Protein ID | Ani_SJS100_1|g10392.t1 |
Gene name | |
Location | scaffold_115:38159..39817 |
Strand | - |
Gene length (bp) | 1658 |
Transcript length (bp) | 1596 |
Coding sequence length (bp) | 1596 |
Protein length (aa) | 532 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02582 | DUF155 | RMND1/Sif2-Sif3/Mrx10, DUF155 | 4.0E-51 | 306 | 477 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 502 | 524 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 741 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g10392.t1 MVTTESSPLLPQHHLPNPSNTSPRGNRPPRTVTFNPLATVSTYHDSTSADPTFRPLQSGSSSAPHSQESHYRPTG LSALNSKLRRRNSHGAPFSTANTPIAAAPKVGPQRTTKNAQKLKLLPDPVTEAEEELGGDDFPSDVYSQIARIKE PTARSHAAKLGKADRERLPRVTAYCTANSYRLEGIIKFLKSRSKTRGANPKLYDECVYSPYDYGYEEKQNGTWGL SNNGMGMADSHPGQRPSNERRYSDSVVEVQDNTNARREDLIDLRDSQSHSTDIDHASSTAVSENQGDVHPDFDTT IHTPEVFLFDYGTVVIWGMSPAHESRFLSDVSKFAASILSPEDTQVENFNFYYAREYQARIYNDFISLRDPRNHM IKLAISHALAQSVKTSLFEDLVSETISNTAPLPAQIAQTGSVNLTRRQINMQIGELFILRINIHLQGSVLDSPEL MWAEPQLEPVYQAVRSYLEMDQRVSLLTERLDVIADLLAVLKDQLTHRHGEYLEWIVIVLIAAEILVAAINIVVD LYAGVE* |
Coding | >Ani_SJS100_1|g10392.t1 ATGGTCACCACAGAATCCTCTCCGCTCCTCCCCCAGCATCATCTCCCGAATCCCTCCAATACGTCACCGCGAGGA AACCGTCCGCCGCGGACAGTGACCTTCAACCCATTGGCGACTGTCAGCACTTACCATGACTCGACCTCCGCCGAT CCCACGTTTAGACCTCTCCAGTCCGGCTCCTCATCTGCACCGCATTCTCAGGAGAGCCATTACCGACCGACCGGC CTCTCCGCCCTGAATAGCAAGCTCCGCCGGCGGAACAGCCATGGCGCTCCGTTCAGCACCGCAAACACCCCAATC GCTGCAGCCCCCAAAGTCGGACCGCAAAGAACGACGAAAAATGCCCAAAAACTCAAACTGCTTCCCGATCCGGTG ACTGAGGCCGAGGAGGAGCTCGGTGGAGATGACTTTCCGTCCGATGTCTATTCGCAGATTGCCCGGATCAAAGAA CCCACGGCGAGGAGTCATGCTGCAAAGTTAGGAAAGGCCGACAGAGAGCGTCTGCCGCGAGTGACTGCCTACTGC ACAGCCAATTCTTATCGACTGGAGGGGATAATCAAGTTTCTCAAGTCTCGTTCTAAAACCCGCGGGGCCAACCCG AAGCTCTACGACGAATGTGTCTACTCTCCATATGACTACGGCTATGAGGAAAAGCAGAATGGCACATGGGGTCTT TCGAATAATGGAATGGGCATGGCGGATAGTCACCCTGGTCAACGGCCGTCCAATGAGCGCCGCTACTCGGACAGT GTGGTTGAGGTTCAGGATAACACCAATGCTCGACGGGAAGACCTCATAGATCTACGGGACTCTCAATCCCACTCC ACCGATATAGATCACGCTTCGAGTACTGCTGTGTCAGAAAACCAAGGAGATGTACATCCCGACTTCGACACGACG