Protein ID | Ani_SJS100_1|g10377.t1 |
Gene name | |
Location | scaffold_115:3769..5733 |
Strand | - |
Gene length (bp) | 1964 |
Transcript length (bp) | 1452 |
Coding sequence length (bp) | 1452 |
Protein length (aa) | 484 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00206 | Lyase_1 | Lyase | 1.7E-23 | 40 | 301 |
PF10397 | ADSL_C | Adenylosuccinate lyase C-terminus | 5.8E-18 | 375 | 457 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 50 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g10377.t1 MSASNDVYQTPLNSRYSSDEMKYLFSPRNRFSTWRQLWLWLAEAEKELGLPISDEAIEQMKAHLTIQDDEFKVAA EEEKRRRHDVMAHVHAYGNVAPAAAGIIHWGATSCYCTDNADLIFLRDGLDILIPKLAVVIDKLSAFAKQYKDLP CLGFTHGQPAQLVTVGKRASLWIQDLLMDLKNLERARDDLRFRGVKGTTGTQASFLQIFEGNHEKVEQLDELVTE KAGFKSAYIISAQTYSRKIDVDVGNALGSFGSTCERIGIDIRHLAMLKEVEEPFEKDQIGSSAMAYKRNPMRSER LCSLGRHLQNLPKDALDTYSAQWFERSLDDSAIRRISIPELFLSADACLILLNNVTSGFVVYPEVIRRHVNDELP FMATENIIMACVKKGLSRQDAHEEIRVLSHQAADNVKKLGLNNDLLDRVRRTAFFAPILDELDALLDPSTFVGRA PQQVEKFLSTEVKEALKPYEAQVAKAETSALYV* |
Coding | >Ani_SJS100_1|g10377.t1 ATGTCTGCCAGTAACGATGTCTACCAGACCCCTCTCAACTCGCGCTACTCCAGCGACGAGATGAAGTATCTCTTC TCTCCCAGAAACCGTTTCTCTACCTGGAGACAGCTGTGGCTCTGGCTTGCCGAGGCTGAGAAAGAGCTCGGTTTG CCGATCTCCGACGAGGCCATTGAGCAGATGAAGGCTCACCTCACCATTCAGGACGACGAATTCAAGGTTGCCGCA GAGGAGGAGAAGCGCCGTAGACACGATGTCATGGCTCACGTCCATGCCTATGGTAATGTCGCTCCTGCTGCTGCC GGAATCATCCACTGGGGCGCCACCTCCTGCTACTGCACCGACAACGCAGACCTGATCTTCCTCCGTGACGGACTC GATATCCTTATCCCCAAGCTTGCTGTTGTCATTGACAAGCTGTCTGCCTTCGCTAAGCAGTACAAGGACTTGCCC TGCCTGGGCTTCACCCACGGACAGCCCGCTCAGCTTGTTACCGTCGGAAAGCGTGCCTCCCTGTGGATCCAGGAC TTGCTCATGGACCTGAAGAACCTCGAGCGGGCTCGCGATGATCTGCGCTTCCGTGGTGTCAAGGGTACCACCGGT ACTCAGGCCTCTTTCCTCCAGATCTTCGAGGGCAACCATGAGAAGGTTGAGCAGCTGGATGAGCTGGTCACCGAG AAGGCTGGTTTCAAGTCTGCGTACATCATTTCCGCCCAGACCTACTCCCGTAAGATTGATGTCGATGTTGGCAAT GCCCTTGGCTCTTTCGGCTCGACCTGCGAGCGCATTGGCATTGACATTCGTCACTTGGCCATGCTGAAGGAGGTC GAGGAACCTTTCGAGAAGGACCAGATTGGTAGCAGTGCTATGGCTTACAAGCGTAACCCCATGCGGTCCGAGCGT CTGTGCTCCCTCGGAAGACACCTTCAGAACCTCCCCAAGGATGCTCTGGACACCTACTCCGCCCAGTGGTTCGAA