACCGCCCATCACGAGGGGGTCAAAGCCCAG ACTCAACCCCCTGTCACAAACGAAATGCCAATCCAAGGCGTTGCCAAATTAGTCCCTTCATCCTGGGTCCCCTAC GTGCAACTAATGCGGCTTGACCGGCCGGGCTTCCTCGGCTTCTTCATGCCAACCCTGATGGGCCTCTCCGCGGGG GCCACTCTCGCCGATCCACCTATCGCCCCCCTTGATTTCTTCAAATCCTTCCTCTTCTTCTGGTTCGTCACCAAC TTCATCCGCGGGGCTGCCTGCACCTGGAACGACAACCTCGACCAAGAGTTCGACCGCCAAGTGCCCCGGACCCGC TGTCGGCCCATTGCCCGCGGTGCCGTCTCCACCACGCAAGGCCACATCTTCACCCTTGCTCAAGTCGCCATCACC GCCTGGATCCTGAGCCACCTCCCCGCCCAATGTCATGCTTATAGTCTCGCCATGGGCGTGCTCCACGCCATCTAC CCCCTCTGTAAACGCTTCATGGACTTCACCCCCGTCTTCCTGGGTCTGCCCTTCTCCGTGACTATGATCCTTCCC GCTGTCGGGATGGGCGTGGACCCCTTCTCTGCTCCTGCGGCTTGCCTGTTCATGGTTGAGTTCATCTGGACGATC ATTTATGAGACGATCTACGCACACCAGGACGTGCAGCATGATGTCCAAGCGGGAGTGAAGTCCATGGCGGTGCGG TATAGACATTCCACTAAGATCATTGCCTCCGTGCTGGGTGTGGTCATGGTTGGGCTCATGATTGCTGTGGGTGTT CTTGCTGGCTTGTCGGGCATTTACTTTCTCGTTGGCTGTGGTGGCACGGCGCTTTCGTTGGTGGTTATGATTTAT TCGGTGGATTTGACTAAGCCTGCTAGTTGTCTGTATTGGTTCCGTATGGGCTTCTATATTGTGGGTGGCAGTAAG TCGGCTGGGTTTTTGGCCCAGTATTTGGTGGATCTTTTGGGATAA |
| Transcript | >Ani_SJS100_1|g10507.t1 ATGGAAACCCTTACCCAGCGACAAACCGTGCACAAAGTGGCCATAACCGCCCATCACGAGGGGGTCAAAGCCCAG ACTCAACCCCCTGTCACAAACGAAATGCCAATCCAAGGCGTTGCCAAATTAGTCCCTTCATCCTGGGTCCCCTAC GTGCAACTAATGCGGCTTGACCGGCCGGGCTTCCTCGGCTTCTTCATGCCAACCCTGATGGGCCTCTCCGCGGGG GCCACTCTCGCCGATCCACCTATCGCCCCCCTTGATTTCTTCAAATCCTTCCTCTTCTTCTGGTTCGTCACCAAC TTCATCCGCGGGGCTGCCTGCACCTGGAACGACAACCTCGACCAAGAGTTCGACCGCCAAGTGCCCCGGACCCGC TGTCGGCCCATTGCCCGCGGTGCCGTCTCCACCACGCAAGGCCACATCTTCACCCTTGCTCAAGTCGCCATCACC GCCTGGATCCTGAGCCACCTCCCCGCCCAATGTCATGCTTATAGTCTCGCCATGGGCGTGCTCCACGCCATCTAC CCCCTCTGTAAACGCTTCATGGACTTCACCCCCGTCTTCCTGGGTCTGCCCTTCTCCGTGACTATGATCCTTCCC GCTGTCGGGATGGGCGTGGACCCCTTCTCTGCTCCTGCGGCTTGCCTGTTCATGGTTGAGTTCATCTGGACGATC ATTTATGAGACGATCTACGCACACCAGGACGTGCAGCATGATGTCCAAGCGGGAGTGAAGTCCATGGCGGTGCGG TATAGACATTCCACTAAGATCATTGCCTCCGTGCTGGGTGTGGTCATGGTTGGGCTCATGATTGCTGTGGGTGTT CTTGCTGGCTTGTCGGGCATTTACTTTCTCGTTGGCTGTGGTGGCACGGCGCTTTCGTTGGTGGTTATGATTTAT TCGGTGGATTTGACTAAGCCTGCTAGTTGTCTGTATTGGTTCCGTATGGGCTTCTATATTGTGGGTGGCAGTAAG TCGGCTGGGTTTTTGGCCCAGTATTTGGTGGATCTTTTGGGATAA |
| Gene | >Ani_SJS100_1|g10507.t1 ATGGAAACCCTTACCCAGCGACAAACCGTGCACAAAGTGGCCATAACCGCCCATCACGAGGGGGTCAAAGCCCAG ACTCAACCCCCTGTCACAAACGAAATGCCAATCCAAGGCGTTGCCAAATTAGTCCCTTCATCCTGGGTCCCCTAC GTGCAACTAATGCGGCTTGACCGGCCGGGCTTCCTCGGCTTCTTCATGCCAACCCTGATGGGCCTCTCCGCGGGG GCCACTCTCGCCGATCCACCTATCGCCCCCCTTGATTTCTTCAAATCCTTCCTCTTCTTCTGGTTCGTCACCAAC TTCATCCGCGGGGCTGCCTGCACCTGGAACGACAACCTCGACCAAGAGTTCGACCGCCAAGTGCCCCGGACCCGC TGTCGGCCCATTGCCCGCGGTGCCGTCTCCACCACGCAAGGCCACATCTTCACCCTTGCTCAAGTCGCCATCACC GCCTGGATCCTGAGCCACCTCCCCGCCCAATGTCATGCTTATAGTCTCGCCATGGGCGTGCTCCACGCCATCTAC CCCCTCTGTAAACGCTTCATGGACTTCACCCCCGTCTTCCTGGGTCTGCCCTTCTCCGTGACTATGATCCTTCCC GCTGTCGGGATGGGCGTGGACCCCTTCTCTGCTCCTGCGGCTTGCCTGTTCATGGTTGAGTTCATCTGGACGATC ATTTATGAGACGATCTACGCACACCAGGACGTGCAGCATGATGTCCAAGCGGGAGTGAAGTCCATGGCGGTGCGG TATAGACATTCCACTAAGATCATTGCCTCCGTGCTGGGTGTGGTCATGGTTGGGCTCATGATTGCTGTGGGTGTT CTTGCTGGCTTGTCGGGCATTTACTTTCTCGTTGGCTGTGGTGGCACGGCGCTTTCGTTGGTGGTTATGATTTAT TCGGTGGATTTGACTAAGCCTGCTAGTTGTCTGTATTGGTTCCGTATGGGCTTCTATATTGTGGGTGGCAGTAAG TCGGCTGGGTTTTTGGCCCAGTATTTGGTGGATCTTTTGGGATAA |