Protein ID | Ani_SJS100_1|g10308.t1 |
Gene name | |
Location | scaffold_112:52568..54544 |
Strand | + |
Gene length (bp) | 1976 |
Transcript length (bp) | 1908 |
Coding sequence length (bp) | 1908 |
Protein length (aa) | 636 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02518 | HATPase_c | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 5.1E-21 | 118 | 234 |
PF00072 | Response_reg | Response regulator receiver domain | 2.2E-19 | 489 | 604 |
GO Term | Description | Terminal node |
---|---|---|
GO:0000160 | phosphorelay signal transduction system | Yes |
GO:0065007 | biological regulation | No |
GO:0050789 | regulation of biological process | No |
GO:0008150 | biological_process | No |
GO:0035556 | intracellular signal transduction | No |
GO:0050794 | regulation of cellular process | No |
GO:0009987 | cellular process | No |
GO:0007165 | signal transduction | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 69 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g10308.t1 MNQVLDFSKIVSLERTYRSLKRNKTSSTDVKSMDRFSSHLDTYVATDLALLAEEVVEGVCLGHAYGQRSAAPYDQ PVVLPLAQQGQIQPDKETKPKPRSEVEVVVDIAHNDWVYQTQPGALRRIVMNIFGNAMKYTQSGRVSLHLEVTEA SEGRVRRNGVEELVTLTVSDTGKGISEEFLRGRLYTPFAQEDTLAVGTGLGLSIVRSLVKALKGSINIHSRPGEG TIVKVSLPLVRPGPELELEEPVRPVSPSTREQEMLTECRLLRENHVGRRAAILGVDPADASSHPLWSIYSRYLID WYGLELVSWPSGTPVDIILAEEQSLLEGMRPSGDATLPSLLILCNKSVDYTTARSQWASLANVVNIVCRPCGPHK LARSIRRCLDTQSGNTAPHTIELPERPRQTTISSGSDLSPGERLFEISTDTSELAPEMTISSGSTSSAEYPRSQD SDGMDAPLYTINSPLPIRAPSPFKQPILTQTETERRARVLVVDDNSINLNLMLTFMKKRHLAALDSAENGKLAVD AVERAQQGYDIIFMDMSMPVMNGFEATRAIRALEKERGATYKPAVIIALTGLSSSRDESEALTSGVNLFLTKPVS FKEVSRLLTEWEEKGLDDRISMSGQGQGQQGLASS* |
