Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g10480.t1
Gene name
Locationscaffold_118:28265..29630
Strand+
Gene length (bp)1365
Transcript length (bp)1125
Coding sequence length (bp)1125
Protein length (aa) 375

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02779 Transket_pyr Transketolase, pyrimidine binding domain 2.5E-45 47 222
PF02780 Transketolase_C Transketolase, C-terminal domain 1.0E-33 241 364

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g10480.t1
MAAPRLFRPAARLLSSRLTSAPLRPQTACAPSILRFRGYATESGTKEVTVRDALNEALAEELESNKKTFILGEEV
AQYNGAYKVTRGLLDRFGPKRVIDTPITEAGFCGLAVGAALAGLHPICEFMTFNFAMQAIDHVINSAAKTHYMSG
GIQPCNITFRGPNGFAAGVAAQHSQDYSAWYGSIPGLKVVAPWSSEDAKGLLKAAIRDPNPVVVLENELLYGQAF
PMSEAAQKDDFVLPIGKAKIERPGKDLTIVTLSRCVGHSLNAAAQLKQKYGVDAEVINLRSVKPLDVETIIQSLK
KTGRIMCVESGFPMFGVSSEILALSMEYGFDYLTAPAVRVTGAEVPTPYAVGLENMSFPQEDTIVSQAAKLLRL*
Coding >Ani_SJS100_1|g10480.t1
ATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCT
CAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGGTCACTGTC
CGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAGAGGAGGTT
GCGCAGTACAACGGAGCTTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACC
CCCATCACGGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGCACCCCATTTGCGAGTTC
ATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATGTCTGGT
GGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCACTCCCAG
GACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCCAAGGGT
CTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCTTGAGAACGAGCTGCTGTACGGTCAGGCTTTC
CCTATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAG
GACTTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTAC
GGTGTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAG
AAGACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCC
ATGGAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCC
GTTGGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAA
Transcript >Ani_SJS100_1|g10480.t1
ATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCT
CAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGGTCACTGTC
CGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAGAGGAGGTT
GCGCAGTACAACGGAGCTTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACC
CCCATCACGGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGCACCCCATTTGCGAGTTC
ATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATGTCTGGT
GGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCACTCCCAG
GACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCCAAGGGT
CTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCTTGAGAACGAGCTGCTGTACGGTCAGGCTTTC
CCTATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAG
GACTTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTAC
GGTGTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAG
AAGACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCC
ATGGAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCC
GTTGGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAA
Gene >Ani_SJS100_1|g10480.t1
ATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCT
CAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGGTCACTGTC
CGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAGAGGAGGTT
GCGCAGTACAACGGAGCGTATGGCACCCTGTCCCCCGTGTGAATTGGCTGCAGTCCATGGATCGCATATCTGAAT
TCGCTCTCCTATAGTTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACCCCC
ATCACGGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGCACCCCATTGTGAGTTCCCCG
ATTTGTGACCTTTGTATATCCCTTTGGATATTTAAGGTTCATCAGATGCAAAGTGCACAGTATACTAAGACTTGC
TGTCGATATTTAGTGCGAGTTCATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAACTCTGCTGC
CAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTTCGCCGCTGG
TGTTGCCGCCCAGCACTCCCAGGACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTG
GAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCTTGAGAACGA
GTACGTGGCCCCCGTGGAAGTATCGGAGTATTTGTGGAATGTTTTTGAACCTGACAATAATTGCATAGGCTGCTG
TACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAAGGCCAAAATT
GAGCGCCCCGGAAAGGACTTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGCTGCCCAG
CTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGTTGAGACCATC
ATCCAGTCGCTCAAGAAGACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTCCTCTGAG
ATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGGCGCCGAGGTC
CCCACCCCCTATGCCGTTGGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGCTGCCAAG
CTGTTGCGCCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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