© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g1045.t1 |
| Gene name | |
| Location | scaffold_003:687082..688801 |
| Strand | - |
| Gene length (bp) | 1719 |
| Transcript length (bp) | 867 |
| Coding sequence length (bp) | 867 |
| Protein length (aa) | 289 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.0E-13 | 60 | 228 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 4.6E-05 | 94 | 228 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 111 | 133 | 22 |
| 2 | 148 | 170 | 22 |
| 3 | 182 | 204 | 22 |
| 4 | 208 | 230 | 22 |
| 5 | 251 | 270 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g1045.t1 MGVEYIEFSHAKDGLESQLCNCASSQNLVEVASAEHLRHNATANLAAEWKPGVKEWLVLTCVSLLLTMDAFNATV LLPMITNLLATSEQPLGSTLWIEASYILASAASQPFSAMLAAIFGVGPIALGAAVLATVGTGVCSGSMSLACLVP GRFVQGVGCGGAITTSLLMIDEVIPCPHQARFTGYALQARAVGAIVGLIFGGVLVNHAVWTFYTSFVFCALGLLV IPFAVELRTYKRIAKCKVCELDWQGAVLTFMGMGCLLIDGFHMLWRVMVGASALGGISSLFVK* |
| Coding | >Ani_SJS100_1|g1045.t1 ATGGGAGTTGAATATATTGAATTCAGCCATGCGAAGGATGGCCTGGAGTCGCAACTTTGCAACTGTGCTAGTTCT CAGAACCTGGTCGAGGTTGCTAGTGCAGAGCACCTGCGCCACAATGCCACGGCGAACCTGGCCGCGGAATGGAAA CCCGGTGTTAAAGAATGGCTTGTCCTGACCTGCGTGTCTTTATTGTTGACAATGGATGCGTTCAACGCGACCGTA CTGCTTCCTATGATAACAAATTTATTAGCCACCTCTGAACAGCCACTTGGAAGCACGCTATGGATTGAGGCATCA TATATTCTGGCTAGTGCGGCAAGTCAGCCATTCTCTGCCATGCTCGCAGCCATTTTCGGGGTAGGGCCTATTGCC CTTGGAGCCGCTGTGCTCGCTACAGTGGGAACGGGGGTCTGTAGTGGTTCGATGAGCCTAGCTTGTCTAGTTCCA GGGCGGTTTGTTCAAGGCGTAGGCTGTGGAGGAGCAATCACGACCTCCCTATTGATGATAGATGAAGTCATCCCA TGTCCCCACCAGGCCCGATTTACTGGTTATGCCTTGCAGGCTCGAGCGGTCGGGGCTATTGTTGGCCTTATCTTC GGTGGAGTGCTTGTCAACCATGCTGTCTGGACCTTTTATACCAGTTTCGTCTTCTGCGCACTGGGGCTCTTGGTC ATTCCGTTCGCAGTTGAGTTGCGGACCTACAAGCGTATCGCAAAGTGCAAGGTGTGCGAGCTTGATTGGCAAGGT GCCGTGTTGACCTTTATGGGAATGGGTTGCCTTCTCATAGATGGGTTTCATATGCTATGGCGTGTTATGGTCGGA GCTTCTGCTTTAGGGGGCATTAGCTCGCTGTTTGTGAAATGA |
| Transcript | >Ani_SJS100_1|g1045.t1 ATGGGAGTTGAATATATTGAATTCAGCCATGCGAAGGATGGCCTGGAGTCGCAACTTTGCAACTGTGCTAGTTCT CAGAACCTGGTCGAGGTTGCTAGTGCAGAGCACCTGCGCCACAATGCCACGGCGAACCTGGCCGCGGAATGGAAA CCCGGTGTTAAAGAATGGCTTGTCCTGACCTGCGTGTCTTTATTGTTGACAATGGATGCGTTCAACGCGACCGTA CTGCTTCCTATGATAACAAATTTATTAGCCACCTCTGAACAGCCACTTGGAAGCACGCTATGGATTGAGGCATCA TATATTCTGGCTAGTGCGGCAAGTCAGCCATTCTCTGCCATGCTCGCAGCCATTTTCGGGGTAGGGCCTATTGCC