© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10483.t1 |
| Gene name | |
| Location | scaffold_118:32956..35179 |
| Strand | + |
| Gene length (bp) | 2223 |
| Transcript length (bp) | 2223 |
| Coding sequence length (bp) | 2223 |
| Protein length (aa) | 741 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02005 | TRM | N2,N2-dimethylguanosine tRNA methyltransferase | 4.4E-98 | 92 | 484 |
| PF02005 | TRM | N2,N2-dimethylguanosine tRNA methyltransferase | 5.3E-13 | 521 | 583 |
| PF02475 | Met_10 | Met-10+ like-protein | 5.0E-06 | 205 | 293 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008033 | tRNA processing | Yes |
| GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | Yes |
| GO:0003723 | RNA binding | Yes |
| GO:0044238 | primary metabolic process | No |
| GO:0140640 | catalytic activity, acting on a nucleic acid | No |
| GO:0009987 | cellular process | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0008170 | N-methyltransferase activity | No |
| GO:0006396 | RNA processing | No |
| GO:0003674 | molecular_function | No |
| GO:0016740 | transferase activity | No |
| GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | No |
| GO:0008175 | tRNA methyltransferase activity | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0034470 | ncRNA processing | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0006399 | tRNA metabolic process | No |
| GO:0016070 | RNA metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:0016423 | tRNA (guanine) methyltransferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0034660 | ncRNA metabolic process | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0005488 | binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0008168 | methyltransferase activity | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0140101 | catalytic activity, acting on a tRNA | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| GO:0008152 | metabolic process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0008173 | RNA methyltransferase activity | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0140098 | catalytic activity, acting on RNA | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10483.t1 MSPHLGVLYRALSISFRFRSDRAIARCTALGIQQRPPLRRFYSTRSSAAEMAEQLIQYDGTEYRAVKEGLAYILN PPAQAPGTKRDRKADEQSQSVFYNPIQQFNRDLSVLAIRAYGEHLLALKKQKAEKKKQKAAANDSAKGKKRKREE VDGKEQTQDQNQGQGDQTAAQQAEQDTAPSFTILDALSATGLRALRYASEIPFTSCVVANDLSPSAIESMKTNIK