Coding | >Ani_SJS100_1|g10308.t1 ATGAACCAGGTACTCGATTTTAGCAAGATCGTATCGTTGGAACGAACATATCGCAGTCTGAAGCGGAACAAGACA TCGTCCACAGACGTCAAGAGCATGGACCGGTTTTCTTCCCACTTGGACACTTACGTGGCGACCGACTTGGCCCTT CTGGCCGAGGAAGTGGTAGAAGGCGTGTGCCTGGGTCATGCATATGGTCAAAGATCTGCTGCTCCTTACGACCAA CCGGTTGTCTTGCCTCTTGCTCAACAGGGCCAGATCCAGCCCGACAAAGAAACGAAACCGAAACCCCGTTCTGAA GTTGAGGTGGTCGTGGACATTGCTCACAACGACTGGGTCTATCAGACGCAGCCCGGAGCTCTGCGACGTATTGTC ATGAACATCTTTGGCAACGCCATGAAATACACGCAAAGTGGCCGCGTGTCGCTACACTTGGAAGTTACGGAGGCA TCTGAGGGCCGCGTGCGTCGGAATGGTGTCGAAGAGCTAGTGACTTTGACGGTGTCGGACACCGGCAAGGGTATT TCGGAGGAGTTCCTGCGTGGCCGCCTGTACACGCCTTTCGCCCAGGAGGACACGCTTGCAGTCGGCACGGGCCTG GGTCTCTCGATCGTGAGGAGTCTTGTCAAGGCCCTAAAGGGTAGCATCAACATCCATAGCCGGCCGGGCGAGGGA ACCATTGTCAAGGTCTCGTTGCCTCTTGTGCGACCTGGTCCGGAACTGGAGCTGGAAGAACCTGTCCGTCCCGTG TCGCCATCTACGAGAGAGCAGGAGATGTTAACCGAGTGCCGTCTGCTGCGCGAGAATCATGTCGGCCGACGCGCC GCCATTCTTGGCGTGGATCCTGCCGACGCTTCCTCTCATCCGCTATGGTCCATCTACTCGCGTTACCTGATCGAC TGGTACGGCCTCGAGCTTGTTTCGTGGCCGTCGGGCACGCCCGTTGATATCATCCTGGCGGAAGAGCAGAGCCTA TTGGAGGGCATGAGGCCAAGTGGCGACGCGACTCTCCCTTCGCTCTTGATCCTCTGCAACAAATCCGTCGATTAC ACGACCGCGCGTTCGCAATGGGCATCCTTGGCGAACGTGGTAAACATTGTTTGCCGCCCATGTGGACCACACAAG CTCGCTCGCAGCATCCGCAGATGTCTCGATACGCAGAGTGGAAACACAGCGCCACACACCATCGAGCTCCCCGAA CGGCCACGCCAAACTACCATATCCTCCGGAAGCGACCTTTCACCCGGAGAGAGGCTATTCGAAATCTCAACCGAC ACCTCCGAGCTTGCCCCAGAGATGACCATCAGCTCCGGCTCGACCTCATCAGCCGAGTATCCTCGCTCCCAAGAC TCCGACGGCATGGATGCCCCCCTATACACCATCAACTCACCTCTCCCGATCCGTGCTCCATCTCCCTTCAAACAA CCTATTTTAACACAAACCGAAACCGAGCGACGCGCCCGCGTCCTGGTGGTCGATGACAACAGCATCAACCTGAAC CTGATGCTTACATTCATGAAAAAGAGGCACCTCGCTGCTCTCGACTCCGCCGAGAACGGCAAATTAGCCGTCGAC GCAGTCGAACGCGCCCAACAGGGCTACGACATTATCTTCATGGATATGTCCATGCCCGTAATGAACGGCTTCGAA GCCACGCGCGCCATCCGCGCCCTCGAAAAAGAGCGCGGCGCAACGTACAAGCCAGCCGTCATCATCGCATTAACA GGACTGAGCAGCTCGCGCGATGAATCAGAGGCTCTAACCTCGGGCGTTAATCTGTTCCTCACAAAGCCAGTGTCG TTTAAGGAGGTGTCGCGGTTGTTAACGGAGTGGGAGGAGAAGGGATTGGATGATCGGATATCTATGTCGGGACAG GGACAGGGACAGCAGGGGTTGGCGTCTAGTTGA |
