© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1050.t1 |
| Gene name | |
| Location | scaffold_003:700626..702298 |
| Strand | - |
| Gene length (bp) | 1672 |
| Transcript length (bp) | 1557 |
| Coding sequence length (bp) | 1557 |
| Protein length (aa) | 519 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 2.9E-124 | 13 | 477 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 9.2E-25 | 19 | 427 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 60 | 82 | 22 |
| 3 | 89 | 106 | 17 |
| 4 | 116 | 138 | 22 |
| 5 | 145 | 167 | 22 |
| 6 | 182 | 204 | 22 |
| 7 | 273 | 295 | 22 |
| 8 | 310 | 332 | 22 |
| 9 | 339 | 361 | 22 |
| 10 | 371 | 393 | 22 |
| 11 | 412 | 429 | 17 |
| 12 | 439 | 461 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1050.t1 MSLLKNYRVYLLTAVAYSGSLLFGYDTGVMGSVLSLTSFKEDFGIPTGSSGFASSKSSEISSNVVSLLTAGCFFG AIFAAPLNERIGRRYALMIFTVIFLIGAAVQVASKHHIGQIYGGRVIAGLGIGGMSSITPVFVSENCPPSIRGRV AGMFQEFLVIGSTFAYWLDYGVSLHIPSSTKQWRVPVAVQLIPGGLMLLGLFFLKESPRWLAGKGRHEEALQSLA YIRNESPDSEEIQKEFAEIRAAIDEEVAATEGLTYKEFIQPSNLKRFGFAFTLMLSQQFTGTNSIGYYAPEIFQT IGLSATNSSLFATGVYGTVKVVATAIFLFVGIDRWGRKLSLVGGSIWMASMMFIIGAVLATHPPDTSASGVSQAS IAMVVMIYLYVIGYSASWGPTPWVYVSEIFPTRLRSYGVGLAATSQWLWSFVVTEITPKAVHNIGWRTFLMFGIF CVAMCVFVIVFAKETKGRSLEDMDILFGAVNEADRRAAVEHTMHKRGSSHIEDVDEETERVRHEQDKV* |
| Coding | >Ani_SJS100_1|g1050.t1 ATGAGTCTCCTCAAGAACTATCGTGTTTACCTCCTCACAGCAGTGGCCTACTCGGGGTCACTTCTTTTCGGCTAT GATACGGGTGTTATGGGAAGTGTTCTTTCCCTGACCAGCTTCAAGGAAGATTTTGGGATACCTACTGGCTCTTCT GGTTTTGCGTCCTCCAAGAGCTCCGAAATCTCATCCAATGTCGTATCCTTGCTGACTGCGGGCTGCTTCTTCGGC GCCATCTTCGCTGCCCCCCTTAACGAGCGCATTGGCCGACGCTATGCCCTGATGATCTTCACCGTCATATTTCTC ATTGGAGCAGCTGTTCAAGTTGCATCGAAGCATCACATTGGACAGATCTATGGTGGCCGTGTCATAGCGGGCTTG GGAATTGGTGGAATGTCCAGTATCACGCCTGTGTTCGTGAGCGAGAACTGCCCCCCAAGCATTCGAGGCCGAGTT GCTGGAATGTTCCAGGAGTTCCTGGTCATTGGAAGCACCTTTGCCTATTGGCTGGACTATGGTGTCTCCCTGCAC ATTCCCTCAAGCACGAAGCAATGGCGTGTCCCAGTCGCTGTCCAGCTTATTCCTGGCGGTCTTATGCTACTCGGC CTTTTCTTCCTCAAGGAGTCTCCTCGTTGGCTGGCTGGCAAAGGACGCCATGAAGAAGCTCTTCAGTCACTCGCA TACATCAGGAACGAGTCCCCTGATAGCGAGGAGATTCAGAAAGAGTTTGCTGAGATCCGAGCAGCCATCGATGAA