YNSLGEKIRPNTGDARSYMYSLLNQQANTPTAESHLGKFDVIDLDPYGSAAPFMDAAVQGVKDGGLLCVTCTDAG VWASYGYPEKSFALYGGIPVKGPHCHEGGLRLILHGLAASAAKYGLAIEPLLSLSIDFYARVFVRVHRSPAEVKY ISGNMMMVYNCDAGCGAWSTQPITQTKQKLDKKGNPFYHFGFAQGPVADSRCGHCGSRTHLSGPMWAGPLHNAQF IRRILDMLPQADRNVYHTIDRIEGMLTTAMEEDLNLGISSDEANQTPTGTVGGDISENEYSAIIPRLDPAAREEY PFYFSLSALSKVLHTSTISIDAMRGAIRHLGYRSTRSHARPNTIRTDAPWEVIWEIMREWVRQKSPIREGALKPG SPGAVIMSKSRENIQGREGEDPSLALLKTELQAVTEEAKDVKDMITKIEAALYRSGARQALGRKRRESDPPREQP GTTQKDLQDTKPPRSPNGAGRPHPSTLEVVFDEALGRETAKKRLVRYQINPRENWGPLSRASGGK* |
| Coding | >Ani_SJS100_1|g10483.t1 ATGAGCCCACACCTTGGTGTCCTTTATCGTGCTCTCTCAATCAGTTTCAGATTCCGCAGTGATCGCGCAATTGCC CGCTGCACCGCCCTAGGAATCCAACAACGCCCGCCACTCCGCCGATTCTACTCTACCCGCTCATCGGCTGCGGAG ATGGCTGAACAATTGATACAGTATGACGGCACTGAGTACAGAGCAGTGAAGGAAGGATTGGCGTACATTCTGAAC CCCCCGGCTCAGGCTCCCGGCACGAAAAGGGATCGCAAAGCTGACGAGCAATCGCAATCAGTCTTCTACAACCCT ATTCAACAATTCAACCGGGACCTTAGTGTCCTTGCCATTCGCGCATATGGGGAGCATTTGCTGGCCTTGAAGAAA CAGAAGGCCGAGAAGAAGAAGCAAAAGGCTGCGGCGAACGACTCCGCGAAGGGCAAGAAACGCAAGAGAGAAGAG GTCGATGGCAAGGAACAAACGCAGGATCAGAATCAAGGCCAAGGGGATCAGACTGCAGCACAGCAGGCAGAGCAG GACACGGCGCCATCTTTTACGATTCTAGACGCCCTCTCGGCTACGGGTCTGCGTGCCCTGCGATATGCTTCGGAG ATACCTTTCACTTCTTGCGTCGTCGCAAACGACCTGTCGCCCTCGGCCATTGAATCCATGAAGACGAACATCAAA TACAACAGTCTCGGCGAAAAAATCCGTCCCAACACCGGGGATGCGCGCTCTTACATGTACAGTCTTCTAAACCAA CAAGCCAATACCCCAACTGCCGAGAGCCACCTAGGAAAATTCGACGTGATTGATCTGGACCCTTACGGCTCTGCT GCACCTTTTATGGACGCTGCGGTTCAGGGAGTCAAGGATGGCGGTCTTCTTTGTGTTACCTGTACCGATGCAGGT GTCTGGGCCTCGTACGGGTATCCCGAGAAGTCGTTCGCCCTATACGGCGGAATCCCAGTCAAAGGACCGCATTGC CATGAAGGTGGCCTGCGTCTCATCCTGCACGGGCTTGCAGCCTCCGCTGCGAAATATGGTCTCGCGATTGAGCCA CTTCTCTCCCTATCGATCGACTTTTATGCCCGAGTCTTCGTCCGTGTCCACCGCTCTCCGGCCGAAGTCAAGTAT ATCTCTGGAAACATGATGATGGTCTATAATTGCGATGCTGGCTGTGGCGCGTGGTCAACTCAGCCTATCACCCAG ACGAAACAGAAGCTGGACAAGAAAGGAAATCCGTTCTACCACTTCGGCTTCGCTCAGGGTCCGGTAGCAGATAGT CGTTGTGGCCATTGTGGCTCTAGGACTCACCTCAGCGGTCCTATGTGGGCTGGCCCTCTTCACAATGCACAATTT ATCCGCAGAATCCTTGATATGCTCCCCCAGGCAGATAGGAACGTGTATCACACGATTGACCGGATTGAGGGAATG CTGACTACGGCAATGGAAGAAGATCTGAATCTAGGAATTTCTAGTGACGAAGCAAACCAGACACCTACTGGCACA GTTGGTGGGGATATCTCCGAGAACGAATACTCTGCAATCATCCCGCGGCTCGATCCCGCCGCCCGGGAAGAATAC CCCTTCTACTTCAGTCTTAGCGCCTTATCCAAAGTCTTGCATACATCCACAATTTCCATTGATGCCATGCGTGGG GCTATTCGACACCTTGGCTATCGATCAACCCGCAGCCACGCCAGACCGAATACGATTCGTACCGATGCTCCTTGG GAGGTGATCTGGGAGATCATGAGGGAATGGGTGAGACAGAAGTCTCCCATCAGAGAAGGCGCCCTAAAGCCCGGA AGTCCCGGCGCTGTCATTATGTCCAAGAGCAGGGAGAACATTCAAGGCCGTGAGGGGGAAGACCCGTCTCTGGCG CTTCTCAAGACCGAGCTTCAAGCAGTCACAGAGGAAGCAAAAGATGTCAAAGATATGATTACCAAAATTGAAGCT GCCTTGTATCGCTCCGGTGCCCGTCAAGCGTTGGGGAGGAAGAGAAGGGAATCTGATCCTCCGCGTGAACAGCCG GGAACAACGCAGAAGGATCTCCAGGACACAAAGCCTCCCCGTAGCCCCAATGGTGCAGGCAGACCGCACCCTAGC ACGCTGGAGGTTGTATTCGATGAGGCCTTGGGTAGGGAGACGGCCAAGAAGCGACTGGTGCGGTATCAAATTAAT CCTCGTGAGAACTGGGGTCCTCTGAGCCGAGCATCCGGAGGCAAGTAG |