Transcript | >Ani_SJS100_1|g10308.t1 ATGAACCAGGTACTCGATTTTAGCAAGATCGTATCGTTGGAACGAACATATCGCAGTCTGAAGCGGAACAAGACA TCGTCCACAGACGTCAAGAGCATGGACCGGTTTTCTTCCCACTTGGACACTTACGTGGCGACCGACTTGGCCCTT CTGGCCGAGGAAGTGGTAGAAGGCGTGTGCCTGGGTCATGCATATGGTCAAAGATCTGCTGCTCCTTACGACCAA CCGGTTGTCTTGCCTCTTGCTCAACAGGGCCAGATCCAGCCCGACAAAGAAACGAAACCGAAACCCCGTTCTGAA GTTGAGGTGGTCGTGGACATTGCTCACAACGACTGGGTCTATCAGACGCAGCCCGGAGCTCTGCGACGTATTGTC ATGAACATCTTTGGCAACGCCATGAAATACACGCAAAGTGGCCGCGTGTCGCTACACTTGGAAGTTACGGAGGCA TCTGAGGGCCGCGTGCGTCGGAATGGTGTCGAAGAGCTAGTGACTTTGACGGTGTCGGACACCGGCAAGGGTATT TCGGAGGAGTTCCTGCGTGGCCGCCTGTACACGCCTTTCGCCCAGGAGGACACGCTTGCAGTCGGCACGGGCCTG GGTCTCTCGATCGTGAGGAGTCTTGTCAAGGCCCTAAAGGGTAGCATCAACATCCATAGCCGGCCGGGCGAGGGA ACCATTGTCAAGGTCTCGTTGCCTCTTGTGCGACCTGGTCCGGAACTGGAGCTGGAAGAACCTGTCCGTCCCGTG TCGCCATCTACGAGAGAGCAGGAGATGTTAACCGAGTGCCGTCTGCTGCGCGAGAATCATGTCGGCCGACGCGCC GCCATTCTTGGCGTGGATCCTGCCGACGCTTCCTCTCATCCGCTATGGTCCATCTACTCGCGTTACCTGATCGAC TGGTACGGCCTCGAGCTTGTTTCGTGGCCGTCGGGCACGCCCGTTGATATCATCCTGGCGGAAGAGCAGAGCCTA TTGGAGGGCATGAGGCCAAGTGGCGACGCGACTCTCCCTTCGCTCTTGATCCTCTGCAACAAATCCGTCGATTAC ACGACCGCGCGTTCGCAATGGGCATCCTTGGCGAACGTGGTAAACATTGTTTGCCGCCCATGTGGACCACACAAG CTCGCTCGCAGCATCCGCAGATGTCTCGATACGCAGAGTGGAAACACAGCGCCACACACCATCGAGCTCCCCGAA CGGCCACGCCAAACTACCATATCCTCCGGAAGCGACCTTTCACCCGGAGAGAGGCTATTCGAAATCTCAACCGAC ACCTCCGAGCTTGCCCCAGAGATGACCATCAGCTCCGGCTCGACCTCATCAGCCGAGTATCCTCGCTCCCAAGAC TCCGACGGCATGGATGCCCCCCTATACACCATCAACTCACCTCTCCCGATCCGTGCTCCATCTCCCTTCAAACAA CCTATTTTAACACAAACCGAAACCGAGCGACGCGCCCGCGTCCTGGTGGTCGATGACAACAGCATCAACCTGAAC CTGATGCTTACATTCATGAAAAAGAGGCACCTCGCTGCTCTCGACTCCGCCGAGAACGGCAAATTAGCCGTCGAC GCAGTCGAACGCGCCCAACAGGGCTACGACATTATCTTCATGGATATGTCCATGCCCGTAATGAACGGCTTCGAA GCCACGCGCGCCATCCGCGCCCTCGAAAAAGAGCGCGGCGCAACGTACAAGCCAGCCGTCATCATCGCATTAACA GGACTGAGCAGCTCGCGCGATGAATCAGAGGCTCTAACCTCGGGCGTTAATCTGTTCCTCACAAAGCCAGTGTCG TTTAAGGAGGTGTCGCGGTTGTTAACGGAGTGGGAGGAGAAGGGATTGGATGATCGGATATCTATGTCGGGACAG GGACAGGGACAGCAGGGGTTGGCGTCTAGTTGA |
