© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g10455.t1 |
| Gene name | |
| Location | scaffold_117:44333..45317 |
| Strand | - |
| Gene length (bp) | 984 |
| Transcript length (bp) | 855 |
| Coding sequence length (bp) | 855 |
| Protein length (aa) | 285 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04193 | PQ-loop | PQ loop repeat | 1.2E-05 | 14 | 63 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 10 | 32 | 22 |
| 2 | 39 | 61 | 22 |
| 3 | 81 | 103 | 22 |
| 4 | 115 | 137 | 22 |
| 5 | 152 | 174 | 22 |
| 6 | 195 | 217 | 22 |
| 7 | 237 | 259 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10455.t1 MINRTLLPSWVRILLLGLSIISFLPQLQLLWTTKNSSGLSLCYLLFNLICATEQFLLAFLYNNNPEAEPNMFVES PGSLGDWLNLIQITVIWILFSLTFTLSLRYPSDSSFRNKLSAALSYIIYLLIAVIPSVCVVLTTDRGEDPPTSEN EWVFALWSGVHLIFVNPAMTLLAFSAVFCQAPKLRKSVPPPAALSLRGLAIQAGVFSVLALSWPFRFVNINPDWD IFASWFTLYSWYVTVGWTAVDCAIFALVQAILLWMACRNMKYWRLAEGAETEPLLANHE* |
| Coding | >Ani_SJS100_1|g10455.t1 ATGATCAACCGAACACTCCTCCCCTCCTGGGTCCGAATCCTCCTCCTGGGTCTGAGCATCATTTCATTCCTACCG CAGCTGCAACTCCTCTGGACAACCAAGAATAGCTCAGGTCTTTCACTGTGCTATCTACTTTTCAACCTCATCTGT GCGACAGAACAGTTCCTACTTGCATTCTTATACAACAACAACCCGGAGGCAGAGCCGAATATGTTTGTGGAGAGT CCCGGATCCTTAGGAGACTGGTTGAACCTGATTCAAATCACGGTTATCTGGATACTTTTCAGCCTTACATTTACG CTAAGCTTGCGATATCCCTCCGACTCATCCTTCCGAAACAAGCTCTCCGCGGCCTTGTCATATATCATCTACCTT CTCATAGCCGTCATTCCGTCAGTATGCGTGGTCCTCACAACCGATAGAGGCGAGGATCCCCCGACCAGCGAGAAT GAGTGGGTGTTCGCTCTTTGGAGTGGTGTCCATCTCATATTTGTCAACCCGGCCATGACACTTCTCGCATTCAGT GCTGTGTTCTGTCAGGCGCCGAAACTGCGAAAAAGTGTGCCGCCGCCGGCGGCTTTAAGTCTTCGAGGACTTGCG ATCCAGGCAGGCGTGTTCTCGGTACTTGCTTTGAGTTGGCCGTTCCGGTTTGTCAATATCAATCCCGATTGGGAT ATTTTTGCATCGTGGTTTACGCTGTATAGCTGGTATGTGACTGTTGGTTGGACGGCTGTGGACTGTGCGATCTTT GCGCTGGTCCAGGCTATTCTGCTGTGGATGGCTTGCAGAAATATGAAGTACTGGCGGTTAGCTGAGGGGGCGGAG ACGGAGCCGTTACTGGCTAATCATGAATAA |
| Transcript | >Ani_SJS100_1|g10455.t1 ATGATCAACCGAACACTCCTCCCCTCCTGGGTCCGAATCCTCCTCCTGGGTCTGAGCATCATTTCATTCCTACCG CAGCTGCAACTCCTCTGGACAACCAAGAATAGCTCAGGTCTTTCACTGTGCTATCTACTTTTCAACCTCATCTGT GCGACAGAACAGTTCCTACTTGCATTCTTATACAACAACAACCCGGAGGCAGAGCCGAATATGTTTGTGGAGAGT CCCGGATCCTTAGGAGACTGGTTGAACCTGATTCAAATCACGGTTATCTGGATACTTTTCAGCCTTACATTTACG CTAAGCTTGCGATATCCCTCCGACTCATCCTTCCGAAACAAGCTCTCCGCGGCCTTGTCATATATCATCTACCTT CTCATAGCCGTCATTCCGTCAGTATGCGTGGTCCTCACAACCGATAGAGGCGAGGATCCCCCGACCAGCGAGAAT GAGTGGGTGTTCGCTCTTTGGAGTGGTGTCCATCTCATATTTGTCAACCCGGCCATGACACTTCTCGCATTCAGT GCTGTGTTCTGTCAGGCGCCGAAACTGCGAAAAAGTGTGCCGCCGCCGGCGGCTTTAAGTCTTCGAGGACTTGCG ATCCAGGCAGGCGTGTTCTCGGTACTTGCTTTGAGTTGGCCGTTCCGGTTTGTCAATATCAATCCCGATTGGGAT ATTTTTGCATCGTGGTTTACGCTGTATAGCTGGTATGTGACTGTTGGTTGGACGGCTGTGGACTGTGCGATCTTT GCGCTGGTCCAGGCTATTCTGCTGTGGATGGCTTGCAGAAATATGAAGTACTGGCGGTTAGCTGAGGGGGCGGAG ACGGAGCCGTTACTGGCTAATCATGAATAA |
| Gene | >Ani_SJS100_1|g10455.t1 ATGATCAACCGAACACTCCTCCCCTCCTGGGTCCGAATGTACGTAAAAACTTGAGCAATTTGCGATACCGCGCAG AGCTCTTGATGTTGACCCTTTTTAACAGCCTCCTCCTGGGTCTGAGCATCATTTCATTCCTACCGCAGCTGCAAC TCCTCTGGACAACCAAGAATAGCTCAGGTCTTTCACTGTGCTATCTACTTTTCAACCTCATCTGTGCGACAGAAC AGTTCCTACTTGCATTCTTATACAACAACAACCCGGAGGCAGAGCCGAATATGTTTGTGGAGAGTCCCGGATCCT TAGGAGACTGGTTGAACCTGATTCAAATCACGGTTATCTGGATACTTTTCAGCCTTACGTGAGTTTTACATATGC ATCTATCCCCATAAGGGAATCATATACTCATACCAACGCTCCAAAAGATTTACGCTAAGCTTGCGATATCCCTCC GACTCATCCTTCCGAAACAAGCTCTCCGCGGCCTTGTCATATATCATCTACCTTCTCATAGCCGTCATTCCGTCA GTATGCGTGGTCCTCACAACCGATAGAGGCGAGGATCCCCCGACCAGCGAGAATGAGTGGGTGTTCGCTCTTTGG AGTGGTGTCCATCTCATATTTGTCAACCCGGCCATGACACTTCTCGCATTCAGTGCTGTGTTCTGTCAGGCGCCG AAACTGCGAAAAAGTGTGCCGCCGCCGGCGGCTTTAAGTCTTCGAGGACTTGCGATCCAGGCAGGCGTGTTCTCG GTACTTGCTTTGAGTTGGCCGTTCCGGTTTGTCAATATCAATCCCGATTGGGATATTTTTGCATCGTGGTTTACG CTGTATAGCTGGTATGTGACTGTTGGTTGGACGGCTGTGGACTGTGCGATCTTTGCGCTGGTCCAGGCTATTCTG CTGTGGATGGCTTGCAGAAATATGAAGTACTGGCGGTTAGCTGAGGGGGCGGAGACGGAGCCGTTACTGGCTAAT CATGAATAA |