GAGGTAGCAGCCACCGAAGGGCTGACTTACAAAGAGTTTATCCAGCCGAGTAACCTCAAACGCTTCGGTTTCGCC TTCACTCTCATGCTTTCACAACAATTCACGGGTACCAATTCGATCGGTTACTACGCTCCTGAGATCTTCCAAACT ATCGGGCTTAGCGCGACTAACTCGTCTCTTTTTGCTACTGGCGTCTACGGAACTGTGAAGGTTGTCGCGACGGCT ATCTTCCTATTTGTTGGTATCGACCGTTGGGGCCGTAAGCTCAGTCTGGTTGGCGGATCCATTTGGATGGCCAGC ATGATGTTCATCATTGGCGCTGTATTGGCTACGCACCCGCCCGACACAAGCGCCAGTGGCGTCTCCCAGGCTTCT ATCGCCATGGTGGTCATGATCTATCTCTACGTGATCGGCTATTCGGCTTCATGGGGCCCTACCCCCTGGGTGTAT GTGAGCGAGATCTTCCCGACCCGGCTACGTTCATACGGTGTCGGTCTGGCAGCCACATCCCAGTGGCTCTGGAGT TTCGTCGTCACTGAAATCACCCCCAAAGCCGTCCACAACATCGGCTGGCGCACATTCCTCATGTTTGGTATCTTC TGCGTTGCCATGTGTGTCTTCGTCATTGTCTTCGCCAAGGAAACCAAGGGCCGCAGTCTTGAGGATATGGACATC CTCTTCGGTGCTGTCAATGAGGCCGACCGCCGTGCTGCGGTGGAACATACCATGCACAAGCGCGGCTCCTCTCAC ATCGAGGACGTGGATGAGGAAACCGAGCGTGTTCGCCATGAGCAGGACAAGGTCTAG |
| Transcript | >Ani_SJS100_1|g1050.t1 ATGAGTCTCCTCAAGAACTATCGTGTTTACCTCCTCACAGCAGTGGCCTACTCGGGGTCACTTCTTTTCGGCTAT GATACGGGTGTTATGGGAAGTGTTCTTTCCCTGACCAGCTTCAAGGAAGATTTTGGGATACCTACTGGCTCTTCT GGTTTTGCGTCCTCCAAGAGCTCCGAAATCTCATCCAATGTCGTATCCTTGCTGACTGCGGGCTGCTTCTTCGGC GCCATCTTCGCTGCCCCCCTTAACGAGCGCATTGGCCGACGCTATGCCCTGATGATCTTCACCGTCATATTTCTC ATTGGAGCAGCTGTTCAAGTTGCATCGAAGCATCACATTGGACAGATCTATGGTGGCCGTGTCATAGCGGGCTTG GGAATTGGTGGAATGTCCAGTATCACGCCTGTGTTCGTGAGCGAGAACTGCCCCCCAAGCATTCGAGGCCGAGTT GCTGGAATGTTCCAGGAGTTCCTGGTCATTGGAAGCACCTTTGCCTATTGGCTGGACTATGGTGTCTCCCTGCAC ATTCCCTCAAGCACGAAGCAATGGCGTGTCCCAGTCGCTGTCCAGCTTATTCCTGGCGGTCTTATGCTACTCGGC CTTTTCTTCCTCAAGGAGTCTCCTCGTTGGCTGGCTGGCAAAGGACGCCATGAAGAAGCTCTTCAGTCACTCGCA TACATCAGGAACGAGTCCCCTGATAGCGAGGAGATTCAGAAAGAGTTTGCTGAGATCCGAGCAGCCATCGATGAA GAGGTAGCAGCCACCGAAGGGCTGACTTACAAAGAGTTTATCCAGCCGAGTAACCTCAAACGCTTCGGTTTCGCC TTCACTCTCATGCTTTCACAACAATTCACGGGTACCAATTCGATCGGTTACTACGCTCCTGAGATCTTCCAAACT ATCGGGCTTAGCGCGACTAACTCGTCTCTTTTTGCTACTGGCGTCTACGGAACTGTGAAGGTTGTCGCGACGGCT ATCTTCCTATTTGTTGGTATCGACCGTTGGGGCCGTAAGCTCAGTCTGGTTGGCGGATCCATTTGGATGGCCAGC ATGATGTTCATCATTGGCGCTGTATTGGCTACGCACCCGCCCGACACAAGCGCCAGTGGCGTCTCCCAGGCTTCT ATCGCCATGGTGGTCATGATCTATCTCTACGTGATCGGCTATTCGGCTTCATGGGGCCCTACCCCCTGGGTGTAT