Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g10397.t1
Gene name
Locationscaffold_115:61935..63249
Strand-
Gene length (bp)1314
Transcript length (bp)1314
Coding sequence length (bp)1314
Protein length (aa) 438

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10253 PRCC Mitotic checkpoint regulator, MAD2B-interacting 2.2E-44 263 437

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g10397.t1
MALVAYSDSEASDSEPETTAPQPQQAPKKPTTSTTATTSNTNTNNKPPIQPLVDRTNPRKIRVALPDVKPEHNDD
TDGPRKKPKLGGGGGAFSGFNSFLPAPKKTATTASSNASEKKAPARKIFSLKTGAAPGFDREADAEMRNERAFGA
LGGDGDEDETIPKAGSMRDKELDFGKDSEDQKEEAVPQMKKPEEVKLKGNPMMFKPLSVGRAQQKKRKAVSDLMP
AAAAVRRKENVSTASSASASVQETPTAAAPAPPKPKISLFSLSANDDSTPTTSTAPSATTYEPLVYTPLNTAPAG
PSPAPEDTTTTTTTTTTQQSTYQPASTTSDNTLSTIADDLNLSKAQRRQLFGRNAPESVAASSRVLHFNTDQEYV
TNQELAHTELAAQQHNPVRAIAPGKHTLQQLVNAASTQREALEESFAAGRRNKREAGAKYGW*
Coding >Ani_SJS100_1|g10397.t1
ATGGCCCTGGTCGCCTACTCCGACTCAGAAGCCTCCGACTCGGAGCCCGAAACCACCGCCCCCCAACCCCAACAA
GCCCCCAAGAAACCCACCACCTCAACAACCGCAACCACCAGCAATACCAACACCAACAACAAACCCCCCATCCAA
CCCCTCGTCGACCGCACCAACCCGCGCAAAATCCGCGTCGCATTACCAGACGTCAAACCCGAACACAACGACGAC
ACTGATGGCCCGCGCAAGAAACCCAAACTAGGCGGCGGAGGCGGTGCATTCTCCGGCTTTAACTCGTTTCTACCT
GCGCCAAAGAAAACAGCTACCACCGCAAGCAGCAATGCTTCAGAGAAGAAGGCGCCCGCGCGCAAGATATTCAGT
CTGAAGACGGGCGCAGCGCCGGGGTTCGATCGCGAGGCGGATGCGGAGATGCGAAATGAGCGGGCGTTTGGGGCG
TTAGGAGGAGATGGAGATGAAGATGAGACGATACCCAAGGCGGGGAGTATGAGAGATAAGGAATTGGATTTCGGG
AAGGATAGTGAAGACCAAAAGGAGGAGGCTGTGCCGCAGATGAAGAAGCCAGAGGAAGTCAAGTTGAAGGGCAAC
CCGATGATGTTCAAGCCGTTGTCTGTAGGGAGGGCGCAGCAGAAGAAGAGGAAAGCTGTTTCGGATTTGATGCCT
GCTGCTGCGGCTGTACGGAGGAAGGAGAATGTGTCGACAGCTTCATCTGCATCTGCATCTGTTCAGGAGACACCT
ACAGCTGCAGCGCCAGCACCACCCAAACCCAAAATCAGCCTCTTCTCACTCTCCGCCAACGACGACTCTACACCC
ACCACATCGACAGCACCATCAGCAACAACCTACGAGCCCCTAGTCTACACCCCCCTCAATACTGCCCCCGCCGGC
CCCTCCCCCGCCCCCGAAGACACCACCACCACCACCACCACCACCACCACACAGCAATCCACATACCAACCCGCC
TCAACAACATCAGACAACACCCTCAGCACCATCGCCGACGACCTCAACCTCTCCAAAGCCCAACGGCGCCAACTA
TTCGGCCGCAATGCCCCCGAATCCGTGGCAGCCAGTTCCCGTGTCCTGCACTTCAACACGGACCAAGAGTACGTC
ACGAACCAGGAGCTTGCGCACACGGAGCTGGCGGCGCAGCAGCATAACCCCGTCAGGGCCATTGCGCCGGGTAAG
CATACACTGCAGCAGTTGGTTAATGCGGCGAGTACGCAGCGCGAGGCGCTGGAGGAGAGCTTTGCTGCTGGGAGG
AGGAATAAGAGGGAGGCGGGAGCGAAGTATGGGTGGTAA
Transcript >Ani_SJS100_1|g10397.t1
ATGGCCCTGGTCGCCTACTCCGACTCAGAAGCCTCCGACTCGGAGCCCGAAACCACCGCCCCCCAACCCCAACAA
GCCCCCAAGAAACCCACCACCTCAACAACCGCAACCACCAGCAATACCAACACCAACAACAAACCCCCCATCCAA
CCCCTCGTCGACCGCACCAACCCGCGCAAAATCCGCGTCGCATTACCAGACGTCAAACCCGAACACAACGACGAC
ACTGATGGCCCGCGCAAGAAACCCAAACTAGGCGGCGGAGGCGGTGCATTCTCCGGCTTTAACTCGTTTCTACCT