CGCTCTCTCGATGATAGTGCTATCCGCCGTATCAGCATCCCCGAACTCTTCCTTTCCGCCGATGCCTGTCTCATC CTTCTGAACAACGTCACCTCCGGCTTTGTTGTCTACCCCGAAGTTATCAGACGCCATGTCAACGATGAGCTGCCC TTCATGGCCACTGAGAACATCATCATGGCCTGTGTGAAGAAGGGTCTGTCCCGTCAGGACGCCCACGAGGAAATC CGTGTCCTCTCCCACCAAGCCGCCGACAACGTCAAGAAGCTCGGCTTGAACAACGACCTGCTCGACCGTGTCCGT CGCACTGCTTTCTTCGCCCCCATCCTGGATGAGCTTGACGCTCTCCTCGACCCCAGCACCTTCGTCGGCCGTGCT CCCCAGCAGGTTGAGAAATTCCTCTCCACCGAAGTGAAGGAGGCTCTCAAGCCCTACGAGGCCCAGGTCGCCAAG GCCGAGACCTCTGCTCTCTACGTATAG |
Transcript | >Ani_SJS100_1|g10377.t1 ATGTCTGCCAGTAACGATGTCTACCAGACCCCTCTCAACTCGCGCTACTCCAGCGACGAGATGAAGTATCTCTTC TCTCCCAGAAACCGTTTCTCTACCTGGAGACAGCTGTGGCTCTGGCTTGCCGAGGCTGAGAAAGAGCTCGGTTTG CCGATCTCCGACGAGGCCATTGAGCAGATGAAGGCTCACCTCACCATTCAGGACGACGAATTCAAGGTTGCCGCA GAGGAGGAGAAGCGCCGTAGACACGATGTCATGGCTCACGTCCATGCCTATGGTAATGTCGCTCCTGCTGCTGCC GGAATCATCCACTGGGGCGCCACCTCCTGCTACTGCACCGACAACGCAGACCTGATCTTCCTCCGTGACGGACTC GATATCCTTATCCCCAAGCTTGCTGTTGTCATTGACAAGCTGTCTGCCTTCGCTAAGCAGTACAAGGACTTGCCC TGCCTGGGCTTCACCCACGGACAGCCCGCTCAGCTTGTTACCGTCGGAAAGCGTGCCTCCCTGTGGATCCAGGAC TTGCTCATGGACCTGAAGAACCTCGAGCGGGCTCGCGATGATCTGCGCTTCCGTGGTGTCAAGGGTACCACCGGT ACTCAGGCCTCTTTCCTCCAGATCTTCGAGGGCAACCATGAGAAGGTTGAGCAGCTGGATGAGCTGGTCACCGAG AAGGCTGGTTTCAAGTCTGCGTACATCATTTCCGCCCAGACCTACTCCCGTAAGATTGATGTCGATGTTGGCAAT GCCCTTGGCTCTTTCGGCTCGACCTGCGAGCGCATTGGCATTGACATTCGTCACTTGGCCATGCTGAAGGAGGTC GAGGAACCTTTCGAGAAGGACCAGATTGGTAGCAGTGCTATGGCTTACAAGCGTAACCCCATGCGGTCCGAGCGT CTGTGCTCCCTCGGAAGACACCTTCAGAACCTCCCCAAGGATGCTCTGGACACCTACTCCGCCCAGTGGTTCGAA CGCTCTCTCGATGATAGTGCTATCCGCCGTATCAGCATCCCCGAACTCTTCCTTTCCGCCGATGCCTGTCTCATC CTTCTGAACAACGTCACCTCCGGCTTTGTTGTCTACCCCGAAGTTATCAGACGCCATGTCAACGATGAGCTGCCC TTCATGGCCACTGAGAACATCATCATGGCCTGTGTGAAGAAGGGTCTGTCCCGTCAGGACGCCCACGAGGAAATC CGTGTCCTCTCCCACCAAGCCGCCGACAACGTCAAGAAGCTCGGCTTGAACAACGACCTGCTCGACCGTGTCCGT CGCACTGCTTTCTTCGCCCCCATCCTGGATGAGCTTGACGCTCTCCTCGACCCCAGCACCTTCGTCGGCCGTGCT CCCCAGCAGGTTGAGAAATTCCTCTCCACCGAAGTGAAGGAGGCTCTCAAGCCCTACGAGGCCCAGGTCGCCAAG GCCGAGACCTCTGCTCTCTACGTATAG |