Gene | >Ani_SJS100_1|g10308.t1 ATGAACCAGGTACTCGATTTTAGCAAGATCGTATCGTTGGAACGAACATATCGCAGTCTGAAGCGGAACAAGACA TCGTCCACAGACGTCAAGAGCATGGACCGGTTTTCTTCCCACTTGGACACTTACGTGGCGACCGACTTGGCCCTT CTGGCCGAGGAAGTGGTAGAAGGCGTGTGCCTGGGTCATGCATATGGTCAAAGATCTGCTGCTCCTTACGACCAA CCGGTTGTCTTGCCTCTTGCTCAACAGGGCCAGATCCAGCCCGACAAAGAAACGAAACCGAAACCCCGTTCTGAA GTTGAGGTGGTCGTGGACATTGCTCACAACGACTGGGTCTATCAGACGCAGCCCGGAGCTCTGCGACGTATTGTC ATGAACATCTTTGGCAACGCCATGAAATACACGCAAAGTGGCCGCGTGTCGCTACACTTGGAAGTTACGGAGGCA TCTGAGGGCCGCGTGCGTCGGAATGGTGTCGAAGAGCTAGTGACTTTGACGGTGTCGGACACCGGCAAGGGTATT TCGGAGGAGTTCCTGCGTGGCCGCCTGTACACGCCTTTCGCCCAGGAGGACACGCTTGCAGTCGGCACGGGCCTG GGTCTCTCGATCGTGAGGAGTCTTGTCAAGGCCCTAAAGGGTAGCATCAACATCCATAGCCGGCCGGGCGAGGGA ACCATTGTCAAGGTCTCGTTGCCTCTTGTGCGACCTGGTCCGGAACTGGAGCTGGAAGAACCTGTCCGTCCCGTG TCGCCATCTACGAGAGAGCAGGAGATGTTAACCGAGTGCCGTCTGCTGCGCGAGAATCATGTCGGCCGACGCGCC GCCATTCTTGGCGTGGATCCTGCCGACGCTTCCTCTCATCCGCTATGGTCCATCTACTCGCGTTACCTGATCGAC TGGTACGGCCTCGAGCTTGTTTCGTGGCCGTCGGGCACGCCCGTTGATATCATCCTGGCGGAAGAGCAGAGCCTA TTGGAGGGCATGAGGCCAAGTGGCGACGCGACTCTCCCTTCGCTCTTGATCCTCTGCAACAAATCCGTCGATTAC ACGACCGCGCGTTCGCAATGGGCATCCTTGGCGAACGTGGTAAACATTGTTTGCCGCCCATGTGGACCACACAAG CTCGCTCGCAGCATCCGCAGATGTCTCGATACGCAGAGTGGAAACACAGCGCCACACACCATCGAGCTCCCCGAA CGGCCACGCCAAACTACCATATCCTCCGGAAGCGACCTTTCACCCGGAGAGAGGCTATTCGAAATCTCAACCGAC ACCTCCGAGCTTGCCCCAGAGATGACCATCAGCTCCGGCTCGACCTCATCAGCCGAGTATCCTCGCTCCCAAGAC TCCGACGGCATGGATGCCCCCCTATACACCATCAACTCACCTCTCCCGATCCGTGCTCCATCTCCCTTCAAACAA CCTATTTTAACACAAACCGAAACCGAGCGACGCGCCCGCGTCCTGGTGGTCGATGACAACAGCATCAACCTGAAC CTGATGCTTACATTCATGAAAAAGAGGCACCTCGCTGCTCTCGACTCCGCCGAGAACGGCAAATTAGCCGTCGAC GCAGTCGAACGCGCCCAACAGGGCTACGACATTATCTTCATGGGTTAGTCCCCCTCTCGTCCCCAACTTTACAGA TACACTTCATCCATACTAACAAAAAAATGAATACAGATATGTCCATGCCCGTAATGAACGGCTTCGAAGCCACGC GCGCCATCCGCGCCCTCGAAAAAGAGCGCGGCGCAACGTACAAGCCAGCCGTCATCATCGCATTAACAGGACTGA GCAGCTCGCGCGATGAATCAGAGGCTCTAACCTCGGGCGTTAATCTGTTCCTCACAAAGCCAGTGTCGTTTAAGG AGGTGTCGCGGTTGTTAACGGAGTGGGAGGAGAAGGGATTGGATGATCGGATATCTATGTCGGGACAGGGACAGG GACAGCAGGGGTTGGCGTCTAGTTGA |