GCGCCAAAGAAAACAGCTACCACCGCAAGCAGCAATGCTTCAGAGAAGAAGGCGCCCGCGCGCAAGATATTCAGT
CTGAAGACGGGCGCAGCGCCGGGGTTCGATCGCGAGGCGGATGCGGAGATGCGAAATGAGCGGGCGTTTGGGGCG
TTAGGAGGAGATGGAGATGAAGATGAGACGATACCCAAGGCGGGGAGTATGAGAGATAAGGAATTGGATTTCGGG
AAGGATAGTGAAGACCAAAAGGAGGAGGCTGTGCCGCAGATGAAGAAGCCAGAGGAAGTCAAGTTGAAGGGCAAC
CCGATGATGTTCAAGCCGTTGTCTGTAGGGAGGGCGCAGCAGAAGAAGAGGAAAGCTGTTTCGGATTTGATGCCT
GCTGCTGCGGCTGTACGGAGGAAGGAGAATGTGTCGACAGCTTCATCTGCATCTGCATCTGTTCAGGAGACACCT
ACAGCTGCAGCGCCAGCACCACCCAAACCCAAAATCAGCCTCTTCTCACTCTCCGCCAACGACGACTCTACACCC
ACCACATCGACAGCACCATCAGCAACAACCTACGAGCCCCTAGTCTACACCCCCCTCAATACTGCCCCCGCCGGC
CCCTCCCCCGCCCCCGAAGACACCACCACCACCACCACCACCACCACCACACAGCAATCCACATACCAACCCGCC
TCAACAACATCAGACAACACCCTCAGCACCATCGCCGACGACCTCAACCTCTCCAAAGCCCAACGGCGCCAACTA
TTCGGCCGCAATGCCCCCGAATCCGTGGCAGCCAGTTCCCGTGTCCTGCACTTCAACACGGACCAAGAGTACGTC
ACGAACCAGGAGCTTGCGCACACGGAGCTGGCGGCGCAGCAGCATAACCCCGTCAGGGCCATTGCGCCGGGTAAG
CATACACTGCAGCAGTTGGTTAATGCGGCGAGTACGCAGCGCGAGGCGCTGGAGGAGAGCTTTGCTGCTGGGAGG
AGGAATAAGAGGGAGGCGGGAGCGAAGTATGGGTGGTAA
Gene >Ani_SJS100_1|g10397.t1
ATGGCCCTGGTCGCCTACTCCGACTCAGAAGCCTCCGACTCGGAGCCCGAAACCACCGCCCCCCAACCCCAACAA
GCCCCCAAGAAACCCACCACCTCAACAACCGCAACCACCAGCAATACCAACACCAACAACAAACCCCCCATCCAA
CCCCTCGTCGACCGCACCAACCCGCGCAAAATCCGCGTCGCATTACCAGACGTCAAACCCGAACACAACGACGAC
ACTGATGGCCCGCGCAAGAAACCCAAACTAGGCGGCGGAGGCGGTGCATTCTCCGGCTTTAACTCGTTTCTACCT
GCGCCAAAGAAAACAGCTACCACCGCAAGCAGCAATGCTTCAGAGAAGAAGGCGCCCGCGCGCAAGATATTCAGT
CTGAAGACGGGCGCAGCGCCGGGGTTCGATCGCGAGGCGGATGCGGAGATGCGAAATGAGCGGGCGTTTGGGGCG
TTAGGAGGAGATGGAGATGAAGATGAGACGATACCCAAGGCGGGGAGTATGAGAGATAAGGAATTGGATTTCGGG
AAGGATAGTGAAGACCAAAAGGAGGAGGCTGTGCCGCAGATGAAGAAGCCAGAGGAAGTCAAGTTGAAGGGCAAC
CCGATGATGTTCAAGCCGTTGTCTGTAGGGAGGGCGCAGCAGAAGAAGAGGAAAGCTGTTTCGGATTTGATGCCT
GCTGCTGCGGCTGTACGGAGGAAGGAGAATGTGTCGACAGCTTCATCTGCATCTGCATCTGTTCAGGAGACACCT
ACAGCTGCAGCGCCAGCACCACCCAAACCCAAAATCAGCCTCTTCTCACTCTCCGCCAACGACGACTCTACACCC
ACCACATCGACAGCACCATCAGCAACAACCTACGAGCCCCTAGTCTACACCCCCCTCAATACTGCCCCCGCCGGC
CCCTCCCCCGCCCCCGAAGACACCACCACCACCACCACCACCACCACCACACAGCAATCCACATACCAACCCGCC
TCAACAACATCAGACAACACCCTCAGCACCATCGCCGACGACCTCAACCTCTCCAAAGCCCAACGGCGCCAACTA
TTCGGCCGCAATGCCCCCGAATCCGTGGCAGCCAGTTCCCGTGTCCTGCACTTCAACACGGACCAAGAGTACGTC
ACGAACCAGGAGCTTGCGCACACGGAGCTGGCGGCGCAGCAGCATAACCCCGTCAGGGCCATTGCGCCGGGTAAG
CATACACTGCAGCAGTTGGTTAATGCGGCGAGTACGCAGCGCGAGGCGCTGGAGGAGAGCTTTGCTGCTGGGAGG
AGGAATAAGAGGGAGGCGGGAGCGAAGTATGGGTGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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