| Transcript | >Ani_SJS100_1|g10483.t1 ATGAGCCCACACCTTGGTGTCCTTTATCGTGCTCTCTCAATCAGTTTCAGATTCCGCAGTGATCGCGCAATTGCC CGCTGCACCGCCCTAGGAATCCAACAACGCCCGCCACTCCGCCGATTCTACTCTACCCGCTCATCGGCTGCGGAG ATGGCTGAACAATTGATACAGTATGACGGCACTGAGTACAGAGCAGTGAAGGAAGGATTGGCGTACATTCTGAAC CCCCCGGCTCAGGCTCCCGGCACGAAAAGGGATCGCAAAGCTGACGAGCAATCGCAATCAGTCTTCTACAACCCT ATTCAACAATTCAACCGGGACCTTAGTGTCCTTGCCATTCGCGCATATGGGGAGCATTTGCTGGCCTTGAAGAAA CAGAAGGCCGAGAAGAAGAAGCAAAAGGCTGCGGCGAACGACTCCGCGAAGGGCAAGAAACGCAAGAGAGAAGAG GTCGATGGCAAGGAACAAACGCAGGATCAGAATCAAGGCCAAGGGGATCAGACTGCAGCACAGCAGGCAGAGCAG GACACGGCGCCATCTTTTACGATTCTAGACGCCCTCTCGGCTACGGGTCTGCGTGCCCTGCGATATGCTTCGGAG ATACCTTTCACTTCTTGCGTCGTCGCAAACGACCTGTCGCCCTCGGCCATTGAATCCATGAAGACGAACATCAAA TACAACAGTCTCGGCGAAAAAATCCGTCCCAACACCGGGGATGCGCGCTCTTACATGTACAGTCTTCTAAACCAA CAAGCCAATACCCCAACTGCCGAGAGCCACCTAGGAAAATTCGACGTGATTGATCTGGACCCTTACGGCTCTGCT GCACCTTTTATGGACGCTGCGGTTCAGGGAGTCAAGGATGGCGGTCTTCTTTGTGTTACCTGTACCGATGCAGGT GTCTGGGCCTCGTACGGGTATCCCGAGAAGTCGTTCGCCCTATACGGCGGAATCCCAGTCAAAGGACCGCATTGC CATGAAGGTGGCCTGCGTCTCATCCTGCACGGGCTTGCAGCCTCCGCTGCGAAATATGGTCTCGCGATTGAGCCA CTTCTCTCCCTATCGATCGACTTTTATGCCCGAGTCTTCGTCCGTGTCCACCGCTCTCCGGCCGAAGTCAAGTAT ATCTCTGGAAACATGATGATGGTCTATAATTGCGATGCTGGCTGTGGCGCGTGGTCAACTCAGCCTATCACCCAG ACGAAACAGAAGCTGGACAAGAAAGGAAATCCGTTCTACCACTTCGGCTTCGCTCAGGGTCCGGTAGCAGATAGT CGTTGTGGCCATTGTGGCTCTAGGACTCACCTCAGCGGTCCTATGTGGGCTGGCCCTCTTCACAATGCACAATTT ATCCGCAGAATCCTTGATATGCTCCCCCAGGCAGATAGGAACGTGTATCACACGATTGACCGGATTGAGGGAATG CTGACTACGGCAATGGAAGAAGATCTGAATCTAGGAATTTCTAGTGACGAAGCAAACCAGACACCTACTGGCACA GTTGGTGGGGATATCTCCGAGAACGAATACTCTGCAATCATCCCGCGGCTCGATCCCGCCGCCCGGGAAGAATAC CCCTTCTACTTCAGTCTTAGCGCCTTATCCAAAGTCTTGCATACATCCACAATTTCCATTGATGCCATGCGTGGG GCTATTCGACACCTTGGCTATCGATCAACCCGCAGCCACGCCAGACCGAATACGATTCGTACCGATGCTCCTTGG GAGGTGATCTGGGAGATCATGAGGGAATGGGTGAGACAGAAGTCTCCCATCAGAGAAGGCGCCCTAAAGCCCGGA AGTCCCGGCGCTGTCATTATGTCCAAGAGCAGGGAGAACATTCAAGGCCGTGAGGGGGAAGACCCGTCTCTGGCG CTTCTCAAGACCGAGCTTCAAGCAGTCACAGAGGAAGCAAAAGATGTCAAAGATATGATTACCAAAATTGAAGCT GCCTTGTATCGCTCCGGTGCCCGTCAAGCGTTGGGGAGGAAGAGAAGGGAATCTGATCCTCCGCGTGAACAGCCG GGAACAACGCAGAAGGATCTCCAGGACACAAAGCCTCCCCGTAGCCCCAATGGTGCAGGCAGACCGCACCCTAGC ACGCTGGAGGTTGTATTCGATGAGGCCTTGGGTAGGGAGACGGCCAAGAAGCGACTGGTGCGGTATCAAATTAAT CCTCGTGAGAACTGGGGTCCTCTGAGCCGAGCATCCGGAGGCAAGTAG |
