Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g1043.t1
Gene name
Locationscaffold_003:683748..685105
Strand+
Gene length (bp)1357
Transcript length (bp)1140
Coding sequence length (bp)1140
Protein length (aa) 380

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00544 Pectate_lyase_4 Pectate lyase 7.6E-12 124 296

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g1043.t1
MKYSTIFSAAAAVFAGSAAAVGVSGSAEGFAEGVTGGGDATPVYPDTIDELVSYLGDDEARVIVLTKTFDFTDSE
GTTTGTGCAPWGTASACQVAIDQDDWCENYEPDAPSVSVEYYNAGVLGITVTSNKSLIGEGSSGAIKGKGLRIVS
GAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSAT
CDGYHYWGIYLDGDADLVTMKGNYIYHTSGRSPKVQDNTLLHCVNNYFYDISGHAFEIGEGGYVLAEGNVFQNVD
TVLETYEGAAFTVPSTTAGEVCSTYLGRDCVINGFGSSGTFSEDSTSFLSDFEGKNIASASAYTSVASSVVANAG
QGNL*
Coding >Ani_SJS100_1|g1043.t1
ATGAAGTACTCTACTATCTTCAGCGCTGCTGCCGCTGTTTTCGCTGGTTCCGCCGCTGCAGTCGGCGTGTCCGGC
TCTGCTGAGGGTTTCGCCGAGGGCGTCACCGGTGGCGGTGATGCCACCCCCGTCTACCCCGACACTATCGATGAG
CTGGTCTCTTACCTTGGAGACGATGAGGCCCGCGTCATTGTCCTGACCAAGACCTTCGACTTCACCGACAGCGAA
GGTACCACCACTGGCACTGGTTGCGCTCCCTGGGGTACCGCTTCCGCCTGCCAGGTTGCTATTGACCAGGACGAC
TGGTGCGAGAACTACGAGCCCGATGCTCCCTCTGTCAGCGTTGAATACTACAACGCTGGTGTCCTCGGTATCACC
GTCACCTCCAACAAGTCCCTCATCGGTGAGGGCTCCTCTGGTGCAATCAAGGGCAAGGGTCTCCGTATTGTCAGC
GGTGCTGAGAACATCATCATCCAGAACATCGCGGTTACCGACATCAACCCCAAGTACGTCTGGGGTGGTGATGCT
ATTACTCTTGATGACTGCGACCTGGTCTGGATCGACCATGTTACTACCGCCCGCATCGGTCGCCAGCACTACGTC
CTTGGAACCAGCGCCGACAACCGCGTCTCTCTCACCAACAACTACATTGACGGTGTCTCCGACTACTCCGCCACC
TGCGATGGCTACCACTACTGGGGCATCTACCTCGATGGTGACGCCGACTTGGTCACCATGAAGGGCAACTACATC
TACCACACCTCCGGCCGTAGCCCCAAGGTCCAGGACAACACTCTCCTCCACTGTGTCAACAACTACTTCTACGAC
ATCTCCGGCCACGCTTTTGAGATCGGTGAGGGTGGCTACGTCCTGGCTGAGGGCAACGTTTTCCAGAACGTCGAC
ACCGTCCTTGAGACCTACGAGGGCGCGGCCTTCACCGTCCCCTCCACCACCGCCGGTGAAGTCTGCTCCACCTAC
CTTGGCCGTGACTGTGTCATCAACGGCTTCGGCTCCTCCGGCACTTTCTCCGAGGACAGCACCTCTTTCCTCTCC
GACTTCGAGGGCAAGAACATTGCCTCTGCTTCCGCTTACACCTCTGTTGCCTCTAGCGTTGTTGCTAACGCCGGT
CAGGGCAACCTGTAA
Transcript >Ani_SJS100_1|g1043.t1
ATGAAGTACTCTACTATCTTCAGCGCTGCTGCCGCTGTTTTCGCTGGTTCCGCCGCTGCAGTCGGCGTGTCCGGC
TCTGCTGAGGGTTTCGCCGAGGGCGTCACCGGTGGCGGTGATGCCACCCCCGTCTACCCCGACACTATCGATGAG
CTGGTCTCTTACCTTGGAGACGATGAGGCCCGCGTCATTGTCCTGACCAAGACCTTCGACTTCACCGACAGCGAA
GGTACCACCACTGGCACTGGTTGCGCTCCCTGGGGTACCGCTTCCGCCTGCCAGGTTGCTATTGACCAGGACGAC