CTTGGAGCCGCTGTGCTCGCTACAGTGGGAACGGGGGTCTGTAGTGGTTCGATGAGCCTAGCTTGTCTAGTTCCA GGGCGGTTTGTTCAAGGCGTAGGCTGTGGAGGAGCAATCACGACCTCCCTATTGATGATAGATGAAGTCATCCCA TGTCCCCACCAGGCCCGATTTACTGGTTATGCCTTGCAGGCTCGAGCGGTCGGGGCTATTGTTGGCCTTATCTTC GGTGGAGTGCTTGTCAACCATGCTGTCTGGACCTTTTATACCAGTTTCGTCTTCTGCGCACTGGGGCTCTTGGTC ATTCCGTTCGCAGTTGAGTTGCGGACCTACAAGCGTATCGCAAAGTGCAAGGTGTGCGAGCTTGATTGGCAAGGT GCCGTGTTGACCTTTATGGGAATGGGTTGCCTTCTCATAGATGGGTTTCATATGCTATGGCGTGTTATGGTCGGA GCTTCTGCTTTAGGGGGCATTAGCTCGCTGTTTGTGAAATGA |
| Gene | >Ani_SJS100_1|g1045.t1 ATGGGAGTTGAATATATTGAATTCAGCCATGCGAAGGATGGCCTGGAGTCGCAACTTTGCAACTGTGCTAGTTCT CAGAACCTGGTCGAGGTTGCTAGTGCAGAGCACCTGCGCCACAATGCCACGGCGAACCTGGCCGCGGAATGGAAA CCCGGTGTTAAAGAATGGCTTGTCCTGACCTGCGTGTCTTTATTGTTGACAATGGATGCGTTCAACGCGACCGTA CTGCTTCCTATGATAACAGTATGTGTGTTGAATATGTCCGTCCCCGTCTAAGCGGCTGATCACCTGATATGGATA GAATTTATTAGCCACCTCTGAACAGCCACTTGGAAGCACGCTATGGATTGAGGCATCATATATTCTGGCTAGTGC GGCAAGTCAGCCATTCTCTGCCATGCTCGCAGCCATTTTCGGGGTAGGGCCTATTGCCCTTGGAGCCGCTGTGCT CGCTACAGTGGGAACGGGGGTCTGTAGTGGTTCGATGAGCCTAGCTTGTCTAGTTCCAGGGCGGTTTGTTCAAGG CGTAGGCTGTGGAGGAGCAATCACGACCTCCCTATTGATGATAGATGAAGTCATCCCATGTCCCCACCAGGCCCG ATTTACTGGTTATGCCTTGCAGGCTCGAGCGGTCGGGGCTATTGTTGGCCTTATCTTCGGTGGAGTGCTTGTCAA CCATGCTGTCTGGACCTTTTATACCAGTTTCGTCTTCTGCGCACTGGGGCTCTTGGTCATTCCGTTCGCAGTTGA GTTGCGGACCTACAAGCGTATCGCAAAGTGCAAGGTGTGCGAGCTTGATTGGCAAGGTGCCGTGTTGACCTTTAT GGGAATGGGTTGCCTTCTCATAGGTATCAACTGGGGCGGGATACTATATGAGTGGAGTAACTGGCACGTACTGGT AGTTCTTGGTGCTGGGGCAGCCTCGATCATCGTCTTAGTCCTGTACGAGAGTCTGTGGTCCATCCACCCGCTTTT CTCTTCGGCAGTATTCAGCGACATCGCAAGGTCTATGTTGTACCTAGGTAGCTTGCTGCACGGATTTTTGGTAAG TCATCAGCGTATGGTAATGGAGAAAACACTACTGACTTGCAATAGTTATCCTGCCATCTCGTCAACTGTGCCTTG TATCTAAGACTGGTTCAAGACTTATCGTCTGCATTCGAAGGGCTCAGCCTCCTCACCGTCGTCAGTCCAGCATTA TTAGCACTTATTCTGACAGAAAAGGTGAGACTGTTGCGAGGCCCGAGCGCCTTTCCCTGGATGGTCCGGATCGGA TGGTTTTGCAGCGTCCTCGCGACAGGCTTCTTCATTATCCTAGACGTCAGCACTCCACCTCAAGCATGGGTTTTT ATCTTGCTTGGTGGAGGCATGGGTCACTCCTTGCTTATATCCGGGTACCATCGAGGCGTCCACTATATACACCAG CCAAGCAGAGATAATGAGCACTACCCAGCATCAGGCATCCTCATGTATTCTCTTCTGCGGACATGGGGGATGTGT ATTGCTGTCCCTGTGAGCGGAGCGATCATCTTGAATCGAATGTTTAGGGAGGAGGGTACAGAGGAAAGCATGAAT TTTGATGTTCAAGCAGGCGGATCCTCTTTATCGCAGCAGGGCAGATCTCAGAAACTGATGCTTGTAGATGGGTTT CATATGCTATGGCGTGTTATGGTCGGAGCTTCTGCTTTAGGGGGCATTAGCTCGCTGTTTGTGAAATGA |