ATCCATACCCCTGAAGTGTTTCTCTTTGATTACGGCACAGTCGTCATATGGGGCATGTCACCTGCACACGAGTCA CGATTCTTATCCGATGTTTCCAAATTTGCCGCTTCCATCCTCAGCCCCGAAGATACCCAGGTTGAGAACTTCAAT TTCTACTATGCTCGCGAATATCAAGCCCGGATATACAACGACTTTATCTCTCTGCGCGATCCGCGTAACCACATG ATCAAACTGGCCATCTCCCACGCATTGGCTCAATCCGTCAAGACCTCCCTATTCGAAGACCTCGTATCCGAGACC ATCTCCAACACCGCACCCCTACCCGCCCAGATCGCCCAGACAGGAAGTGTCAACCTCACCCGCCGCCAGATCAAC ATGCAAATCGGCGAATTGTTCATCCTCCGGATCAACATTCACCTGCAAGGCTCGGTTCTAGACTCTCCAGAACTT ATGTGGGCCGAGCCCCAACTAGAACCGGTTTACCAGGCCGTCCGCAGTTACCTTGAAATGGACCAGCGCGTAAGC CTGCTCACCGAACGACTGGACGTAATAGCGGATCTTCTCGCCGTCCTCAAAGATCAATTAACTCACCGCCACGGT GAGTATCTTGAATGGATCGTAATTGTTCTTATTGCGGCAGAAATTCTGGTCGCAGCTATCAACATCGTAGTTGAC TTGTACGCTGGCGTGGAGTGA |
Transcript | >Ani_SJS100_1|g10392.t1 ATGGTCACCACAGAATCCTCTCCGCTCCTCCCCCAGCATCATCTCCCGAATCCCTCCAATACGTCACCGCGAGGA AACCGTCCGCCGCGGACAGTGACCTTCAACCCATTGGCGACTGTCAGCACTTACCATGACTCGACCTCCGCCGAT CCCACGTTTAGACCTCTCCAGTCCGGCTCCTCATCTGCACCGCATTCTCAGGAGAGCCATTACCGACCGACCGGC CTCTCCGCCCTGAATAGCAAGCTCCGCCGGCGGAACAGCCATGGCGCTCCGTTCAGCACCGCAAACACCCCAATC GCTGCAGCCCCCAAAGTCGGACCGCAAAGAACGACGAAAAATGCCCAAAAACTCAAACTGCTTCCCGATCCGGTG ACTGAGGCCGAGGAGGAGCTCGGTGGAGATGACTTTCCGTCCGATGTCTATTCGCAGATTGCCCGGATCAAAGAA CCCACGGCGAGGAGTCATGCTGCAAAGTTAGGAAAGGCCGACAGAGAGCGTCTGCCGCGAGTGACTGCCTACTGC ACAGCCAATTCTTATCGACTGGAGGGGATAATCAAGTTTCTCAAGTCTCGTTCTAAAACCCGCGGGGCCAACCCG AAGCTCTACGACGAATGTGTCTACTCTCCATATGACTACGGCTATGAGGAAAAGCAGAATGGCACATGGGGTCTT TCGAATAATGGAATGGGCATGGCGGATAGTCACCCTGGTCAACGGCCGTCCAATGAGCGCCGCTACTCGGACAGT GTGGTTGAGGTTCAGGATAACACCAATGCTCGACGGGAAGACCTCATAGATCTACGGGACTCTCAATCCCACTCC ACCGATATAGATCACGCTTCGAGTACTGCTGTGTCAGAAAACCAAGGAGATGTACATCCCGACTTCGACACGACG ATCCATACCCCTGAAGTGTTTCTCTTTGATTACGGCACAGTCGTCATATGGGGCATGTCACCTGCACACGAGTCA CGATTCTTATCCGATGTTTCCAAATTTGCCGCTTCCATCCTCAGCCCCGAAGATACCCAGGTTGAGAACTTCAAT TTCTACTATGCTCGCGAATATCAAGCCCGGATATACAACGACTTTATCTCTCTGCGCGATCCGCGTAACCACATG ATCAAACTGGCCATCTCCCACGCATTGGCTCAATCCGTCAAGACCTCCCTATTCGAAGACCTCGTATCCGAGACC ATCTCCAACACCGCACCCCTACCCGCCCAGATCGCCCAGACAGGAAGTGTCAACCTCACCCGCCGCCAGATCAAC