TGGTGCGAGAACTACGAGCCCGATGCTCCCTCTGTCAGCGTTGAATACTACAACGCTGGTGTCCTCGGTATCACC
GTCACCTCCAACAAGTCCCTCATCGGTGAGGGCTCCTCTGGTGCAATCAAGGGCAAGGGTCTCCGTATTGTCAGC
GGTGCTGAGAACATCATCATCCAGAACATCGCGGTTACCGACATCAACCCCAAGTACGTCTGGGGTGGTGATGCT
ATTACTCTTGATGACTGCGACCTGGTCTGGATCGACCATGTTACTACCGCCCGCATCGGTCGCCAGCACTACGTC
CTTGGAACCAGCGCCGACAACCGCGTCTCTCTCACCAACAACTACATTGACGGTGTCTCCGACTACTCCGCCACC
TGCGATGGCTACCACTACTGGGGCATCTACCTCGATGGTGACGCCGACTTGGTCACCATGAAGGGCAACTACATC
TACCACACCTCCGGCCGTAGCCCCAAGGTCCAGGACAACACTCTCCTCCACTGTGTCAACAACTACTTCTACGAC
ATCTCCGGCCACGCTTTTGAGATCGGTGAGGGTGGCTACGTCCTGGCTGAGGGCAACGTTTTCCAGAACGTCGAC
ACCGTCCTTGAGACCTACGAGGGCGCGGCCTTCACCGTCCCCTCCACCACCGCCGGTGAAGTCTGCTCCACCTAC
CTTGGCCGTGACTGTGTCATCAACGGCTTCGGCTCCTCCGGCACTTTCTCCGAGGACAGCACCTCTTTCCTCTCC
GACTTCGAGGGCAAGAACATTGCCTCTGCTTCCGCTTACACCTCTGTTGCCTCTAGCGTTGTTGCTAACGCCGGT
CAGGGCAACCTGTAA
Gene >Ani_SJS100_1|g1043.t1
ATGAAGTACTCTACTATCTTCAGCGCTGCTGCCGCTGTTTTCGCTGGTTCCGCCGCTGCAGTCGGCGTGTCCGGC
TCTGCTGAGGGTTTCGCCGAGGGCGTCACCGGTGGCGGTGATGCCACCCCCGTCTACCCCGACACTATCGATGAG
CTGGTCTCTTACCTTGGAGACGATGAGGCCCGCGTCATTGTCCTGACCAAGACCTTCGACTTCACCGACAGCGAA
GGTACCACCACTGGCACTGGTTGCGCTCCCTGGGGTACCGCTTCCGCCTGCCAGGTTGCTATTGACCAGGACGAC
TGGTGCGAGAACTACGAGCCCGATGCTCCCTCTGTCAGCGTTGAATAGTATGTCCTTGGGGATTGTCACCCGTTT
CGATCTTGTATCTAACTTGGATAGCTACAACGCTGGTGTCCTCGGTATCACCGTCACCTCCAACAAGTCCCTCAT
CGGTGAGGGCTCCTCTGGTGCAATCAAGGGCAAGGGTCTCCGTATTGTCAGCGGTGCTGAGAACATCATCATCCA
GTAGGTTATGCTCGGTGTCATTAGGAATTTGCTCTCTAACGAAATCAGGAACATCGCGGTTACCGACATCAACCC
CAAGTACGTCTGGGGTGGTGATGCTATTACTCTTGATGACTGCGACCTGGTCTGGATCGACCATGTTACTGTACG
TCTTCATCTTATTCAACTCTACATTATATTTCAAGAGCATTGAGTTAACATATGACAGACCGCCCGCATCGGTCG
CCAGCACTACGTCCTTGGAACCAGCGCCGACAACCGCGTCTCTCTCACCAACAACTACATTGACGGTGTCTCCGA
CTACTCCGCCACCTGCGATGGCTACCACTACTGGGGCATCTACCTCGATGGTGACGCCGACTTGGTCACCATGAA
GGGCAACTACATCTACCACACCTCCGGCCGTAGCCCCAAGGTCCAGGACAACACTCTCCTCCACTGTGTAAGTTG
CCTTTTCTCTGCTGGCCGCTTCCGACCTGACTAATCATTGTTGCAGGTCAACAACTACTTCTACGACATCTCCGG
CCACGCTTTTGAGATCGGTGAGGGTGGCTACGTCCTGGCTGAGGGCAACGTTTTCCAGAACGTCGACACCGTCCT
TGAGACCTACGAGGGCGCGGCCTTCACCGTCCCCTCCACCACCGCCGGTGAAGTCTGCTCCACCTACCTTGGCCG
TGACTGTGTCATCAACGGCTTCGGCTCCTCCGGCACTTTCTCCGAGGACAGCACCTCTTTCCTCTCCGACTTCGA
GGGCAAGAACATTGCCTCTGCTTCCGCTTACACCTCTGTTGCCTCTAGCGTTGTTGCTAACGCCGGTCAGGGCAA
CCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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