© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g10427.t1 |
| Gene name | |
| Location | scaffold_116:53494..54454 |
| Strand | + |
| Gene length (bp) | 960 |
| Transcript length (bp) | 858 |
| Coding sequence length (bp) | 858 |
| Protein length (aa) | 286 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13391 | HNH_2 | HNH endonuclease | 5.9E-15 | 67 | 180 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 27 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g10427.t1 MFIKGALESFAENIVDNFLLPLRASSSKTPQVTPAALSLSQTPTPLGTRQRVSVLRKDCLVRDHHRCVISRKFDI VEARKRNAEDGDNCKDDNGNLLSSSSRGEFQYLEVAHILPYSLTTLAQGESELSEAKRKVFRILDMFDPGLSHRL DGPNIDRPINALTLTLDYHRLFSGFQIYFEPTGRPHEYKIDSLEESTFLRDPFFPVTRTLSLSPNQSIDSPDPRL LRVHCAIAHIMKLSGAGDYIEKVLRDMQEVEVKADGSTNLGYLMGLRLNGWLTTLSDLHA* |
| Coding | >Ani_SJS100_1|g10427.t1 ATGTTCATAAAGGGTGCTCTCGAAAGTTTTGCTGAGAATATTGTTGACAACTTCCTTCTTCCACTCAGGGCTTCG TCAAGTAAGACCCCACAAGTAACACCAGCAGCATTGTCCTTGAGTCAGACACCTACACCATTGGGCACGAGACAG CGTGTATCTGTCTTACGGAAAGATTGTCTTGTACGTGATCACCACCGGTGCGTGATATCCCGCAAATTTGATATC GTCGAAGCCAGGAAGCGCAACGCCGAGGATGGTGATAATTGTAAAGATGACAATGGAAACCTCTTGAGCAGTAGC TCACGGGGCGAATTCCAGTATCTGGAAGTTGCGCACATCCTTCCTTACAGTTTGACAACATTGGCGCAGGGAGAG TCAGAGTTGAGCGAGGCAAAAAGGAAGGTGTTTCGAATACTGGATATGTTTGACCCTGGGCTCAGTCACCGTCTT GATGGCCCGAACATCGATAGACCCATCAATGCTCTTACACTGACGCTTGATTATCATCGACTGTTTAGTGGATTC CAAATTTATTTCGAGCCCACAGGAAGGCCACATGAATATAAGATCGACTCGCTTGAAGAGAGTACCTTCCTGCGC GACCCGTTCTTCCCCGTCACTCGTACTCTGAGCCTTAGTCCTAACCAGTCGATTGATTCACCAGACCCCAGACTT CTCCGTGTCCACTGCGCCATTGCACATATTATGAAACTCAGCGGGGCCGGCGACTATATCGAGAAAGTCCTGCGT GACATGCAGGAGGTGGAAGTTAAAGCTGATGGCTCAACAAATCTAGGTTATTTAATGGGTTTGCGACTCAACGGT TGGTTAACGACTCTTTCAGACCTGCATGCATAA |
| Transcript | >Ani_SJS100_1|g10427.t1 ATGTTCATAAAGGGTGCTCTCGAAAGTTTTGCTGAGAATATTGTTGACAACTTCCTTCTTCCACTCAGGGCTTCG TCAAGTAAGACCCCACAAGTAACACCAGCAGCATTGTCCTTGAGTCAGACACCTACACCATTGGGCACGAGACAG CGTGTATCTGTCTTACGGAAAGATTGTCTTGTACGTGATCACCACCGGTGCGTGATATCCCGCAAATTTGATATC GTCGAAGCCAGGAAGCGCAACGCCGAGGATGGTGATAATTGTAAAGATGACAATGGAAACCTCTTGAGCAGTAGC TCACGGGGCGAATTCCAGTATCTGGAAGTTGCGCACATCCTTCCTTACAGTTTGACAACATTGGCGCAGGGAGAG TCAGAGTTGAGCGAGGCAAAAAGGAAGGTGTTTCGAATACTGGATATGTTTGACCCTGGGCTCAGTCACCGTCTT GATGGCCCGAACATCGATAGACCCATCAATGCTCTTACACTGACGCTTGATTATCATCGACTGTTTAGTGGATTC CAAATTTATTTCGAGCCCACAGGAAGGCCACATGAATATAAGATCGACTCGCTTGAAGAGAGTACCTTCCTGCGC GACCCGTTCTTCCCCGTCACTCGTACTCTGAGCCTTAGTCCTAACCAGTCGATTGATTCACCAGACCCCAGACTT CTCCGTGTCCACTGCGCCATTGCACATATTATGAAACTCAGCGGGGCCGGCGACTATATCGAGAAAGTCCTGCGT GACATGCAGGAGGTGGAAGTTAAAGCTGATGGCTCAACAAATCTAGGTTATTTAATGGGTTTGCGACTCAACGGT TGGTTAACGACTCTTTCAGACCTGCATGCATAA |
| Gene | >Ani_SJS100_1|g10427.t1 ATGTTCATAAAGGGTGCTCTCGAAAGTTTTGCTGAGAATATTGTTGACAACTTCCTTCTTCCACGTATGAATGTC CCTTGTCCTTTGAACCTGCTGATCTGCTAATGCGGTCACTTAGTCAGGGCTTCGTCAAGTAAGACCCCACAAGTA ACACCAGCAGCATTGTCCTTGAGTCAGACACCTACACCATTGGGCACGAGACAGCGTGTATCTGTCTTACGGAAA GATTGTCTTGTACGTGATCACCACCGGTGCGTGATATCCCGCAAATTTGATATCGTCGAAGCCAGGAAGCGCAAC GCCGAGGATGGTGATAATTGTAAAGATGACAATGGAAACCTCTTGAGCAGTAGCTCACGGGGCGAATTCCAGTAT CTGGAAGTTGCGCACATCCTTCCTTACAGTTTGACAACATTGGCGCAGGGAGAGTCAGAGTTGGTACGTTTATCA ATAATCATCTACTGGCTGCATATTAACCTTTCCAAGAGCGAGGCAAAAAGGAAGGTGTTTCGAATACTGGATATG TTTGACCCTGGGCTCAGTCACCGTCTTGATGGCCCGAACATCGATAGACCCATCAATGCTCTTACACTGACGCTT GATTATCATCGACTGTTTAGTGGATTCCAAATTTATTTCGAGCCCACAGGAAGGCCACATGAATATAAGATCGAC TCGCTTGAAGAGAGTACCTTCCTGCGCGACCCGTTCTTCCCCGTCACTCGTACTCTGAGCCTTAGTCCTAACCAG TCGATTGATTCACCAGACCCCAGACTTCTCCGTGTCCACTGCGCCATTGCACATATTATGAAACTCAGCGGGGCC GGCGACTATATCGAGAAAGTCCTGCGTGACATGCAGGAGGTGGAAGTTAAAGCTGATGGCTCAACAAATCTAGGT TATTTAATGGGTTTGCGACTCAACGGTTGGTTAACGACTCTTTCAGACCTGCATGCATAA |