GTGAGCGAGATCTTCCCGACCCGGCTACGTTCATACGGTGTCGGTCTGGCAGCCACATCCCAGTGGCTCTGGAGT TTCGTCGTCACTGAAATCACCCCCAAAGCCGTCCACAACATCGGCTGGCGCACATTCCTCATGTTTGGTATCTTC TGCGTTGCCATGTGTGTCTTCGTCATTGTCTTCGCCAAGGAAACCAAGGGCCGCAGTCTTGAGGATATGGACATC CTCTTCGGTGCTGTCAATGAGGCCGACCGCCGTGCTGCGGTGGAACATACCATGCACAAGCGCGGCTCCTCTCAC ATCGAGGACGTGGATGAGGAAACCGAGCGTGTTCGCCATGAGCAGGACAAGGTCTAG |
| Gene | >Ani_SJS100_1|g1050.t1 ATGAGTCTCCTCAAGAACTATCGTGTTTACCTCCTCACAGCAGTGGCCTACTCGGGGTCACTTCTTTTCGGTATG TATGCACTCGGGAATCGGAATACGCTCTTTGAACTAACGCCTGATGACTATTAGGCTATGATACGGGTGTTATGG GAAGTGTTCTTTCCCTGACCAGCTTCAAGGAAGATTTTGGGATACCTACTGGCTCTTCTGGTTTTGCGTCCTCCA AGAGCTCCGAAATCTCATCCAATGTCGTATCCTTGCTGACTGCGGGCTGCTTCTTCGGCGCCATCTTCGCTGCCC CCCTTAACGAGCGCATTGGCCGACGCTATGCCCTGATGATCTTCACCGTCATATTTCTCATTGGAGCAGCTGTTC AAGTTGCATCGAAGCATCACATTGGACAGATCTATGGTGGCCGTGTCATAGCGGGCTTGGGAATTGGTGGAATGT CCAGTATCACGCCTGTGTTCGTGAGCGAGAACTGCCCCCCAAGCATTCGAGGCCGAGTTGCTGGAATGTTCCAGG AGTTCCTGGTCATTGGAAGCACCTTTGCCTATTGGCTGGACTATGGTGTCTCCCTGCACATTCCCTCAAGCACGA AGCAATGGCGTGTCCCAGTCGCTGTCCAGCTTATTCCTGGCGGTCTTATGCTACTCGGCCTTTTCTTCCTCAAGG AGTCTCCTCGTTGGCTGGCTGGCAAAGGACGCCATGAAGAAGCTCTTCAGTCACTCGCATACATCAGGAACGAGT CCCCTGATAGCGAGGAGATTCAGAAAGAGTTTGCTGAGATCCGAGCAGCCATCGATGAAGAGGTAGCAGCCACCG AAGGGCTGACTTACAAAGAGTTTATCCAGCCGAGTAACCTCAAACGCTTCGGTTTCGCCTTCACTCTCATGCTTT CACAACAATTCACGGGTACCAATTCGATCGGTTACTACGCTCCTGAGATCTTCCAAACTATCGGGCTTAGCGCGA CTAACTCGTCTCTTTTTGCTACTGGCGTCTACGGAACTGTGAAGGTTGTCGCGACGGCTATCTTCCTATTTGTTG GTATCGACCGTTGGGGCCGTAAGCTCAGTCTGGTTGGCGGATCCATTTGGATGGCCAGCATGATGTTCATCATTG GCGCTGTATTGGCTACGCACCCGCCCGACACAAGCGCCAGTGGCGTCTCCCAGGCTTCTATCGCCATGGTGGTCA TGATCTATCTCTACGTGATCGGCTATTCGGCTTCATGGGGCCCTACCCCCTGGGTGTATGTGAGCGAGGTAAGAA AACGGTTCCTGGGATCCACTTGGCACAAACCATCTAACAGGCCTGACAGATCTTCCCGACCCGGCTACGTTCATA CGGTGTCGGTCTGGCAGCCACATCCCAGTGGCTCTGGAGTTTCGTCGTCACTGAAATCACCCCCAAAGCCGTCCA CAACATCGGCTGGCGCACATTCCTCATGTTTGGTATCTTCTGCGTTGCCATGTGTGTCTTCGTCATTGTCTTCGC CAAGGAAACCAAGGGCCGCAGTCTTGAGGATATGGACATCCTCTTCGGTGCTGTCAATGAGGCCGACCGCCGTGC TGCGGTGGAACATACCATGCACAAGCGCGGCTCCTCTCACATCGAGGACGTGGATGAGGAAACCGAGCGTGTTCG CCATGAGCAGGACAAGGTCTAG |