ATGCAAATCGGCGAATTGTTCATCCTCCGGATCAACATTCACCTGCAAGGCTCGGTTCTAGACTCTCCAGAACTT ATGTGGGCCGAGCCCCAACTAGAACCGGTTTACCAGGCCGTCCGCAGTTACCTTGAAATGGACCAGCGCGTAAGC CTGCTCACCGAACGACTGGACGTAATAGCGGATCTTCTCGCCGTCCTCAAAGATCAATTAACTCACCGCCACGGT GAGTATCTTGAATGGATCGTAATTGTTCTTATTGCGGCAGAAATTCTGGTCGCAGCTATCAACATCGTAGTTGAC TTGTACGCTGGCGTGGAGTGA |
Gene | >Ani_SJS100_1|g10392.t1 ATGGTCACCACAGAATCCTCTCCGCTCCTCCCCCAGCATCATCTCCCGAATCCCTCCAATACGTCACCGCGAGGA AACCGTCCGCCGCGGACAGTGACCTTCAACCCATTGGCGACTGTCAGCACTTACCATGACTCGACCTCCGCCGAT CCCACGTTTAGACCTCTCCAGTCCGGCTCCTCATCTGCACCGCATTCTCAGGAGAGCCATTACCGACCGACCGGC CTCTCCGCCCTGAATAGCAAGCTCCGCCGGCGGAACAGCCATGGCGCTCCGTTCAGCACCGCAAACACCCCAATC GCTGCAGCCCCCAAAGTCGGACCGCAAAGAACGACGAAAAATGCCCAAAAACTCAAACTGCTTCCCGATCCGGTG ACTGAGGCCGAGGAGGAGCTCGGTGGAGATGACTTTCCGTCCGATGTCTATTCGCAGATTGCCCGGATCAAAGAA CCCACGGCGAGGAGTCATGCTGCAAAGTTAGGAAAGGCCGACAGAGAGCGTCTGCCGCGAGTGACTGCCTACTGC ACAGCCAATTCTTATCGACTGGAGGGGATAATCAAGTTTCTCAAGTCTCGTTCTAAAACCCGCGGGGCCAACCCG AAGCTCTACGACGAATGTGTCTACTCTCCATATGACTACGGCTATGAGGAAAAGCAGAATGGCACATGGGGTCTT TCGAATAATGGAATGGGCATGGCGGATAGTCACCCTGGTCAACGGCCGTCCAATGAGCGCCGCTACTCGGACAGT GTGGTTGAGGTTCAGGATAACACCAATGCTCGACGGGAAGACCTCATAGATCTACGGGACTCTCAATCCCACTCC ACCGATATAGATCACGCTTCGAGTACTGCTGTGTCAGAAAACCAAGGAGATGTACATCCCGACTTCGACACGACG ATCCATACCCCTGAAGTGTTTCTCTTTGATTACGGCACAGTCGTCATATGGGGCATGTCACCTGCACACGAGTCA CGATTCTTATCCGATGTTTCCAAATTTGCCGCTTCCATCCTCAGCCCCGAAGATACCCAGGTTGAGAACTTCAAT TTCTACTATGCTCGCGAATATCAAGCCCGGATATACAACGACTTTATCTCTCTGCGCGATCCGCGTAACCACATG ATCAAACTGGCCATCTCCCACGCATTGGCTCAATCCGTCAAGACCTCCCTATTCGAAGACCTCGTATCCGAGACC ATCTCCAACACCGCACCCCTACCCGCCCAGATCGCCCAGACAGGAAGTGTCAACCTCACCCGCCGCCAGATCAAC ATGCAAATCGGCGAATTGTTCATCCTCCGGATCAACATTCACCTGCAAGGCTCGGTTCTAGACTCTCCAGAACTT ATGTGGGCCGAGCCCCAACTAGAACCGGTTTACCAGGCCGTCCGCAGTTACCTTGAAATGGACCAGCGCGTAAGC CTGCTCACCGAACGACTGGACGTAATAGCGGATCTTCTCGCCGTCCTCAAAGATCAATTAACTCACCGCCACGGT GAGTATCTTGAATGGATCGGTAAGCCCCTCCCCCGGCGCCCCCTGCATTAACCCGTTCTAATCGACTAACACACA TGACAGTAATTGTTCTTATTGCGGCAGAAATTCTGGTCGCAGCTATCAACATCGTAGTTGACTTGTACGCTGGCG TGGAGTGA |