| Gene | >Ani_SJS100_1|g10483.t1 ATGAGCCCACACCTTGGTGTCCTTTATCGTGCTCTCTCAATCAGTTTCAGATTCCGCAGTGATCGCGCAATTGCC CGCTGCACCGCCCTAGGAATCCAACAACGCCCGCCACTCCGCCGATTCTACTCTACCCGCTCATCGGCTGCGGAG ATGGCTGAACAATTGATACAGTATGACGGCACTGAGTACAGAGCAGTGAAGGAAGGATTGGCGTACATTCTGAAC CCCCCGGCTCAGGCTCCCGGCACGAAAAGGGATCGCAAAGCTGACGAGCAATCGCAATCAGTCTTCTACAACCCT ATTCAACAATTCAACCGGGACCTTAGTGTCCTTGCCATTCGCGCATATGGGGAGCATTTGCTGGCCTTGAAGAAA CAGAAGGCCGAGAAGAAGAAGCAAAAGGCTGCGGCGAACGACTCCGCGAAGGGCAAGAAACGCAAGAGAGAAGAG GTCGATGGCAAGGAACAAACGCAGGATCAGAATCAAGGCCAAGGGGATCAGACTGCAGCACAGCAGGCAGAGCAG GACACGGCGCCATCTTTTACGATTCTAGACGCCCTCTCGGCTACGGGTCTGCGTGCCCTGCGATATGCTTCGGAG ATACCTTTCACTTCTTGCGTCGTCGCAAACGACCTGTCGCCCTCGGCCATTGAATCCATGAAGACGAACATCAAA TACAACAGTCTCGGCGAAAAAATCCGTCCCAACACCGGGGATGCGCGCTCTTACATGTACAGTCTTCTAAACCAA CAAGCCAATACCCCAACTGCCGAGAGCCACCTAGGAAAATTCGACGTGATTGATCTGGACCCTTACGGCTCTGCT GCACCTTTTATGGACGCTGCGGTTCAGGGAGTCAAGGATGGCGGTCTTCTTTGTGTTACCTGTACCGATGCAGGT GTCTGGGCCTCGTACGGGTATCCCGAGAAGTCGTTCGCCCTATACGGCGGAATCCCAGTCAAAGGACCGCATTGC CATGAAGGTGGCCTGCGTCTCATCCTGCACGGGCTTGCAGCCTCCGCTGCGAAATATGGTCTCGCGATTGAGCCA CTTCTCTCCCTATCGATCGACTTTTATGCCCGAGTCTTCGTCCGTGTCCACCGCTCTCCGGCCGAAGTCAAGTAT ATCTCTGGAAACATGATGATGGTCTATAATTGCGATGCTGGCTGTGGCGCGTGGTCAACTCAGCCTATCACCCAG ACGAAACAGAAGCTGGACAAGAAAGGAAATCCGTTCTACCACTTCGGCTTCGCTCAGGGTCCGGTAGCAGATAGT CGTTGTGGCCATTGTGGCTCTAGGACTCACCTCAGCGGTCCTATGTGGGCTGGCCCTCTTCACAATGCACAATTT ATCCGCAGAATCCTTGATATGCTCCCCCAGGCAGATAGGAACGTGTATCACACGATTGACCGGATTGAGGGAATG CTGACTACGGCAATGGAAGAAGATCTGAATCTAGGAATTTCTAGTGACGAAGCAAACCAGACACCTACTGGCACA GTTGGTGGGGATATCTCCGAGAACGAATACTCTGCAATCATCCCGCGGCTCGATCCCGCCGCCCGGGAAGAATAC CCCTTCTACTTCAGTCTTAGCGCCTTATCCAAAGTCTTGCATACATCCACAATTTCCATTGATGCCATGCGTGGG GCTATTCGACACCTTGGCTATCGATCAACCCGCAGCCACGCCAGACCGAATACGATTCGTACCGATGCTCCTTGG GAGGTGATCTGGGAGATCATGAGGGAATGGGTGAGACAGAAGTCTCCCATCAGAGAAGGCGCCCTAAAGCCCGGA AGTCCCGGCGCTGTCATTATGTCCAAGAGCAGGGAGAACATTCAAGGCCGTGAGGGGGAAGACCCGTCTCTGGCG CTTCTCAAGACCGAGCTTCAAGCAGTCACAGAGGAAGCAAAAGATGTCAAAGATATGATTACCAAAATTGAAGCT GCCTTGTATCGCTCCGGTGCCCGTCAAGCGTTGGGGAGGAAGAGAAGGGAATCTGATCCTCCGCGTGAACAGCCG GGAACAACGCAGAAGGATCTCCAGGACACAAAGCCTCCCCGTAGCCCCAATGGTGCAGGCAGACCGCACCCTAGC ACGCTGGAGGTTGTATTCGATGAGGCCTTGGGTAGGGAGACGGCCAAGAAGCGACTGGTGCGGTATCAAATTAAT CCTCGTGAGAACTGGGGTCCTCTGAGCCGAGCATCCGGAGGCAAGTAG |