Gene | >Ani_SJS100_1|g10377.t1 ATGTCTGCCAGTAACGATGTCTACCAGACCCCTCTCAACTCGCGCTACTCCAGTAAGTCTCTCGGATTTACCGCT GGCGATCTCCTGCCCTCATAGTGCGATATCGGACTAATATGACTCCAATCTTCAGGCGACGAGATGAAGTATCTC TTCTCTCCCAGAAACCGTTTCTCTACCTGGAGACAGCTGTGGCTCTGGCTTGCCGAGGCTGAGAAAGGTGATTTA TACTGTCCTCTGTGACGCTTTTGTCACCCTGCTCCCGCTTGCCCGACTAACCCGTACAGAGCTCGGTTTGCCGAT CTCCGACGAGGCCATTGAGCAGATGAAGGCTCACCTCACCATTCAGGACGACGAATTCAAGGTTGCCGCAGAGGA GGAGAAGCGCCGTAGACACGATGTCATGGCTCACGTCCATGCCTATGGTAATGTCGCTCCTGCTGCTGCCGGAAT CATCCACTGGGGCGCCACCTCCTGCTACTGCACCGACAACGCAGACCTGATCTTCCTCCGTGACGGACTCGATAT CCTTATCCCCAAGCTTGCTGTTGTCATTGACAAGCTGTCTGCCTTCGCTAAGCAGTACAAGGACTTGCCCTGCCT GGGCTTCACCCACGGACAGCCCGCTCAGCTTGTTACCGTCGGAAAGCGTGCCTCCCTGTGGATCCAGGACTTGCT CATGGACCTGAAGAACCTCGAGCGGGCTCGCGATGATCTGCGCTTCCGTGGTGTCAAGGGTACCACCGGTACTCA GGCCTCTTTCCTCCAGATCTTCGAGGGCAACCATGAGAAGGTTGAGCAGCTGGATGAGCTGGTCACCGAGAAGGC TGGTTTCAAGTCTGCGTACATCATTTCCGCCCAGACCTACTCCCGTAAGATTGATGTCGATGTTGGCAATGCCCT TGGCTCTTTCGGCTCGACCTGCGAGCGCATTGGCATTGACATTCGTCACTTGGCCATGCTGAAGGAGGTCGAGGA ACCTTTCGAGAAGGACCAGATTGGTAGCAGTGCTATGGTGAGAGAAAAATTCAAGGAACCAATGAGAGCGACAGG AAATACTAACGTGGTTGGTCTGTGCAGGCTTACAAGCGTAACCCCATGCGGTCCGAGCGTCTGTGCTCCCTCGGA AGACACCTTCAGAACCTCCCCAAGGATGCTCTGGACACCTACTCCGCCCAGTGGTTCGAACGCTCTCTCGTAAGT TTGCGAGACGCTCCCCATTATTAGACAGACTTCAACTAACGACATGAACAGGATGATAGTGCTATCCGCCGTATC AGCATCCCCGAACTCTTCCTTTCCGCCGATGCCTGTCTCATCCTTCTGAGTGAGTTTCCAACCTCTTTTCCAATC ATCTCTCCCGATGCTGACAACGATTAGACAACGTCACCTCCGGCTTTGTTGTCTACCCCGAAGTTATCAGACGCC ATGTCAACGATGAGCTGCCCTTCATGGCCACGTAAGTACCCAATGCCTTCATCTCTGCATCGTAACATTTGCTAA CTCAAAGACCACCTACAGTGAGAACGTAAGCCTTCCGCGAGCAGAACCGTCCCTGTCAATAATACTAACCATAAC ATAATAGATCATCATGGCCTGTGTGAAGAAGGGTCTGTCCCGTCAGGACGCCCACGAGGAAATCCGTACGTCGCG CGGCCCCCAAATCAAGTCCCACATCAGCTAGCCCTAACCTAATAACTTCTTGCGCTACAACAGGTGTCCTCTCCC ACCAAGCCGCCGACAACGTCAAGAAGCTCGGCTTGAACAACGACCTGCTCGACCGTGTCCGTCGCACTGCTTTCT TCGCCCCCATCCTGGATGAGCTTGACGCTCTCCTCGACCCCAGCACCTTCGTCGGCCGTGCTCCCCAGCAGGTTG AGAAATTCCTCTCCACCGAAGTGAAGGAGGCTCTCAAGCCCTACGAGGCCCAGGTCGCCAAGGCCGAGACCTCTG CTCTCTACGTATAG |